RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 FANCLQ9NW38 375 aa15.89■□□□□ 0.13
SCARB2-227ENST00000640957 KIF2AO00139 706 aaPredicted RBP15.88■□□□□ 0.13
SCARB2-227ENST00000640957 TOP1P11387 765 aaKnown RBP15.88■□□□□ 0.13
SCARB2-227ENST00000640957 TTC41PQ6P2S7 1318 aa15.88■□□□□ 0.13
SCARB2-227ENST00000640957 EP400NLQ6ZTU2 488 aa15.88■□□□□ 0.13
SCARB2-227ENST00000640957 AIFM3Q96NN9 605 aa15.88■□□□□ 0.13
SCARB2-227ENST00000640957 OSBPL5Q9H0X9 879 aaPredicted RBP15.88■□□□□ 0.13
SCARB2-227ENST00000640957 COL15A1P39059 1388 aa15.88■□□□□ 0.13
SCARB2-227ENST00000640957 VWA3AA6NCI4 1184 aa15.88■□□□□ 0.13
SCARB2-227ENST00000640957 SRLQ86TD4 932 aa15.88■□□□□ 0.13
SCARB2-227ENST00000640957 PACS2Q86VP3 889 aa15.88■□□□□ 0.13
SCARB2-227ENST00000640957 FMR1NBQ8N0W7 255 aaPredicted RBP15.88■□□□□ 0.13
SCARB2-227ENST00000640957 ZNF202O95125 648 aa15.88■□□□□ 0.13
SCARB2-227ENST00000640957 LRRFIP1Q32MZ4 808 aaKnown RBP15.88■□□□□ 0.13
SCARB2-227ENST00000640957 PLEKHO1Q53GL0 409 aaPredicted RBP15.88■□□□□ 0.13
SCARB2-227ENST00000640957 CCDC150Q8NCX0 1101 aa15.88■□□□□ 0.13
SCARB2-227ENST00000640957 PPP2R2CQ9Y2T4 447 aa15.88■□□□□ 0.13
SCARB2-227ENST00000640957 MAP3K5Q99683 1374 aa15.87■□□□□ 0.13
SCARB2-227ENST00000640957 FOXN1O15353 648 aa15.87■□□□□ 0.13
SCARB2-227ENST00000640957 ATP2B1P20020 1258 aa15.87■□□□□ 0.13
SCARB2-227ENST00000640957 LEKR1Q6ZMV7 388 aa15.87■□□□□ 0.13
SCARB2-227ENST00000640957 AK7Q96M32 723 aa15.87■□□□□ 0.13
SCARB2-227ENST00000640957 CLIC6Q96NY7 704 aa15.87■□□□□ 0.13
SCARB2-227ENST00000640957 FUT8Q9BYC5 575 aa15.87■□□□□ 0.13
SCARB2-227ENST00000640957 CTAGE5O15320 804 aa15.87■□□□□ 0.13
SCARB2-227ENST00000640957 PRR29P0C7W0 189 aa15.87■□□□□ 0.13
SCARB2-227ENST00000640957 FAM193AP78312 1265 aa15.87■□□□□ 0.13
SCARB2-227ENST00000640957 HSP90AB4PQ58FF6 505 aa15.87■□□□□ 0.13
SCARB2-227ENST00000640957 FKBP15Q5T1M5 1219 aa15.87■□□□□ 0.13
SCARB2-227ENST00000640957 ERC1Q8IUD2 1116 aa15.87■□□□□ 0.13
SCARB2-227ENST00000640957 ZSCAN16Q9H4T2 348 aaPredicted RBP15.87■□□□□ 0.13
SCARB2-227ENST00000640957 TBX22Q9Y458 520 aa15.87■□□□□ 0.13
SCARB2-227ENST00000640957 PTPRUQ92729 1446 aa15.87■□□□□ 0.13
SCARB2-227ENST00000640957 IGSF1Q8N6C5 1336 aa15.87■□□□□ 0.13
SCARB2-227ENST00000640957 NOP2P46087 812 aaKnown RBP15.86■□□□□ 0.13
SCARB2-227ENST00000640957 NEUROD6Q96NK8 337 aa15.86■□□□□ 0.13
SCARB2-227ENST00000640957 NCAPHQ15003 741 aa15.86■□□□□ 0.13
SCARB2-227ENST00000640957 CCDC85AQ96PX6 553 aaPredicted RBP15.86■□□□□ 0.13
SCARB2-227ENST00000640957 ADAMTS13Q76LX8 1427 aa15.86■□□□□ 0.13
SCARB2-227ENST00000640957 PSDA5PKW4 1024 aaPredicted RBP15.85■□□□□ 0.13
SCARB2-227ENST00000640957 EFCAB8A8MWE9 144 aa15.85■□□□□ 0.13
SCARB2-227ENST00000640957 ATP5J2-PTCD1G3V325 749 aa15.85■□□□□ 0.13
SCARB2-227ENST00000640957 PTCD1O75127 700 aaKnown RBP15.85■□□□□ 0.13
SCARB2-227ENST00000640957 SLC20A2Q08357 652 aa15.85■□□□□ 0.13
SCARB2-227ENST00000640957 RGS22Q8NE09 1264 aa15.85■□□□□ 0.13
SCARB2-227ENST00000640957 RIMBP3CA6NJZ7 1639 aa15.85■□□□□ 0.13
SCARB2-227ENST00000640957 RIMBP3BA6NNM3 1639 aa15.85■□□□□ 0.13
SCARB2-227ENST00000640957 RIMBP3Q9UFD9 1639 aa15.85■□□□□ 0.13
SCARB2-227ENST00000640957 NPHP4O75161 1426 aaPredicted RBP15.85■□□□□ 0.13
SCARB2-227ENST00000640957 RIN2Q8WYP3 895 aaPredicted RBP15.85■□□□□ 0.13
SCARB2-227ENST00000640957 ZNF396Q96N95 335 aaPredicted RBP15.85■□□□□ 0.13
SCARB2-227ENST00000640957 POLD4Q9HCU8 107 aa15.85■□□□□ 0.13
SCARB2-227ENST00000640957 CDC42BPGQ6DT37 1551 aa15.85■□□□□ 0.13
SCARB2-227ENST00000640957 ZMYND10O75800 440 aa15.85■□□□□ 0.13
SCARB2-227ENST00000640957 ABL1P00519 1130 aa15.85■□□□□ 0.13
SCARB2-227ENST00000640957 FBXO18Q8NFZ0 1043 aa15.85■□□□□ 0.13
SCARB2-227ENST00000640957 CAVIN2O95810 425 aa15.84■□□□□ 0.13
SCARB2-227ENST00000640957 GCP02774 474 aa15.84■□□□□ 0.13
SCARB2-227ENST00000640957 EIF4A1P60842 406 aaKnown RBP15.84■□□□□ 0.13
SCARB2-227ENST00000640957 ANKRD24Q8TF21 1146 aa15.84■□□□□ 0.13
SCARB2-227ENST00000640957 PNKPQ96T60 521 aa15.84■□□□□ 0.13
SCARB2-227ENST00000640957 ACTN2P35609 894 aa15.84■□□□□ 0.13
SCARB2-227ENST00000640957 EPHA10Q5JZY3 1008 aa15.84■□□□□ 0.13
SCARB2-227ENST00000640957 CCDC158Q5M9N0 1113 aa15.84■□□□□ 0.13
SCARB2-227ENST00000640957 DHX37Q8IY37 1157 aaKnown RBP15.84■□□□□ 0.13
SCARB2-227ENST00000640957 CWC15Q9P013 229 aaKnown RBP15.84■□□□□ 0.13
SCARB2-227ENST00000640957 KIF20BQ96Q89 1820 aa15.84■□□□□ 0.13
SCARB2-227ENST00000640957 PFKFB1P16118 471 aa15.83■□□□□ 0.13
SCARB2-227ENST00000640957 DHX8Q14562 1220 aaKnown RBP15.83■□□□□ 0.13
SCARB2-227ENST00000640957 TTC19Q6DKK2 380 aaPredicted RBP15.83■□□□□ 0.13
SCARB2-227ENST00000640957 GRAMD1CQ8IYS0 662 aa15.83■□□□□ 0.13
SCARB2-227ENST00000640957 RAPGEF4Q8WZA2 1011 aa15.83■□□□□ 0.13
SCARB2-227ENST00000640957 DBNDD2Q9BQY9 259 aa15.83■□□□□ 0.13
SCARB2-227ENST00000640957 TSPYL1Q9H0U9 437 aa15.83■□□□□ 0.13
SCARB2-227ENST00000640957 MRPL44Q9H9J2 332 aaKnown RBP15.83■□□□□ 0.13
SCARB2-227ENST00000640957 SOWAHDA6NJG2 315 aa15.83■□□□□ 0.12
SCARB2-227ENST00000640957 UBE2Q2LH0YL09 131 aa15.83■□□□□ 0.12
SCARB2-227ENST00000640957 SPTLC2O15270 562 aa15.83■□□□□ 0.12
SCARB2-227ENST00000640957 EPB41L2O43491 1005 aaKnown RBP15.83■□□□□ 0.12
SCARB2-227ENST00000640957 CDC27P30260 824 aa15.83■□□□□ 0.12
SCARB2-227ENST00000640957 SIRT1Q96EB6 747 aa15.83■□□□□ 0.12
SCARB2-227ENST00000640957 ABCB6Q9NP58 842 aa15.83■□□□□ 0.12
SCARB2-227ENST00000640957 DBF4Q9UBU7 674 aaPredicted RBP15.83■□□□□ 0.12
SCARB2-227ENST00000640957 GOLIM4O00461 696 aa15.83■□□□□ 0.12
SCARB2-227ENST00000640957 WDHD1O75717 1129 aaPredicted RBP15.83■□□□□ 0.12
SCARB2-227ENST00000640957 NEXNQ0ZGT2 675 aa15.83■□□□□ 0.12
SCARB2-227ENST00000640957 SYNE3Q6ZMZ3 975 aa15.83■□□□□ 0.12
SCARB2-227ENST00000640957 KCNB2Q92953 911 aa15.83■□□□□ 0.12
SCARB2-227ENST00000640957 KAZALD1Q96I82 304 aa15.83■□□□□ 0.12
SCARB2-227ENST00000640957 MYD88Q99836 296 aa15.83■□□□□ 0.12
SCARB2-227ENST00000640957 BAG1Q99933 345 aaPredicted RBP15.83■□□□□ 0.12
SCARB2-227ENST00000640957 IMPACTQ9P2X3 320 aa15.83■□□□□ 0.12
SCARB2-227ENST00000640957 ARHGEF10O15013 1369 aa15.82■□□□□ 0.12
SCARB2-227ENST00000640957 KIF28PB7ZC32 967 aa15.82■□□□□ 0.12
SCARB2-227ENST00000640957 PDE4BQ07343 736 aa15.82■□□□□ 0.12
SCARB2-227ENST00000640957 TFCP2Q12800 502 aa15.82■□□□□ 0.12
SCARB2-227ENST00000640957 KLHL10Q6JEL2 608 aa15.82■□□□□ 0.12
SCARB2-227ENST00000640957 SECISBP2LQ93073 1101 aaKnown RBP15.82■□□□□ 0.12
SCARB2-227ENST00000640957 HSD3B7Q9H2F3 369 aa15.82■□□□□ 0.12
SCARB2-227ENST00000640957 JRKLQ9Y4A0 524 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms