RNA–Protein interactions for RNA: ENST00000640552.1

GFAP-237, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 3,573 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-237ENST00000640552 NCOA7Q8NI08 942 aa16.44■□□□□ 0.22
GFAP-237ENST00000640552 DSCC1Q9BVC3 393 aa16.44■□□□□ 0.22
GFAP-237ENST00000640552 KIF1AQ12756 1690 aa16.44■□□□□ 0.22
GFAP-237ENST00000640552 SYNE3Q6ZMZ3 975 aa16.43■□□□□ 0.22
GFAP-237ENST00000640552 NSUN7Q8NE18 718 aaKnown RBP16.43■□□□□ 0.22
GFAP-237ENST00000640552 AIFM3Q96NN9 605 aa16.43■□□□□ 0.22
GFAP-237ENST00000640552 BIN1O00499 593 aa16.43■□□□□ 0.22
GFAP-237ENST00000640552 MBD4O95243 580 aa16.43■□□□□ 0.22
GFAP-237ENST00000640552 PDE8BO95263 885 aa16.43■□□□□ 0.22
GFAP-237ENST00000640552 ADD1P35611 737 aaKnown RBP16.43■□□□□ 0.22
GFAP-237ENST00000640552 DCCP43146 1447 aa16.43■□□□□ 0.22
GFAP-237ENST00000640552 CCAR1Q8IX12 1150 aaKnown RBP16.43■□□□□ 0.22
GFAP-237ENST00000640552 CMTR1Q8N1G2 835 aaKnown RBP16.43■□□□□ 0.22
GFAP-237ENST00000640552 CFAP45Q9UL16 551 aa16.43■□□□□ 0.22
GFAP-237ENST00000640552 SH3TC1Q8TE82 1336 aa16.43■□□□□ 0.22
GFAP-237ENST00000640552 WTIPA6NIX2 430 aaPredicted RBP16.43■□□□□ 0.22
GFAP-237ENST00000640552 BECN2A8MW95 431 aa16.43■□□□□ 0.22
GFAP-237ENST00000640552 LETM1O95202 739 aaPredicted RBP16.43■□□□□ 0.22
GFAP-237ENST00000640552 USP28Q96RU2 1077 aa16.43■□□□□ 0.22
GFAP-237ENST00000640552 LOC102724428A0A0B4J2F2 783 aa16.42■□□□□ 0.22
GFAP-237ENST00000640552 CIAO1O76071 339 aa16.42■□□□□ 0.22
GFAP-237ENST00000640552 SIK1P57059 783 aa16.42■□□□□ 0.22
GFAP-237ENST00000640552 TYRO3Q06418 890 aa16.42■□□□□ 0.22
GFAP-237ENST00000640552 USPL1Q5W0Q7 1092 aa16.42■□□□□ 0.22
GFAP-237ENST00000640552 KCNB2Q92953 911 aa16.42■□□□□ 0.22
GFAP-237ENST00000640552 UTP14AQ9BVJ6 771 aaKnown RBP16.42■□□□□ 0.22
GFAP-237ENST00000640552 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.42■□□□□ 0.22
GFAP-237ENST00000640552 KINO60870 393 aaKnown RBP16.42■□□□□ 0.22
GFAP-237ENST00000640552 MARCKSP29966 332 aaPredicted RBP16.42■□□□□ 0.22
GFAP-237ENST00000640552 CHAF1AQ13111 956 aaPredicted RBP16.42■□□□□ 0.22
GFAP-237ENST00000640552 PRKAB2O43741 272 aa16.42■□□□□ 0.22
GFAP-237ENST00000640552 SLC5A1P13866 664 aa16.42■□□□□ 0.22
GFAP-237ENST00000640552 FSIP1Q8NA03 581 aa16.42■□□□□ 0.22
GFAP-237ENST00000640552 GOLGA6L19H0YKK7 550 aa16.41■□□□□ 0.22
GFAP-237ENST00000640552 CCDC87Q9NVE4 849 aa16.41■□□□□ 0.22
GFAP-237ENST00000640552 RIPOR2Q9Y4F9 1068 aa16.41■□□□□ 0.22
GFAP-237ENST00000640552 UBN2Q6ZU65 1347 aa16.41■□□□□ 0.22
GFAP-237ENST00000640552 A0A1B0GVL5 298 aa16.41■□□□□ 0.22
GFAP-237ENST00000640552 GPR108Q9NPR9 543 aa16.41■□□□□ 0.22
GFAP-237ENST00000640552 FAM13BQ9NYF5 915 aa16.41■□□□□ 0.22
GFAP-237ENST00000640552 ZFYP08048 801 aaPredicted RBP16.41■□□□□ 0.22
GFAP-237ENST00000640552 PGBD1Q96JS3 809 aa16.41■□□□□ 0.22
GFAP-237ENST00000640552 ZKSCAN5Q9Y2L8 839 aa16.41■□□□□ 0.22
GFAP-237ENST00000640552 IFIT3O14879 490 aaKnown RBP16.4■□□□□ 0.22
GFAP-237ENST00000640552 PFKFB2O60825 505 aa16.4■□□□□ 0.22
GFAP-237ENST00000640552 PDE6AP16499 860 aa16.4■□□□□ 0.22
GFAP-237ENST00000640552 HMGN5P82970 282 aaKnown RBP16.4■□□□□ 0.22
GFAP-237ENST00000640552 MAP3K12Q12852 859 aa16.4■□□□□ 0.22
GFAP-237ENST00000640552 STRCP1A6NGW2 1772 aa16.4■□□□□ 0.22
GFAP-237ENST00000640552 GYG1P46976 350 aa16.4■□□□□ 0.22
GFAP-237ENST00000640552 ZSCAN25Q6NSZ9 544 aa16.4■□□□□ 0.22
GFAP-237ENST00000640552 CTDNEP1O95476 244 aa16.39■□□□□ 0.22
GFAP-237ENST00000640552 ZNF165P49910 485 aa16.39■□□□□ 0.22
GFAP-237ENST00000640552 TMEM67Q5HYA8 995 aa16.39■□□□□ 0.22
GFAP-237ENST00000640552 SENP2Q9HC62 589 aa16.39■□□□□ 0.21
GFAP-237ENST00000640552 SCN11AQ9UI33 1791 aa16.39■□□□□ 0.21
GFAP-237ENST00000640552 AFDNP55196 1824 aaKnown RBP16.39■□□□□ 0.21
GFAP-237ENST00000640552 PRDM1O75626 825 aa16.39■□□□□ 0.21
GFAP-237ENST00000640552 METAP2P50579 478 aaKnown RBP eCLIP16.39■□□□□ 0.21
GFAP-237ENST00000640552 PUM3Q15397 648 aaKnown RBP16.39■□□□□ 0.21
GFAP-237ENST00000640552 SPATA5Q8NB90 893 aa16.39■□□□□ 0.21
GFAP-237ENST00000640552 SLC4A4Q9Y6R1 1079 aa16.39■□□□□ 0.21
GFAP-237ENST00000640552 ALS2Q96Q42 1657 aa16.39■□□□□ 0.21
GFAP-237ENST00000640552 ZNF396Q96N95 335 aaPredicted RBP16.38■□□□□ 0.21
GFAP-237ENST00000640552 hCG_1642624A0A1W2PR95 340 aa16.38■□□□□ 0.21
GFAP-237ENST00000640552 DHX16O60231 1041 aaKnown RBP16.38■□□□□ 0.21
GFAP-237ENST00000640552 RASGRF1Q13972 1273 aa16.38■□□□□ 0.21
GFAP-237ENST00000640552 CPLX2Q6PUV4 134 aaKnown RBP16.38■□□□□ 0.21
GFAP-237ENST00000640552 NOL7Q9UMY1 257 aaKnown RBP16.38■□□□□ 0.21
GFAP-237ENST00000640552 RESTQ13127 1097 aa16.38■□□□□ 0.21
GFAP-237ENST00000640552 SDR42E1Q8WUS8 393 aa16.38■□□□□ 0.21
GFAP-237ENST00000640552 UBE2Q2LH0YL09 131 aa16.37■□□□□ 0.21
GFAP-237ENST00000640552 ITPK1Q13572 414 aa16.37■□□□□ 0.21
GFAP-237ENST00000640552 TRIM29Q14134 588 aa16.37■□□□□ 0.21
GFAP-237ENST00000640552 CCDC152Q4G0S7 254 aa16.37■□□□□ 0.21
GFAP-237ENST00000640552 VSIG10Q8N0Z9 540 aa16.37■□□□□ 0.21
GFAP-237ENST00000640552 MARCH10Q8NA82 808 aaPredicted RBP16.37■□□□□ 0.21
GFAP-237ENST00000640552 TMEM87AQ8NBN3 555 aa16.37■□□□□ 0.21
GFAP-237ENST00000640552 IL17RAQ96F46 866 aa16.37■□□□□ 0.21
GFAP-237ENST00000640552 SLC26A6Q9BXS9 759 aa16.37■□□□□ 0.21
GFAP-237ENST00000640552 CCDC69A6NI79 296 aa16.37■□□□□ 0.21
GFAP-237ENST00000640552 CSF1RP07333 972 aa16.37■□□□□ 0.21
GFAP-237ENST00000640552 CYP7A1P22680 504 aa16.37■□□□□ 0.21
GFAP-237ENST00000640552 IL6STP40189 918 aaPredicted RBP16.37■□□□□ 0.21
GFAP-237ENST00000640552 TSGA10IPQ3SY00 556 aa16.37■□□□□ 0.21
GFAP-237ENST00000640552 TBC1D10CQ8IV04 446 aa16.37■□□□□ 0.21
GFAP-237ENST00000640552 LPIN2Q92539 896 aa16.37■□□□□ 0.21
GFAP-237ENST00000640552 ZSCAN16Q9H4T2 348 aaPredicted RBP16.37■□□□□ 0.21
GFAP-237ENST00000640552 FILIP1Q7Z7B0 1213 aa16.37■□□□□ 0.21
GFAP-237ENST00000640552 GOLGA8AA7E2F4 631 aa16.36■□□□□ 0.21
GFAP-237ENST00000640552 TTF1Q15361 905 aaPredicted RBP16.36■□□□□ 0.21
GFAP-237ENST00000640552 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.36■□□□□ 0.21
GFAP-237ENST00000640552 ALG1Q9BT22 464 aa16.36■□□□□ 0.21
GFAP-237ENST00000640552 ADD2P35612 726 aa16.36■□□□□ 0.21
GFAP-237ENST00000640552 TRIM28Q13263 835 aaKnown RBP16.36■□□□□ 0.21
GFAP-237ENST00000640552 PTF1AQ7RTS3 328 aa16.36■□□□□ 0.21
GFAP-237ENST00000640552 TFCP2L1Q9NZI6 479 aa16.36■□□□□ 0.21
GFAP-237ENST00000640552 EXOSC10Q01780 885 aaKnown RBP16.36■□□□□ 0.21
GFAP-237ENST00000640552 CBX8Q9HC52 389 aa16.36■□□□□ 0.21
GFAP-237ENST00000640552 SPECC1Q5M775 1068 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms