RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Spatc1Q148B6 480 aa14.32□□□□□ -0.12
Trim28-201ENSMUST00000005705 Rnf150Q5DTZ6 437 aa14.32□□□□□ -0.12
Trim28-201ENSMUST00000005705 Ceacam14Q78Y72 263 aa14.32□□□□□ -0.12
Trim28-201ENSMUST00000005705 Olfr1162Q7TR28 314 aa14.32□□□□□ -0.12
Trim28-201ENSMUST00000005705 Olfr1113Q7TR54 326 aa14.32□□□□□ -0.12
Trim28-201ENSMUST00000005705 Vrk3Q8K3G5 453 aa14.32□□□□□ -0.12
Trim28-201ENSMUST00000005705 Med25Q8VCB2 745 aa14.32□□□□□ -0.12
Trim28-201ENSMUST00000005705 Olfr1347Q8VF33 319 aa14.32□□□□□ -0.12
Trim28-201ENSMUST00000005705 Olfr1099Q8VG37 312 aa14.32□□□□□ -0.12
Trim28-201ENSMUST00000005705 Polr2hQ923G2 150 aa14.32□□□□□ -0.12
Trim28-201ENSMUST00000005705 Dusp13Q9QYJ7 198 aa14.32□□□□□ -0.12
Trim28-201ENSMUST00000005705 Trip12G5E870 2025 aaKnown RBP14.32□□□□□ -0.12
Trim28-201ENSMUST00000005705 Gm14409A2ARR8 349 aa14.32□□□□□ -0.12
Trim28-201ENSMUST00000005705 Tbx15O70306 602 aa14.32□□□□□ -0.12
Trim28-201ENSMUST00000005705 Oprm1P42866 398 aa14.32□□□□□ -0.12
Trim28-201ENSMUST00000005705 Capza1P47753 286 aa14.32□□□□□ -0.12
Trim28-201ENSMUST00000005705 Olfr18Q0VAX9 331 aa14.32□□□□□ -0.12
Trim28-201ENSMUST00000005705 Olfr3Q60879 313 aa14.32□□□□□ -0.12
Trim28-201ENSMUST00000005705 DdiasQ6NZG4 898 aa14.32□□□□□ -0.12
Trim28-201ENSMUST00000005705 Olfr1277Q8VF41 303 aa14.32□□□□□ -0.12
Trim28-201ENSMUST00000005705 Pla1aQ8VI78 456 aa14.32□□□□□ -0.12
Trim28-201ENSMUST00000005705 Ddb2Q99J79 432 aa14.32□□□□□ -0.12
Trim28-201ENSMUST00000005705 Spaca7Q9D2S4 182 aa14.32□□□□□ -0.12
Trim28-201ENSMUST00000005705 Samt4Q9D4X6 233 aa14.32□□□□□ -0.12
Trim28-201ENSMUST00000005705 Tceal6Q9DB24 200 aa14.32□□□□□ -0.12
Trim28-201ENSMUST00000005705 Zc3h8Q9JJ48 305 aaKnown RBP14.32□□□□□ -0.12
Trim28-201ENSMUST00000005705 Nkain4Q9JMG4 208 aa14.32□□□□□ -0.12
Trim28-201ENSMUST00000005705 Myo15bI7HPW8 3033 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Gm28870A0A0A6YW38 222 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Fam98cE9PYD1 344 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Gstp3F6RWR5 210 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Zfp977L7N2E7 438 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Olfr329-psM9MMK4 331 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Htr2aP35363 471 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 S1pr2P52592 352 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Cpt2P52825 658 aaKnown RBP14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Defb46Q4QY34 57 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Olfr331Q5NC44 324 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Taf9bQ6NZA9 249 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Igsf21Q7TNR6 468 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 TMEM229BQ8BFQ2 167 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Gm9999Q8C5Y2 53 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Arl6ip5Q8R5J9 188 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 RhovQ8VDU1 236 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Olfr969Q8VG89 311 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Edem1Q925U4 652 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Il17bQ9QXT6 180 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Gm884A2A9H6 3643 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Olfr455A0A0B4J1M2 317 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Gm4131A0A140LJ24 318 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Dgat2l6A2ADU8 337 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Olfr430E9Q5F1 317 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Cnr1P47746 473 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Rab5bP61021 215 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 NfybP63139 207 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Hist1h2baP70696 127 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Slc38a11Q3USY0 453 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Csnk2a1Q60737 391 aaKnown RBP14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Zfp663Q6NXM6 656 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Fbxo22Q78JE5 402 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Vash2Q8C5G2 355 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Depp1Q8K2F3 205 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Olfr502Q8VG09 314 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Olfr974Q8VH09 310 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Mcts2Q9CQ21 181 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Fn3kQ9ER35 309 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Gpx2Q9JHC0 190 aa14.31□□□□□ -0.12
Trim28-201ENSMUST00000005705 Gm38303A0A0A6YWW8 100 aa14.3□□□□□ -0.12
Trim28-201ENSMUST00000005705 Trav12-2A0N8N6 114 aa14.3□□□□□ -0.12
Trim28-201ENSMUST00000005705 Esp16A8R0U9 85 aa14.3□□□□□ -0.12
Trim28-201ENSMUST00000005705 Cisd3B1AR13 137 aa14.3□□□□□ -0.12
Trim28-201ENSMUST00000005705 C1ql1O88992 258 aa14.3□□□□□ -0.12
Trim28-201ENSMUST00000005705 P01637 128 aa14.3□□□□□ -0.12
Trim28-201ENSMUST00000005705 Fgf4P11403 202 aa14.3□□□□□ -0.12
Trim28-201ENSMUST00000005705 Kcng3P59053 433 aa14.3□□□□□ -0.12
Trim28-201ENSMUST00000005705 Scand1Q2M4I6 142 aa14.3□□□□□ -0.12
Trim28-201ENSMUST00000005705 Ptpmt1Q66GT5 193 aa14.3□□□□□ -0.12
Trim28-201ENSMUST00000005705 Fam117aQ7TNF9 451 aa14.3□□□□□ -0.12
Trim28-201ENSMUST00000005705 Eif5a2Q8BGY2 153 aaKnown RBP14.3□□□□□ -0.12
Trim28-201ENSMUST00000005705 Hsd17b13Q8VCR2 304 aa14.3□□□□□ -0.12
Trim28-201ENSMUST00000005705 Olfr279Q8VFD8 310 aa14.3□□□□□ -0.12
Trim28-201ENSMUST00000005705 Atp23Q9CWQ3 201 aa14.3□□□□□ -0.12
Trim28-201ENSMUST00000005705 Tspan32Q9JHH2 256 aa14.3□□□□□ -0.12
Trim28-201ENSMUST00000005705 MokQ9WVS4 420 aa14.3□□□□□ -0.12
Trim28-201ENSMUST00000005705 Sptbn2Q68FG2 2388 aa14.3□□□□□ -0.12
Trim28-201ENSMUST00000005705 Arhgap21Q6DFV3 1944 aa14.3□□□□□ -0.12
Trim28-201ENSMUST00000005705 Zfp69A2A761 587 aa14.3□□□□□ -0.12
Trim28-201ENSMUST00000005705 H2-M1F7CXU4 344 aa14.3□□□□□ -0.12
Trim28-201ENSMUST00000005705 AhsgP29699 345 aa14.3□□□□□ -0.12
Trim28-201ENSMUST00000005705 Cuzd1P70412 606 aa14.3□□□□□ -0.12
Trim28-201ENSMUST00000005705 Mrgprb2Q3KNA1 338 aa14.3□□□□□ -0.12
Trim28-201ENSMUST00000005705 Zfp955aQ80XR7 545 aa14.3□□□□□ -0.12
Trim28-201ENSMUST00000005705 CyrenQ8BHZ5 157 aa14.3□□□□□ -0.12
Trim28-201ENSMUST00000005705 Olfr1086Q8VFL9 310 aa14.3□□□□□ -0.12
Trim28-201ENSMUST00000005705 Olfr1138Q8VFQ9 311 aa14.3□□□□□ -0.12
Trim28-201ENSMUST00000005705 Tmem205Q91XE8 189 aa14.3□□□□□ -0.12
Trim28-201ENSMUST00000005705 Slc30a7Q9JKN1 378 aa14.3□□□□□ -0.12
Trim28-201ENSMUST00000005705 TpbgQ9Z0L0 426 aa14.3□□□□□ -0.12
Trim28-201ENSMUST00000005705 Akap9Q70FJ1 3797 aa14.3□□□□□ -0.12
Trim28-201ENSMUST00000005705 Spink14B9EJP9 96 aa14.3□□□□□ -0.12
Retrieved 100 of 22,080 RNA–protein pairs in 39.7 ms