RNA–Protein interactions for RNA: ENST00000641339.1

RGPD1-205, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

Gene RGPD1, Length 562 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-205ENST00000641339 SCARF1Q14162 830 aa20.54■□□□□ 0.88
RGPD1-205ENST00000641339 POLA2Q14181 598 aa20.54■□□□□ 0.88
RGPD1-205ENST00000641339 DLK2Q6UY11 383 aa20.54■□□□□ 0.88
RGPD1-205ENST00000641339 CDC37L1Q7L3B6 337 aa20.54■□□□□ 0.88
RGPD1-205ENST00000641339 KIAA0825Q8IV33 1275 aa20.54■□□□□ 0.88
RGPD1-205ENST00000641339 C1orf115Q9H7X2 142 aa20.54■□□□□ 0.88
RGPD1-205ENST00000641339 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.54■□□□□ 0.88
RGPD1-205ENST00000641339 IFIT1P09914 478 aaKnown RBP20.53■□□□□ 0.88
RGPD1-205ENST00000641339 MS4A1P11836 297 aa20.53■□□□□ 0.88
RGPD1-205ENST00000641339 MMP14P50281 582 aa20.53■□□□□ 0.88
RGPD1-205ENST00000641339 CAVIN4Q5BKX8 364 aa20.53■□□□□ 0.88
RGPD1-205ENST00000641339 USP48Q86UV5 1035 aa20.53■□□□□ 0.88
RGPD1-205ENST00000641339 OGFOD1Q8N543 542 aa20.53■□□□□ 0.88
RGPD1-205ENST00000641339 HSPA1AP0DMV8 641 aaKnown RBP20.52■□□□□ 0.88
RGPD1-205ENST00000641339 HSPA1BP0DMV9 641 aaKnown RBP20.52■□□□□ 0.88
RGPD1-205ENST00000641339 NBPF9Q3BBW0 867 aa20.52■□□□□ 0.88
RGPD1-205ENST00000641339 SSH3Q8TE77 659 aa20.52■□□□□ 0.88
RGPD1-205ENST00000641339 IQSEC3Q9UPP2 1182 aaPredicted RBP20.52■□□□□ 0.88
RGPD1-205ENST00000641339 WNT10BO00744 389 aa20.51■□□□□ 0.87
RGPD1-205ENST00000641339 SLC5A1P13866 664 aa20.51■□□□□ 0.87
RGPD1-205ENST00000641339 MVPQ14764 893 aaKnown RBP20.51■□□□□ 0.87
RGPD1-205ENST00000641339 ATP2B3Q16720 1220 aa20.51■□□□□ 0.87
RGPD1-205ENST00000641339 C20orf194Q5TEA3 1177 aa20.51■□□□□ 0.87
RGPD1-205ENST00000641339 VPS37DQ86XT2 251 aa20.51■□□□□ 0.87
RGPD1-205ENST00000641339 ZBED3Q96IU2 234 aaPredicted RBP20.51■□□□□ 0.87
RGPD1-205ENST00000641339 YTHDC1Q96MU7 727 aaKnown RBP20.51■□□□□ 0.87
RGPD1-205ENST00000641339 GGA3Q9NZ52 723 aa20.51■□□□□ 0.87
RGPD1-205ENST00000641339 COG6Q9Y2V7 657 aa20.51■□□□□ 0.87
RGPD1-205ENST00000641339 TFCP2Q12800 502 aa20.5■□□□□ 0.87
RGPD1-205ENST00000641339 ANGEL2Q5VTE6 544 aaKnown RBP20.5■□□□□ 0.87
RGPD1-205ENST00000641339 DCPSQ96C86 337 aaKnown RBP20.5■□□□□ 0.87
RGPD1-205ENST00000641339 TIMM10P62072 90 aa20.49■□□□□ 0.87
RGPD1-205ENST00000641339 MFSD14BQ5SR56 506 aa20.49■□□□□ 0.87
RGPD1-205ENST00000641339 KRT26Q7Z3Y9 468 aa20.49■□□□□ 0.87
RGPD1-205ENST00000641339 HDAC9Q9UKV0 1011 aa20.49■□□□□ 0.87
RGPD1-205ENST00000641339 ADM5C9JUS6 153 aa20.48■□□□□ 0.87
RGPD1-205ENST00000641339 F8W031 263 aaPredicted RBP20.48■□□□□ 0.87
RGPD1-205ENST00000641339 PDE3AQ14432 1141 aa20.48■□□□□ 0.87
RGPD1-205ENST00000641339 GRIK5Q16478 980 aa20.48■□□□□ 0.87
RGPD1-205ENST00000641339 CEP85Q6P2H3 762 aa20.48■□□□□ 0.87
RGPD1-205ENST00000641339 MTMR14Q8NCE2 650 aa20.48■□□□□ 0.87
RGPD1-205ENST00000641339 ZBTB40Q9NUA8 1239 aa20.48■□□□□ 0.87
RGPD1-205ENST00000641339 PCDHAC2Q9Y5I4 1007 aa20.48■□□□□ 0.87
RGPD1-205ENST00000641339 CELF2O95319 508 aaKnown RBP20.47■□□□□ 0.87
RGPD1-205ENST00000641339 ADORA1P30542 326 aa20.47■□□□□ 0.87
RGPD1-205ENST00000641339 SCAF8Q9UPN6 1271 aaKnown RBP20.47■□□□□ 0.87
RGPD1-205ENST00000641339 PITPNM2Q9BZ72 1349 aa20.47■□□□□ 0.87
RGPD1-205ENST00000641339 FRAT2O75474 233 aaPredicted RBP20.46■□□□□ 0.87
RGPD1-205ENST00000641339 PHKA1P46020 1223 aa20.46■□□□□ 0.87
RGPD1-205ENST00000641339 CHAF1AQ13111 956 aaPredicted RBP20.46■□□□□ 0.87
RGPD1-205ENST00000641339 G3BP1Q13283 466 aaKnown RBP eCLIP20.46■□□□□ 0.87
RGPD1-205ENST00000641339 DDX19BQ9UMR2 479 aa20.46■□□□□ 0.87
RGPD1-205ENST00000641339 NOP58Q9Y2X3 529 aaKnown RBP20.46■□□□□ 0.87
RGPD1-205ENST00000641339 CNTNAP1P78357 1384 aa20.46■□□□□ 0.87
RGPD1-205ENST00000641339 A0A1B0GUL7 405 aa20.45■□□□□ 0.86
RGPD1-205ENST00000641339 RASSF10A6NK89 507 aa20.45■□□□□ 0.86
RGPD1-205ENST00000641339 ZBTB22O15209 634 aa20.45■□□□□ 0.86
RGPD1-205ENST00000641339 CFAP100Q494V2 611 aa20.45■□□□□ 0.86
RGPD1-205ENST00000641339 SULF1Q8IWU6 871 aa20.45■□□□□ 0.86
RGPD1-205ENST00000641339 PRMT6Q96LA8 375 aaPredicted RBP20.45■□□□□ 0.86
RGPD1-205ENST00000641339 AKAP2Q9Y2D5 859 aa20.45■□□□□ 0.86
RGPD1-205ENST00000641339 DLGAP5Q15398 846 aa20.44■□□□□ 0.86
RGPD1-205ENST00000641339 CCDC102BQ68D86 513 aa20.44■□□□□ 0.86
RGPD1-205ENST00000641339 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.44■□□□□ 0.86
RGPD1-205ENST00000641339 TBC1D22AQ8WUA7 517 aa20.44■□□□□ 0.86
RGPD1-205ENST00000641339 XAGE2Q96GT9 111 aa20.44■□□□□ 0.86
RGPD1-205ENST00000641339 TTF2Q9UNY4 1162 aaKnown RBP20.44■□□□□ 0.86
RGPD1-205ENST00000641339 TLL2Q9Y6L7 1015 aa20.44■□□□□ 0.86
RGPD1-205ENST00000641339 AOX1Q06278 1338 aa20.44■□□□□ 0.86
RGPD1-205ENST00000641339 COL1A1P02452 1464 aaPredicted RBP20.43■□□□□ 0.86
RGPD1-205ENST00000641339 SPDYE2BA6NHP3 402 aa20.43■□□□□ 0.86
RGPD1-205ENST00000641339 SURF6O75683 361 aaKnown RBP20.43■□□□□ 0.86
RGPD1-205ENST00000641339 CAPN15O75808 1086 aa20.43■□□□□ 0.86
RGPD1-205ENST00000641339 SPDYE6P0CI01 402 aa20.43■□□□□ 0.86
RGPD1-205ENST00000641339 VEGFBP49765 207 aa20.43■□□□□ 0.86
RGPD1-205ENST00000641339 DEFB115Q30KQ5 88 aa20.43■□□□□ 0.86
RGPD1-205ENST00000641339 SAPCD2Q86UD0 394 aa20.43■□□□□ 0.86
RGPD1-205ENST00000641339 SIRT2Q8IXJ6 389 aa20.43■□□□□ 0.86
RGPD1-205ENST00000641339 ZNF408Q9H9D4 720 aa20.43■□□□□ 0.86
RGPD1-205ENST00000641339 ABT1Q9ULW3 272 aaKnown RBP20.43■□□□□ 0.86
RGPD1-205ENST00000641339 CDCA5Q96FF9 252 aa20.42■□□□□ 0.86
RGPD1-205ENST00000641339 SERPINA10Q9UK55 444 aa20.42■□□□□ 0.86
RGPD1-205ENST00000641339 PRAMEF18Q5VWM3 479 aa20.41■□□□□ 0.86
RGPD1-205ENST00000641339 TNS4Q8IZW8 715 aa20.41■□□□□ 0.86
RGPD1-205ENST00000641339 WDR66Q8TBY9 1149 aa20.41■□□□□ 0.86
RGPD1-205ENST00000641339 NEUROD6Q96NK8 337 aa20.41■□□□□ 0.86
RGPD1-205ENST00000641339 GNL3LQ9NVN8 582 aaKnown RBP20.41■□□□□ 0.86
RGPD1-205ENST00000641339 SUGT1Q9Y2Z0 365 aa20.41■□□□□ 0.86
RGPD1-205ENST00000641339 TRPM7Q96QT4 1865 aa20.41■□□□□ 0.86
RGPD1-205ENST00000641339 POLR2AP24928 1970 aaKnown RBP20.41■□□□□ 0.86
RGPD1-205ENST00000641339 SEMA3EO15041 775 aa20.4■□□□□ 0.86
RGPD1-205ENST00000641339 CRKP46108 304 aa20.4■□□□□ 0.86
RGPD1-205ENST00000641339 RPAP2Q8IXW5 612 aaPredicted RBP20.4■□□□□ 0.86
RGPD1-205ENST00000641339 MRIQ9BWK5 157 aa20.4■□□□□ 0.86
RGPD1-205ENST00000641339 GPR108Q9NPR9 543 aa20.4■□□□□ 0.86
RGPD1-205ENST00000641339 RBM5P52756 815 aaKnown RBP eCLIP20.39■□□□□ 0.85
RGPD1-205ENST00000641339 HDLBPQ00341 1268 aaKnown RBP20.39■□□□□ 0.85
RGPD1-205ENST00000641339 RASGRF1Q13972 1273 aa20.39■□□□□ 0.85
RGPD1-205ENST00000641339 DENND2AQ9ULE3 1009 aa20.39■□□□□ 0.85
RGPD1-205ENST00000641339 FOXN1O15353 648 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms