RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 TEX19Q8NA77 164 aa4.9□□□□□ -1.62
SCN3A-209ENST00000639244 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.9□□□□□ -1.62
SCN3A-209ENST00000639244 BCL2L12Q9HB09 334 aa4.9□□□□□ -1.62
SCN3A-209ENST00000639244 SPECC1Q5M775 1068 aa4.9□□□□□ -1.62
SCN3A-209ENST00000639244 HOOK3Q86VS8 718 aa4.9□□□□□ -1.62
SCN3A-209ENST00000639244 NT5DC4Q86YG4 428 aa4.9□□□□□ -1.62
SCN3A-209ENST00000639244 GIMAP1Q8WWP7 306 aa4.9□□□□□ -1.62
SCN3A-209ENST00000639244 JDP2Q8WYK2 163 aa4.9□□□□□ -1.62
SCN3A-209ENST00000639244 LNPKQ9C0E8 428 aa4.9□□□□□ -1.62
SCN3A-209ENST00000639244 ASAP1Q9ULH1 1129 aa4.9□□□□□ -1.62
SCN3A-209ENST00000639244 TMEM98Q9Y2Y6 226 aa4.9□□□□□ -1.62
SCN3A-209ENST00000639244 TTC39BQ5VTQ0 682 aaPredicted RBP4.9□□□□□ -1.63
SCN3A-209ENST00000639244 DCLK2Q8N568 766 aa4.9□□□□□ -1.63
SCN3A-209ENST00000639244 DUSP9Q99956 384 aaKnown RBP4.9□□□□□ -1.63
SCN3A-209ENST00000639244 MUC3BQ9H195 1237 aa4.9□□□□□ -1.63
SCN3A-209ENST00000639244 PLEKHG2Q9H7P9 1386 aa4.9□□□□□ -1.63
SCN3A-209ENST00000639244 HSPA1AP0DMV8 641 aaKnown RBP4.9□□□□□ -1.63
SCN3A-209ENST00000639244 HSPA1BP0DMV9 641 aaKnown RBP4.9□□□□□ -1.63
SCN3A-209ENST00000639244 SMARCA1P28370 1054 aa4.9□□□□□ -1.63
SCN3A-209ENST00000639244 TNNI2P48788 182 aa4.9□□□□□ -1.63
SCN3A-209ENST00000639244 KAZNQ674X7 775 aa4.9□□□□□ -1.63
SCN3A-209ENST00000639244 EZH1Q92800 747 aaPredicted RBP4.9□□□□□ -1.63
SCN3A-209ENST00000639244 LRRC45Q96CN5 670 aa4.9□□□□□ -1.63
SCN3A-209ENST00000639244 TFIP11Q9UBB9 837 aaKnown RBP4.9□□□□□ -1.63
SCN3A-209ENST00000639244 BRD4O60885 1362 aaPredicted RBP4.9□□□□□ -1.63
SCN3A-209ENST00000639244 AFAP1Q8N556 730 aa4.9□□□□□ -1.63
SCN3A-209ENST00000639244 ZSCAN9O15535 394 aaPredicted RBP4.89□□□□□ -1.63
SCN3A-209ENST00000639244 SGTAO43765 313 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 PSME1Q06323 249 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 LARGE2Q8N3Y3 721 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.89□□□□□ -1.63
SCN3A-209ENST00000639244 DHX38Q92620 1227 aaKnown RBP4.89□□□□□ -1.63
SCN3A-209ENST00000639244 TTC14Q96N46 770 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 TSGA10Q9BZW7 698 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 FAM117AQ9C073 453 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 STAG3Q9UJ98 1225 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 ZNF330Q9Y3S2 320 aaPredicted RBP4.89□□□□□ -1.63
SCN3A-209ENST00000639244 TBKBP1A7MCY6 615 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 FIBPO43427 364 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 CYTH3O43739 400 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 CCDC57Q2TAC2 916 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 THUMPD2Q9BTF0 503 aaKnown RBP4.89□□□□□ -1.63
SCN3A-209ENST00000639244 HDAC6Q9UBN7 1215 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 SSX2IPQ9Y2D8 614 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 ATG7O95352 703 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 KRT10P13645 584 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 NAA25Q14CX7 972 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 PPP2R5BQ15173 497 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 LONRF1Q17RB8 773 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 TBC1D25Q3MII6 688 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 NANOGNBQ7Z5D8 188 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 PHACTR1Q9C0D0 580 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 SLC7A5P2Q9GIP4 190 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 NSRP1Q9H0G5 558 aaKnown RBP4.89□□□□□ -1.63
SCN3A-209ENST00000639244 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.89□□□□□ -1.63
SCN3A-209ENST00000639244 SOS1Q07889 1333 aaPredicted RBP4.89□□□□□ -1.63
SCN3A-209ENST00000639244 GRXCR2A6NFK2 248 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 SKIV2LQ15477 1246 aaKnown RBP4.89□□□□□ -1.63
SCN3A-209ENST00000639244 NXNQ6DKJ4 435 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 ACMSDQ8TDX5 336 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 ATPIF1Q9UII2 106 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.89□□□□□ -1.63
SCN3A-209ENST00000639244 SNX2O60749 519 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 MCM4P33991 863 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 SLC30A9Q6PML9 568 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 C11orf74Q86VG3 221 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 A1CFQ9NQ94 594 aaKnown RBP4.89□□□□□ -1.63
SCN3A-209ENST00000639244 DISC1Q9NRI5 854 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 ARPC4-TTLL3A0A0A6YYG9 625 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 LINC00854A0A1B0GVQ3 168 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 TRIM66O15016 1216 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 DUSP27Q5VZP5 1158 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 KCNV1Q6PIU1 500 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 SNX32Q86XE0 403 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 POTEDQ86YR6 584 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 KIAA1958Q8N8K9 716 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 RNASEH2AO75792 299 aaKnown RBP4.89□□□□□ -1.63
SCN3A-209ENST00000639244 PTK7Q13308 1070 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 IMMTQ16891 758 aaKnown RBP4.89□□□□□ -1.63
SCN3A-209ENST00000639244 EGFLAMQ63HQ2 1017 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 THOC7Q6I9Y2 204 aaKnown RBP4.89□□□□□ -1.63
SCN3A-209ENST00000639244 ZNF449Q6P9G9 518 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.89□□□□□ -1.63
SCN3A-209ENST00000639244 ZNF397Q8NF99 534 aaPredicted RBP4.89□□□□□ -1.63
SCN3A-209ENST00000639244 CEP131Q9UPN4 1083 aa4.89□□□□□ -1.63
SCN3A-209ENST00000639244 PLEKHG3A1L390 1219 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 H0Y3Z8 333 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 FAM133BQ5BKY9 247 aaKnown RBP4.88□□□□□ -1.63
SCN3A-209ENST00000639244 MCM10Q7L590 875 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 RNF10Q8N5U6 811 aaKnown RBP4.88□□□□□ -1.63
SCN3A-209ENST00000639244 KIAA1524Q8TCG1 905 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 MMADHCQ9H3L0 296 aaPredicted RBP4.88□□□□□ -1.63
SCN3A-209ENST00000639244 MTUS1Q9ULD2 1270 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 FOXN3O00409 490 aaPredicted RBP4.88□□□□□ -1.63
SCN3A-209ENST00000639244 NDUFAB1O14561 156 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 ZNF16P17020 682 aaPredicted RBP4.88□□□□□ -1.63
SCN3A-209ENST00000639244 WHAMMP3Q1A5X7 153 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 SDE2Q6IQ49 451 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 BICD2Q8TD16 824 aa4.88□□□□□ -1.63
SCN3A-209ENST00000639244 ANKRD49Q8WVL7 239 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms