RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 ARID3CA6NKF2 412 aa7.43□□□□□ -1.22
CCDC7-211ENST00000638889 EIF4EBP3O60516 100 aaPredicted RBP7.43□□□□□ -1.22
CCDC7-211ENST00000638889 PHACTR2O75167 634 aa7.43□□□□□ -1.22
CCDC7-211ENST00000638889 TNFRSF21O75509 655 aa7.43□□□□□ -1.22
CCDC7-211ENST00000638889 TRPA1O75762 1119 aa7.43□□□□□ -1.22
CCDC7-211ENST00000638889 PREPP48147 710 aa7.43□□□□□ -1.22
CCDC7-211ENST00000638889 NLRP12P59046 1061 aa7.43□□□□□ -1.22
CCDC7-211ENST00000638889 SF3B2Q13435 895 aaKnown RBP7.43□□□□□ -1.22
CCDC7-211ENST00000638889 IKBKEQ14164 716 aa7.43□□□□□ -1.22
CCDC7-211ENST00000638889 BEND4Q6ZU67 534 aa7.43□□□□□ -1.22
CCDC7-211ENST00000638889 KRTAP4-12Q9BQ66 201 aa7.43□□□□□ -1.22
CCDC7-211ENST00000638889 SOX17Q9H6I2 414 aaPredicted RBP7.43□□□□□ -1.22
CCDC7-211ENST00000638889 PRR19A6NJB7 356 aa7.42□□□□□ -1.22
CCDC7-211ENST00000638889 SOX1O00570 391 aaPredicted RBP7.42□□□□□ -1.22
CCDC7-211ENST00000638889 EREGO14944 169 aa7.42□□□□□ -1.22
CCDC7-211ENST00000638889 AAMPQ13685 434 aa7.42□□□□□ -1.22
CCDC7-211ENST00000638889 VN1R5Q7Z5H4 357 aa7.42□□□□□ -1.22
CCDC7-211ENST00000638889 ZKSCAN3Q9BRR0 538 aa7.42□□□□□ -1.22
CCDC7-211ENST00000638889 BHLHE41Q9C0J9 482 aaPredicted RBP7.42□□□□□ -1.22
CCDC7-211ENST00000638889 KCNF1Q9H3M0 494 aa7.42□□□□□ -1.22
CCDC7-211ENST00000638889 SPINK2P20155 84 aa7.41□□□□□ -1.22
CCDC7-211ENST00000638889 DTX1Q86Y01 620 aa7.41□□□□□ -1.22
CCDC7-211ENST00000638889 SUGCTQ9HAC7 445 aa7.41□□□□□ -1.22
CCDC7-211ENST00000638889 GAS2O43903 313 aaKnown RBP7.4□□□□□ -1.22
CCDC7-211ENST00000638889 IRAK1P51617 712 aa7.4□□□□□ -1.22
CCDC7-211ENST00000638889 GP2P55259 537 aaKnown RBP7.4□□□□□ -1.22
CCDC7-211ENST00000638889 FKBP4Q02790 459 aaKnown RBP eCLIP7.4□□□□□ -1.22
CCDC7-211ENST00000638889 MTMR3Q13615 1198 aa7.4□□□□□ -1.22
CCDC7-211ENST00000638889 NUTM2GQ5VZR2 741 aa7.4□□□□□ -1.22
CCDC7-211ENST00000638889 CCDC82Q8N4S0 544 aa7.4□□□□□ -1.22
CCDC7-211ENST00000638889 SMG8Q8ND04 991 aaKnown RBP7.4□□□□□ -1.22
CCDC7-211ENST00000638889 SHKBP1Q8TBC3 707 aa7.4□□□□□ -1.22
CCDC7-211ENST00000638889 TMPRSS13Q9BYE2 586 aa7.4□□□□□ -1.22
CCDC7-211ENST00000638889 CYP4F12Q9HCS2 524 aa7.4□□□□□ -1.22
CCDC7-211ENST00000638889 AMOTL2Q9Y2J4 779 aa7.4□□□□□ -1.22
CCDC7-211ENST00000638889 PAX4O43316 350 aa7.39□□□□□ -1.23
CCDC7-211ENST00000638889 FZD6O60353 706 aa7.39□□□□□ -1.23
CCDC7-211ENST00000638889 HGSNATQ68CP4 663 aa7.39□□□□□ -1.23
CCDC7-211ENST00000638889 GIMAP7Q8NHV1 300 aa7.39□□□□□ -1.23
CCDC7-211ENST00000638889 MAP4P27816 1152 aaKnown RBP7.38□□□□□ -1.23
CCDC7-211ENST00000638889 GJD3Q8N144 294 aa7.38□□□□□ -1.23
CCDC7-211ENST00000638889 C12orf50Q8NA57 414 aaPredicted RBP7.38□□□□□ -1.23
CCDC7-211ENST00000638889 FOXD3Q9UJU5 478 aaPredicted RBP7.38□□□□□ -1.23
CCDC7-211ENST00000638889 OAS3Q9Y6K5 1087 aaKnown RBP7.38□□□□□ -1.23
CCDC7-211ENST00000638889 LOC100289279A0A1B0GTE1 492 aa7.37□□□□□ -1.23
CCDC7-211ENST00000638889 TIAF1O95411 115 aa7.37□□□□□ -1.23
CCDC7-211ENST00000638889 ESRRAP11474 423 aaPredicted RBP7.37□□□□□ -1.23
CCDC7-211ENST00000638889 CPSF6Q16630 551 aaKnown RBP eCLIP7.37□□□□□ -1.23
CCDC7-211ENST00000638889 EXOSC6Q5RKV6 272 aaKnown RBP7.37□□□□□ -1.23
CCDC7-211ENST00000638889 PEAR1Q5VY43 1037 aaPredicted RBP7.37□□□□□ -1.23
CCDC7-211ENST00000638889 PHLDB3Q6NSJ2 640 aa7.37□□□□□ -1.23
CCDC7-211ENST00000638889 KRTAP1-3Q8IUG1 177 aa7.37□□□□□ -1.23
CCDC7-211ENST00000638889 ASAP3Q8TDY4 903 aa7.37□□□□□ -1.23
CCDC7-211ENST00000638889 USP26Q9BXU7 913 aa7.37□□□□□ -1.23
CCDC7-211ENST00000638889 ZFYVE28Q9HCC9 887 aa7.37□□□□□ -1.23
CCDC7-211ENST00000638889 WDR64B1ANS9 1081 aa7.36□□□□□ -1.23
CCDC7-211ENST00000638889 WNT11O96014 354 aa7.36□□□□□ -1.23
CCDC7-211ENST00000638889 GOLGA2P5Q9HBQ8 144 aa7.36□□□□□ -1.23
CCDC7-211ENST00000638889 RXRBP28702 533 aa7.35□□□□□ -1.23
CCDC7-211ENST00000638889 SGO2Q562F6 1265 aa7.35□□□□□ -1.23
CCDC7-211ENST00000638889 LCE3BQ5TA77 95 aa7.35□□□□□ -1.23
CCDC7-211ENST00000638889 FMNL2Q96PY5 1086 aa7.35□□□□□ -1.23
CCDC7-211ENST00000638889 ATG3Q9NT62 314 aa7.35□□□□□ -1.23
CCDC7-211ENST00000638889 PIM2Q9P1W9 311 aa7.35□□□□□ -1.23
CCDC7-211ENST00000638889 GTF3C3Q9Y5Q9 886 aa7.35□□□□□ -1.23
CCDC7-211ENST00000638889 TXKP42681 527 aa7.34□□□□□ -1.23
CCDC7-211ENST00000638889 MFSD14AQ96MC6 490 aa7.34□□□□□ -1.23
CCDC7-211ENST00000638889 LATS2Q9NRM7 1088 aa7.34□□□□□ -1.23
CCDC7-211ENST00000638889 CCDC87Q9NVE4 849 aa7.34□□□□□ -1.23
CCDC7-211ENST00000638889 EGFL7Q9UHF1 273 aa7.34□□□□□ -1.23
CCDC7-211ENST00000638889 FAM95CA0A1B0GW59 222 aa7.33□□□□□ -1.24
CCDC7-211ENST00000638889 ADAMTS4O75173 837 aa7.33□□□□□ -1.24
CCDC7-211ENST00000638889 DLGAP3O95886 979 aa7.33□□□□□ -1.24
CCDC7-211ENST00000638889 ABL1P00519 1130 aa7.33□□□□□ -1.24
CCDC7-211ENST00000638889 TAL1P17542 331 aaPredicted RBP7.33□□□□□ -1.24
CCDC7-211ENST00000638889 GSTM4Q03013 218 aa7.33□□□□□ -1.24
CCDC7-211ENST00000638889 PAOXQ6QHF9 649 aa7.33□□□□□ -1.24
CCDC7-211ENST00000638889 CCNJLQ8IV13 435 aa7.33□□□□□ -1.24
CCDC7-211ENST00000638889 GALNT12Q8IXK2 581 aa7.33□□□□□ -1.24
CCDC7-211ENST00000638889 YIPF2Q9BWQ6 316 aa7.33□□□□□ -1.24
CCDC7-211ENST00000638889 CLEC4MQ9H2X3 399 aaPredicted RBP7.33□□□□□ -1.24
CCDC7-211ENST00000638889 ZFYVE1Q9HBF4 777 aa7.33□□□□□ -1.24
CCDC7-211ENST00000638889 LEMD3Q9Y2U8 911 aa7.33□□□□□ -1.24
CCDC7-211ENST00000638889 A0A096LPE4 126 aa7.32□□□□□ -1.24
CCDC7-211ENST00000638889 A0A1W2PPZ6 126 aa7.32□□□□□ -1.24
CCDC7-211ENST00000638889 F13BP05160 661 aa7.32□□□□□ -1.24
CCDC7-211ENST00000638889 NEFLP07196 543 aa7.32□□□□□ -1.24
CCDC7-211ENST00000638889 USP11P51784 963 aa7.32□□□□□ -1.24
CCDC7-211ENST00000638889 SOX4Q06945 474 aaPredicted RBP7.32□□□□□ -1.24
CCDC7-211ENST00000638889 HP1BP3Q5SSJ5 553 aaPredicted RBP7.32□□□□□ -1.24
CCDC7-211ENST00000638889 B4GALNT3Q6L9W6 998 aa7.32□□□□□ -1.24
CCDC7-211ENST00000638889 METTL22Q9BUU2 404 aaPredicted RBP7.32□□□□□ -1.24
CCDC7-211ENST00000638889 OSBPL1AQ9BXW6 950 aa7.32□□□□□ -1.24
CCDC7-211ENST00000638889 NRSN2Q9GZP1 204 aa7.32□□□□□ -1.24
CCDC7-211ENST00000638889 CYP11A1P05108 521 aa7.31□□□□□ -1.24
CCDC7-211ENST00000638889 FOSL1P15407 271 aa7.31□□□□□ -1.24
CCDC7-211ENST00000638889 PCDH1Q08174 1060 aa7.31□□□□□ -1.24
CCDC7-211ENST00000638889 NFKBIBQ15653 356 aa7.31□□□□□ -1.24
CCDC7-211ENST00000638889 KRTAP19-1Q8IUB9 90 aa7.31□□□□□ -1.24
CCDC7-211ENST00000638889 C2CD4AQ8NCU7 369 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms