RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 ARAP2Q8WZ64 1704 aa20.01■□□□□ 0.79
PHGDH-229ENST00000641891 LPIN2Q92539 896 aa20.01■□□□□ 0.79
PHGDH-229ENST00000641891 WWC3Q9ULE0 1092 aa20.01■□□□□ 0.79
PHGDH-229ENST00000641891 NIP7Q9Y221 180 aaKnown RBP eCLIP20.01■□□□□ 0.79
PHGDH-229ENST00000641891 ELP1O95163 1332 aa20■□□□□ 0.79
PHGDH-229ENST00000641891 LIG1P18858 919 aa20■□□□□ 0.79
PHGDH-229ENST00000641891 LEO1Q8WVC0 666 aaPredicted RBP20■□□□□ 0.79
PHGDH-229ENST00000641891 SPATA32Q96LK8 384 aa20■□□□□ 0.79
PHGDH-229ENST00000641891 AK7Q96M32 723 aa20■□□□□ 0.79
PHGDH-229ENST00000641891 ZNF532Q9HCE3 1301 aa20■□□□□ 0.79
PHGDH-229ENST00000641891 NTSR2O95665 410 aa20■□□□□ 0.79
PHGDH-229ENST00000641891 BARGINQ6ZT62 677 aa20■□□□□ 0.79
PHGDH-229ENST00000641891 COL4A1P02462 1669 aa19.99■□□□□ 0.79
PHGDH-229ENST00000641891 LETM1O95202 739 aaPredicted RBP19.99■□□□□ 0.79
PHGDH-229ENST00000641891 TTF1Q15361 905 aaPredicted RBP19.99■□□□□ 0.79
PHGDH-229ENST00000641891 MB21D2Q8IYB1 491 aaPredicted RBP19.99■□□□□ 0.79
PHGDH-229ENST00000641891 ZNF274Q96GC6 653 aaPredicted RBP19.99■□□□□ 0.79
PHGDH-229ENST00000641891 MPHOSPH8Q99549 860 aa19.99■□□□□ 0.79
PHGDH-229ENST00000641891 NBPF3Q9H094 633 aa19.99■□□□□ 0.79
PHGDH-229ENST00000641891 DENND2AQ9ULE3 1009 aa19.99■□□□□ 0.79
PHGDH-229ENST00000641891 ATRNO75882 1429 aa19.99■□□□□ 0.79
PHGDH-229ENST00000641891 SALL1Q9NSC2 1324 aa19.99■□□□□ 0.79
PHGDH-229ENST00000641891 PRC1O43663 620 aa19.98■□□□□ 0.79
PHGDH-229ENST00000641891 PDE6AP16499 860 aa19.98■□□□□ 0.79
PHGDH-229ENST00000641891 KCNQ4P56696 695 aa19.98■□□□□ 0.79
PHGDH-229ENST00000641891 ANTXR2P58335 489 aa19.98■□□□□ 0.79
PHGDH-229ENST00000641891 ZSCAN25Q6NSZ9 544 aa19.98■□□□□ 0.79
PHGDH-229ENST00000641891 NKX2-3Q8TAU0 364 aa19.98■□□□□ 0.79
PHGDH-229ENST00000641891 FUCA2Q9BTY2 467 aa19.98■□□□□ 0.79
PHGDH-229ENST00000641891 SCAND2PQ9GZW5 306 aaPredicted RBP19.98■□□□□ 0.79
PHGDH-229ENST00000641891 CICQ96RK0 1608 aaPredicted RBP19.98■□□□□ 0.79
PHGDH-229ENST00000641891 ZNF213O14771 459 aa19.98■□□□□ 0.79
PHGDH-229ENST00000641891 UQCRFS1P1P0C7P4 283 aa19.98■□□□□ 0.79
PHGDH-229ENST00000641891 FAM98CQ17RN3 349 aaKnown RBP19.98■□□□□ 0.79
PHGDH-229ENST00000641891 TCRBV5S4A2TA0A5A2 114 aa19.97■□□□□ 0.79
PHGDH-229ENST00000641891 SLC5A1P13866 664 aa19.97■□□□□ 0.79
PHGDH-229ENST00000641891 PARP10Q53GL7 1025 aa19.97■□□□□ 0.79
PHGDH-229ENST00000641891 RAB11FIP4Q86YS3 637 aa19.97■□□□□ 0.79
PHGDH-229ENST00000641891 HMGN5P82970 282 aaKnown RBP19.97■□□□□ 0.79
PHGDH-229ENST00000641891 GUCY1B3Q02153 619 aa19.97■□□□□ 0.79
PHGDH-229ENST00000641891 RASGRF1Q13972 1273 aa19.97■□□□□ 0.79
PHGDH-229ENST00000641891 UBE3CQ15386 1083 aa19.97■□□□□ 0.79
PHGDH-229ENST00000641891 SPATA5Q8NB90 893 aa19.97■□□□□ 0.79
PHGDH-229ENST00000641891 COL5A3P25940 1745 aaPredicted RBP19.96■□□□□ 0.79
PHGDH-229ENST00000641891 MCM5P33992 734 aa19.96■□□□□ 0.79
PHGDH-229ENST00000641891 CCDC152Q4G0S7 254 aa19.96■□□□□ 0.79
PHGDH-229ENST00000641891 SMIM5Q71RC9 77 aa19.96■□□□□ 0.79
PHGDH-229ENST00000641891 ZSCAN30Q86W11 494 aa19.96■□□□□ 0.79
PHGDH-229ENST00000641891 TBC1D10CQ8IV04 446 aa19.96■□□□□ 0.79
PHGDH-229ENST00000641891 FBXL16Q8N461 479 aa19.96■□□□□ 0.79
PHGDH-229ENST00000641891 APPP05067 770 aa19.95■□□□□ 0.78
PHGDH-229ENST00000641891 LINC00116Q8NCU8 138 aa19.95■□□□□ 0.78
PHGDH-229ENST00000641891 NCOA7Q8NI08 942 aa19.95■□□□□ 0.78
PHGDH-229ENST00000641891 PGBD1Q96JS3 809 aa19.95■□□□□ 0.78
PHGDH-229ENST00000641891 LAMB2P55268 1798 aa19.95■□□□□ 0.78
PHGDH-229ENST00000641891 KLF18A0A0U1RQI7 1052 aa19.95■□□□□ 0.78
PHGDH-229ENST00000641891 EVCP57679 992 aa19.95■□□□□ 0.78
PHGDH-229ENST00000641891 CEBPZQ03701 1054 aaKnown RBP19.95■□□□□ 0.78
PHGDH-229ENST00000641891 CAMK4Q16566 473 aa19.95■□□□□ 0.78
PHGDH-229ENST00000641891 NAA16Q6N069 864 aaPredicted RBP19.95■□□□□ 0.78
PHGDH-229ENST00000641891 RALYLQ86SE5 291 aaKnown RBP19.95■□□□□ 0.78
PHGDH-229ENST00000641891 FTOQ9C0B1 505 aaKnown RBP eCLIP19.95■□□□□ 0.78
PHGDH-229ENST00000641891 ZSCAN16Q9H4T2 348 aaPredicted RBP19.95■□□□□ 0.78
PHGDH-229ENST00000641891 CARMIL3Q8ND23 1372 aa19.94■□□□□ 0.78
PHGDH-229ENST00000641891 FDPSP14324 419 aaKnown RBP19.94■□□□□ 0.78
PHGDH-229ENST00000641891 HPS5Q9UPZ3 1129 aa19.94■□□□□ 0.78
PHGDH-229ENST00000641891 BCORQ6W2J9 1755 aa19.94■□□□□ 0.78
PHGDH-229ENST00000641891 MYH15Q9Y2K3 1946 aa19.94■□□□□ 0.78
PHGDH-229ENST00000641891 GOLGA6L4A6NEF3 574 aa19.94■□□□□ 0.78
PHGDH-229ENST00000641891 GOLGA8BA8MQT2 603 aa19.94■□□□□ 0.78
PHGDH-229ENST00000641891 ADD1P35611 737 aaKnown RBP19.94■□□□□ 0.78
PHGDH-229ENST00000641891 BCAMP50895 628 aa19.94■□□□□ 0.78
PHGDH-229ENST00000641891 PTF1AQ7RTS3 328 aa19.94■□□□□ 0.78
PHGDH-229ENST00000641891 SMARCC1Q92922 1105 aaPredicted RBP19.94■□□□□ 0.78
PHGDH-229ENST00000641891 DACT1Q9NYF0 836 aa19.94■□□□□ 0.78
PHGDH-229ENST00000641891 IGHMBP2P38935 993 aaKnown RBP19.93■□□□□ 0.78
PHGDH-229ENST00000641891 C3orf67Q6ZVT6 689 aa19.93■□□□□ 0.78
PHGDH-229ENST00000641891 MAGEB6Q8N7X4 407 aa19.93■□□□□ 0.78
PHGDH-229ENST00000641891 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.93■□□□□ 0.78
PHGDH-229ENST00000641891 STRBPQ96SI9 672 aaKnown RBP19.93■□□□□ 0.78
PHGDH-229ENST00000641891 NUP62CLQ9H1M0 184 aa19.93■□□□□ 0.78
PHGDH-229ENST00000641891 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.93■□□□□ 0.78
PHGDH-229ENST00000641891 USP25Q9UHP3 1055 aa19.93■□□□□ 0.78
PHGDH-229ENST00000641891 DOCK2Q92608 1830 aa19.92■□□□□ 0.78
PHGDH-229ENST00000641891 CHRNDQ07001 517 aa19.92■□□□□ 0.78
PHGDH-229ENST00000641891 HS1BP3Q53T59 392 aa19.92■□□□□ 0.78
PHGDH-229ENST00000641891 CYB5R4Q7L1T6 521 aa19.92■□□□□ 0.78
PHGDH-229ENST00000641891 AIDAQ96BJ3 306 aa19.92■□□□□ 0.78
PHGDH-229ENST00000641891 RTL9Q8NET4 1388 aa19.92■□□□□ 0.78
PHGDH-229ENST00000641891 ERFEQ4G0M1 354 aa19.91■□□□□ 0.78
PHGDH-229ENST00000641891 ILDR1Q86SU0 546 aaPredicted RBP19.91■□□□□ 0.78
PHGDH-229ENST00000641891 BICD2Q8TD16 824 aa19.91■□□□□ 0.78
PHGDH-229ENST00000641891 C8orf37Q96NL8 207 aa19.91■□□□□ 0.78
PHGDH-229ENST00000641891 INCENPQ9NQS7 918 aa19.91■□□□□ 0.78
PHGDH-229ENST00000641891 KIF3AQ9Y496 699 aa19.91■□□□□ 0.78
PHGDH-229ENST00000641891 NR1I2O75469 434 aa19.91■□□□□ 0.78
PHGDH-229ENST00000641891 MBD4O95243 580 aa19.91■□□□□ 0.78
PHGDH-229ENST00000641891 UVSSAQ2YD98 709 aa19.91■□□□□ 0.78
PHGDH-229ENST00000641891 OTUD7BQ6GQQ9 843 aa19.91■□□□□ 0.78
PHGDH-229ENST00000641891 EPB41L4AQ9HCS5 686 aaPredicted RBP19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms