RNA–Protein interactions for RNA: ENST00000640056.1

HNRNPU-224, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-224ENST00000640056 LRMPQ12912 555 aa11.79□□□□□ -0.52
HNRNPU-224ENST00000640056 RNF20Q5VTR2 975 aa11.79□□□□□ -0.52
HNRNPU-224ENST00000640056 LEO1Q8WVC0 666 aaPredicted RBP11.79□□□□□ -0.52
HNRNPU-224ENST00000640056 CHPF2Q9P2E5 772 aa11.79□□□□□ -0.52
HNRNPU-224ENST00000640056 CDC25BP30305 580 aa11.78□□□□□ -0.52
HNRNPU-224ENST00000640056 ZNF165P49910 485 aa11.78□□□□□ -0.52
HNRNPU-224ENST00000640056 BLOC1S2Q6QNY1 142 aa11.78□□□□□ -0.52
HNRNPU-224ENST00000640056 C16orf45Q96MC5 204 aaPredicted RBP11.78□□□□□ -0.52
HNRNPU-224ENST00000640056 FMNL2Q96PY5 1086 aa11.78□□□□□ -0.52
HNRNPU-224ENST00000640056 TFIP11Q9UBB9 837 aaKnown RBP11.78□□□□□ -0.52
HNRNPU-224ENST00000640056 NARFQ9UHQ1 456 aa11.78□□□□□ -0.52
HNRNPU-224ENST00000640056 TJP1Q07157 1748 aa11.78□□□□□ -0.52
HNRNPU-224ENST00000640056 HEG1Q9ULI3 1381 aa11.78□□□□□ -0.52
HNRNPU-224ENST00000640056 RPS6KB1P23443 525 aa11.77□□□□□ -0.52
HNRNPU-224ENST00000640056 NMIQ13287 307 aaPredicted RBP11.77□□□□□ -0.52
HNRNPU-224ENST00000640056 FAM227BQ96M60 508 aa11.77□□□□□ -0.52
HNRNPU-224ENST00000640056 COL15A1P39059 1388 aa11.77□□□□□ -0.53
HNRNPU-224ENST00000640056 NR1I2O75469 434 aa11.77□□□□□ -0.53
HNRNPU-224ENST00000640056 ALDH1L1O75891 902 aa11.77□□□□□ -0.53
HNRNPU-224ENST00000640056 TSGA10IPQ3SY00 556 aa11.77□□□□□ -0.53
HNRNPU-224ENST00000640056 AACSQ86V21 672 aa11.77□□□□□ -0.53
HNRNPU-224ENST00000640056 CCDC112Q8NEF3 446 aa11.77□□□□□ -0.53
HNRNPU-224ENST00000640056 CGNQ9P2M7 1197 aaKnown RBP11.77□□□□□ -0.53
HNRNPU-224ENST00000640056 CLIP2Q9UDT6 1046 aa11.77□□□□□ -0.53
HNRNPU-224ENST00000640056 CTNNA3Q9UI47 895 aa11.77□□□□□ -0.53
HNRNPU-224ENST00000640056 BTBD11A6QL63 1104 aa11.76□□□□□ -0.53
HNRNPU-224ENST00000640056 TM4SF1P30408 202 aa11.76□□□□□ -0.53
HNRNPU-224ENST00000640056 TOB2Q14106 344 aaPredicted RBP11.76□□□□□ -0.53
HNRNPU-224ENST00000640056 TPD52L1Q16890 204 aaPredicted RBP11.76□□□□□ -0.53
HNRNPU-224ENST00000640056 CACTINQ8WUQ7 758 aaKnown RBP11.76□□□□□ -0.53
HNRNPU-224ENST00000640056 ZNF496Q96IT1 587 aaPredicted RBP11.76□□□□□ -0.53
HNRNPU-224ENST00000640056 PGBD1Q96JS3 809 aa11.76□□□□□ -0.53
HNRNPU-224ENST00000640056 C9orf78Q9NZ63 289 aaPredicted RBP11.76□□□□□ -0.53
HNRNPU-224ENST00000640056 ZBTB1Q9Y2K1 713 aa11.76□□□□□ -0.53
HNRNPU-224ENST00000640056 C4AP0C0L4 1744 aa11.76□□□□□ -0.53
HNRNPU-224ENST00000640056 NEMFO60524 1076 aa11.76□□□□□ -0.53
HNRNPU-224ENST00000640056 HTRA3P83110 453 aa11.76□□□□□ -0.53
HNRNPU-224ENST00000640056 SARM1Q6SZW1 724 aa11.76□□□□□ -0.53
HNRNPU-224ENST00000640056 DNAJC25Q9H1X3 360 aa11.76□□□□□ -0.53
HNRNPU-224ENST00000640056 HMG20BQ9P0W2 317 aa11.76□□□□□ -0.53
HNRNPU-224ENST00000640056 PA2G4Q9UQ80 394 aaKnown RBP11.76□□□□□ -0.53
HNRNPU-224ENST00000640056 IL6STP40189 918 aaPredicted RBP11.75□□□□□ -0.53
HNRNPU-224ENST00000640056 EIF5P55010 431 aaKnown RBP11.75□□□□□ -0.53
HNRNPU-224ENST00000640056 COL9A3Q14050 684 aaPredicted RBP11.75□□□□□ -0.53
HNRNPU-224ENST00000640056 BICD2Q8TD16 824 aa11.75□□□□□ -0.53
HNRNPU-224ENST00000640056 DBF4Q9UBU7 674 aaPredicted RBP11.75□□□□□ -0.53
HNRNPU-224ENST00000640056 SRP68Q9UHB9 627 aaKnown RBP11.75□□□□□ -0.53
HNRNPU-224ENST00000640056 DDX41Q9UJV9 622 aaKnown RBP11.75□□□□□ -0.53
HNRNPU-224ENST00000640056 CCDC144BQ3MJ40 725 aa11.74□□□□□ -0.53
HNRNPU-224ENST00000640056 USPL1Q5W0Q7 1092 aa11.74□□□□□ -0.53
HNRNPU-224ENST00000640056 CEP135Q66GS9 1140 aa11.74□□□□□ -0.53
HNRNPU-224ENST00000640056 LRRC8AQ8IWT6 810 aa11.74□□□□□ -0.53
HNRNPU-224ENST00000640056 CCDC144CPQ8IYA2 1237 aa11.74□□□□□ -0.53
HNRNPU-224ENST00000640056 EAF2Q96CJ1 260 aaPredicted RBP11.74□□□□□ -0.53
HNRNPU-224ENST00000640056 MRFAP1L1Q96HT8 127 aa11.74□□□□□ -0.53
HNRNPU-224ENST00000640056 ZSCAN16Q9H4T2 348 aaPredicted RBP11.74□□□□□ -0.53
HNRNPU-224ENST00000640056 CFAP45Q9UL16 551 aa11.74□□□□□ -0.53
HNRNPU-224ENST00000640056 UBR2Q8IWV8 1755 aa11.74□□□□□ -0.53
HNRNPU-224ENST00000640056 A0A0D9SFI3 127 aa11.74□□□□□ -0.53
HNRNPU-224ENST00000640056 GOLGA6L19H0YKK7 550 aa11.74□□□□□ -0.53
HNRNPU-224ENST00000640056 POLRMTO00411 1230 aaKnown RBP11.74□□□□□ -0.53
HNRNPU-224ENST00000640056 RGL2O15211 777 aa11.74□□□□□ -0.53
HNRNPU-224ENST00000640056 SASH1O94885 1247 aa11.74□□□□□ -0.53
HNRNPU-224ENST00000640056 GABPB1Q06547 395 aaPredicted RBP11.74□□□□□ -0.53
HNRNPU-224ENST00000640056 G3BP1Q13283 466 aaKnown RBP eCLIP11.74□□□□□ -0.532e-8■■■□□ 17
HNRNPU-224ENST00000640056 KRT32Q14532 448 aa11.74□□□□□ -0.53
HNRNPU-224ENST00000640056 IQCB1Q15051 598 aa11.74□□□□□ -0.53
HNRNPU-224ENST00000640056 KSR2Q6VAB6 950 aa11.74□□□□□ -0.53
HNRNPU-224ENST00000640056 TCEANC2Q96MN5 208 aa11.74□□□□□ -0.53
HNRNPU-224ENST00000640056 MAP3K2Q9Y2U5 619 aa11.74□□□□□ -0.53
HNRNPU-224ENST00000640056 MORC2Q9Y6X9 1032 aaPredicted RBP11.74□□□□□ -0.53
HNRNPU-224ENST00000640056 CTAGE5O15320 804 aa11.73□□□□□ -0.53
HNRNPU-224ENST00000640056 ANXA1P04083 346 aa11.73□□□□□ -0.53
HNRNPU-224ENST00000640056 DDR1Q08345 913 aa11.73□□□□□ -0.53
HNRNPU-224ENST00000640056 RESTQ13127 1097 aa11.73□□□□□ -0.53
HNRNPU-224ENST00000640056 ABHD8Q96I13 439 aa11.73□□□□□ -0.53
HNRNPU-224ENST00000640056 FSD1Q9BTV5 496 aa11.73□□□□□ -0.53
HNRNPU-224ENST00000640056 MED23Q9ULK4 1368 aa11.73□□□□□ -0.53
HNRNPU-224ENST00000640056 KCNQ3O43525 872 aa11.72□□□□□ -0.53
HNRNPU-224ENST00000640056 SNRPA1P09661 255 aaKnown RBP11.72□□□□□ -0.53
HNRNPU-224ENST00000640056 STK3Q13188 491 aa11.72□□□□□ -0.53
HNRNPU-224ENST00000640056 GTF3C6Q969F1 213 aa11.72□□□□□ -0.53
HNRNPU-224ENST00000640056 CCDC8Q9H0W5 538 aaPredicted RBP11.72□□□□□ -0.53
HNRNPU-224ENST00000640056 BOLA2Q9H3K6 86 aa11.72□□□□□ -0.53
HNRNPU-224ENST00000640056 PIM2Q9P1W9 311 aa11.72□□□□□ -0.53
HNRNPU-224ENST00000640056 KIF13BQ9NQT8 1826 aa11.72□□□□□ -0.53
HNRNPU-224ENST00000640056 DPEP1P16444 411 aa11.72□□□□□ -0.53
HNRNPU-224ENST00000640056 TAF3Q5VWG9 929 aa11.72□□□□□ -0.53
HNRNPU-224ENST00000640056 RBM46Q8TBY0 533 aaKnown RBP11.72□□□□□ -0.53
HNRNPU-224ENST00000640056 TAF6LQ9Y6J9 622 aa11.72□□□□□ -0.53
HNRNPU-224ENST00000640056 MYH14Q7Z406 1995 aaKnown RBP11.71□□□□□ -0.53
HNRNPU-224ENST00000640056 UTYO14607 1347 aa11.71□□□□□ -0.53
HNRNPU-224ENST00000640056 A0A0G2JLW4 131 aa11.71□□□□□ -0.53
HNRNPU-224ENST00000640056 H3BQV1 296 aa11.71□□□□□ -0.53
HNRNPU-224ENST00000640056 TAF5LO75529 589 aa11.71□□□□□ -0.53
HNRNPU-224ENST00000640056 NAA30Q147X3 362 aaPredicted RBP11.71□□□□□ -0.53
HNRNPU-224ENST00000640056 NFIXQ14938 502 aa11.71□□□□□ -0.53
HNRNPU-224ENST00000640056 PTPN14Q15678 1187 aa11.71□□□□□ -0.53
HNRNPU-224ENST00000640056 STX1AQ16623 288 aa11.71□□□□□ -0.53
HNRNPU-224ENST00000640056 NYAP1Q6ZVC0 841 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms