RNA–Protein interactions for RNA: YDL085W

NDE2, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE2, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE2YDL085W YNL108CP53929 270 aa8.2□□□□□ -1.1
NDE2YDL085W YMR321CQ04898 105 aa8.2□□□□□ -1.1
NDE2YDL085W SHS1Q07657 551 aa8.2□□□□□ -1.1
NDE2YDL085W RIB2Q12362 591 aaKnown RBP8.2□□□□□ -1.1
NDE2YDL085W BI3Q9ZZW7 517 aa8.2□□□□□ -1.1
NDE2YDL085W GAL10P04397 699 aa8.19□□□□□ -1.1
NDE2YDL085W ASP3-2P0CX77 362 aa8.19□□□□□ -1.1
NDE2YDL085W ASP3-3P0CX78 362 aa8.19□□□□□ -1.1
NDE2YDL085W ASP3-4P0CX79 362 aa8.19□□□□□ -1.1
NDE2YDL085W ASP3-1P0CZ17 362 aa8.19□□□□□ -1.1
NDE2YDL085W HEM15P16622 393 aa8.19□□□□□ -1.1
NDE2YDL085W PWP1P21304 576 aaKnown RBP8.19□□□□□ -1.1
NDE2YDL085W TMT1P32643 299 aa8.19□□□□□ -1.1
NDE2YDL085W GYP6P32806 458 aa8.19□□□□□ -1.1
NDE2YDL085W RGT1P32862 1170 aa8.19□□□□□ -1.1
NDE2YDL085W CBF5P33322 483 aaKnown RBP RIP-Chip data8.19□□□□□ -1.1not detected
NDE2YDL085W PTC3P34221 468 aaKnown RBP8.19□□□□□ -1.1
NDE2YDL085W HSM3P38348 480 aa8.19□□□□□ -1.1
NDE2YDL085W BSD2P38356 321 aa8.19□□□□□ -1.1
NDE2YDL085W REV7P38927 245 aa8.19□□□□□ -1.1
NDE2YDL085W SAH1P39954 449 aaKnown RBP8.19□□□□□ -1.1
NDE2YDL085W YIL001WP40560 513 aa8.19□□□□□ -1.1
NDE2YDL085W EMW1P42842 904 aaKnown RBP8.19□□□□□ -1.1
NDE2YDL085W SNZ3P43545 298 aa8.19□□□□□ -1.1
NDE2YDL085W SNZ2P53824 298 aa8.19□□□□□ -1.1
NDE2YDL085W THI7Q05998 598 aa8.19□□□□□ -1.1
NDE2YDL085W TDA5Q06417 326 aaKnown RBP8.19□□□□□ -1.1
NDE2YDL085W GPN2Q08726 347 aaPredicted RBP8.19□□□□□ -1.1
NDE2YDL085W YDR018CQ12185 396 aa8.19□□□□□ -1.1
NDE2YDL085W GCD2P12754 651 aaPredicted RBP8.18□□□□□ -1.1
NDE2YDL085W CBF1P17106 351 aa8.18□□□□□ -1.1
NDE2YDL085W TRX1P22217 103 aaKnown RBP8.18□□□□□ -1.1
NDE2YDL085W CLB4P24871 460 aa8.18□□□□□ -1.1
NDE2YDL085W KAR4P25583 335 aa8.18□□□□□ -1.1
NDE2YDL085W SMY2P32909 740 aaKnown RBP8.18□□□□□ -1.1
NDE2YDL085W SET3P36124 751 aa8.18□□□□□ -1.1
NDE2YDL085W YBR032WP38223 100 aa8.18□□□□□ -1.1
NDE2YDL085W YIL089WP40500 205 aa8.18□□□□□ -1.1
NDE2YDL085W AXL1P40851 1208 aa8.18□□□□□ -1.1
NDE2YDL085W TAF6P53040 516 aa8.18□□□□□ -1.1
NDE2YDL085W TAN1P53072 289 aaPredicted RBP8.18□□□□□ -1.1
NDE2YDL085W MNP1P53163 194 aaPredicted RBP8.18□□□□□ -1.1
NDE2YDL085W YNL040WP53960 456 aaPredicted RBP8.18□□□□□ -1.1
NDE2YDL085W KTR5P53966 522 aaPredicted RBP8.18□□□□□ -1.1
NDE2YDL085W GPD1Q00055 391 aaKnown RBP8.18□□□□□ -1.1
NDE2YDL085W GTB1Q04924 702 aa8.18□□□□□ -1.1
NDE2YDL085W KAP95Q06142 861 aaKnown RBP8.18□□□□□ -1.1
NDE2YDL085W PUS5Q06244 254 aa8.18□□□□□ -1.1
NDE2YDL085W OSW1Q08692 278 aa8.18□□□□□ -1.1
NDE2YDL085W PCD1Q12524 340 aa8.18□□□□□ -1.1
NDE2YDL085W WHI2P12611 486 aa8.18□□□□□ -1.1
NDE2YDL085W AFT1P22149 690 aa8.18□□□□□ -1.1
NDE2YDL085W EFB1P32471 206 aaKnown RBP8.18□□□□□ -1.1
NDE2YDL085W ZUO1P32527 433 aaKnown RBP8.18□□□□□ -1.1
NDE2YDL085W TOA1P32773 286 aa8.18□□□□□ -1.1
NDE2YDL085W YME2P32843 850 aa8.18□□□□□ -1.1
NDE2YDL085W SWC5P38326 303 aa8.18□□□□□ -1.1
NDE2YDL085W MXR1P40029 184 aa8.18□□□□□ -1.1
NDE2YDL085W SIP5P40210 489 aaKnown RBP8.18□□□□□ -1.1
NDE2YDL085W MDJ2P42834 146 aa8.18□□□□□ -1.1
NDE2YDL085W MND1P53102 219 aa8.18□□□□□ -1.1
NDE2YDL085W YGL036WP53185 909 aaPredicted RBP8.18□□□□□ -1.1
NDE2YDL085W ERP6P53198 216 aa8.18□□□□□ -1.1
NDE2YDL085W CUS1Q02554 436 aaPredicted RBP8.18□□□□□ -1.1
NDE2YDL085W SPO19Q03029 223 aa8.18□□□□□ -1.1
NDE2YDL085W JIP4Q03361 876 aa8.18□□□□□ -1.1
NDE2YDL085W CDC73Q06697 393 aa8.18□□□□□ -1.1
NDE2YDL085W FAP7Q12055 197 aaPredicted RBP8.18□□□□□ -1.1
NDE2YDL085W CMD1P06787 147 aaKnown RBP8.17□□□□□ -1.1
NDE2YDL085W MGT1P26188 188 aa8.17□□□□□ -1.1
NDE2YDL085W MSR1P38714 643 aa8.17□□□□□ -1.1
NDE2YDL085W SPC97P38863 823 aa8.17□□□□□ -1.1
NDE2YDL085W SPR3P41901 512 aa8.17□□□□□ -1.1
NDE2YDL085W SAE2P46946 345 aa8.17□□□□□ -1.1
NDE2YDL085W ISM1P48526 1002 aa8.17□□□□□ -1.1
NDE2YDL085W PCL10P53124 433 aa8.17□□□□□ -1.1
NDE2YDL085W YLR455WQ06188 304 aa8.17□□□□□ -1.1
NDE2YDL085W YOR059CQ08448 450 aaKnown RBP8.17□□□□□ -1.1
NDE2YDL085W RRD2Q12461 358 aa8.17□□□□□ -1.1
NDE2YDL085W PUT4P15380 627 aa8.16□□□□□ -1.1
NDE2YDL085W SLY1P22213 666 aa8.16□□□□□ -1.1
NDE2YDL085W SEC1P30619 724 aaKnown RBP8.16□□□□□ -1.1
NDE2YDL085W BUD2P33314 1104 aa8.16□□□□□ -1.1
NDE2YDL085W CBR1P38626 284 aaKnown RBP8.16□□□□□ -1.1
NDE2YDL085W YHR054CP38780 354 aa8.16□□□□□ -1.1
NDE2YDL085W RSC30P38781 883 aa8.16□□□□□ -1.1
NDE2YDL085W QNS1P38795 714 aaKnown RBP8.16□□□□□ -1.1
NDE2YDL085W UBP6P43593 499 aaKnown RBP8.16□□□□□ -1.1
NDE2YDL085W RTA1P53047 317 aa8.16□□□□□ -1.1
NDE2YDL085W REC107P21651 314 aa8.15□□□□□ -1.1
NDE2YDL085W YUR1P26725 428 aa8.15□□□□□ -1.1
NDE2YDL085W TPS2P31688 896 aaKnown RBP8.15□□□□□ -1.1
NDE2YDL085W RPS0AP32905 252 aaKnown RBP8.15□□□□□ -1.1
NDE2YDL085W TFC3P34111 1160 aa8.15□□□□□ -1.1
NDE2YDL085W GPT2P36148 743 aa8.15□□□□□ -1.1
NDE2YDL085W DUG2P38149 878 aa8.15□□□□□ -1.1
NDE2YDL085W ERP5P38819 212 aa8.15□□□□□ -1.1
NDE2YDL085W LIN1P38852 340 aaPredicted RBP8.15□□□□□ -1.1
NDE2YDL085W KHA1P40309 873 aa8.15□□□□□ -1.1
NDE2YDL085W ALA1P40825 983 aaKnown RBP8.15□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms