RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 MAP9Q49MG5 647 aa13.82□□□□□ -0.2
CAPN3-221ENST00000638141 LARP1Q6PKG0 1096 aaKnown RBP13.82□□□□□ -0.2
CAPN3-221ENST00000638141 CTCFLQ8NI51 663 aaPredicted RBP13.82□□□□□ -0.2
CAPN3-221ENST00000638141 TBX22Q9Y458 520 aa13.82□□□□□ -0.2
CAPN3-221ENST00000638141 MON2Q7Z3U7 1717 aa13.82□□□□□ -0.2
CAPN3-221ENST00000638141 EXOC5O00471 708 aa13.81□□□□□ -0.2
CAPN3-221ENST00000638141 IKBKBO14920 756 aa13.81□□□□□ -0.2
CAPN3-221ENST00000638141 CBFA2T2O43439 604 aa13.81□□□□□ -0.2
CAPN3-221ENST00000638141 NEDD9Q14511 834 aa13.81□□□□□ -0.2
CAPN3-221ENST00000638141 MCM6Q14566 821 aa13.81□□□□□ -0.2
CAPN3-221ENST00000638141 CCAR1Q8IX12 1150 aaKnown RBP13.81□□□□□ -0.2
CAPN3-221ENST00000638141 NECAB1Q8N987 351 aa13.81□□□□□ -0.2
CAPN3-221ENST00000638141 BICC1Q9H694 974 aaKnown RBP13.81□□□□□ -0.2
CAPN3-221ENST00000638141 RGPD1P0DJD0 1748 aa13.81□□□□□ -0.2
CAPN3-221ENST00000638141 CPA1P15085 419 aa13.81□□□□□ -0.2
CAPN3-221ENST00000638141 GPTP24298 496 aa13.81□□□□□ -0.2
CAPN3-221ENST00000638141 CHMP4BP1P59074 171 aa13.81□□□□□ -0.2
CAPN3-221ENST00000638141 SF3B2Q13435 895 aaKnown RBP13.81□□□□□ -0.2
CAPN3-221ENST00000638141 ADCK5Q3MIX3 580 aa13.81□□□□□ -0.2
CAPN3-221ENST00000638141 SLC4A10Q6U841 1118 aa13.81□□□□□ -0.2
CAPN3-221ENST00000638141 GBP6Q6ZN66 633 aa13.81□□□□□ -0.2
CAPN3-221ENST00000638141 ERCC4Q92889 916 aaPredicted RBP13.81□□□□□ -0.2
CAPN3-221ENST00000638141 MIEF2Q96C03 454 aa13.81□□□□□ -0.2
CAPN3-221ENST00000638141 STK31Q9BXU1 1019 aa13.81□□□□□ -0.2
CAPN3-221ENST00000638141 ZNF335Q9H4Z2 1342 aaPredicted RBP13.8□□□□□ -0.2
CAPN3-221ENST00000638141 IFIT2P09913 472 aaKnown RBP13.8□□□□□ -0.2
CAPN3-221ENST00000638141 CASP8Q14790 479 aa13.8□□□□□ -0.2
CAPN3-221ENST00000638141 AFAP1L1Q8TED9 768 aa13.8□□□□□ -0.2
CAPN3-221ENST00000638141 SGSM3Q96HU1 749 aa13.8□□□□□ -0.2
CAPN3-221ENST00000638141 CDK19Q9BWU1 502 aa13.8□□□□□ -0.2
CAPN3-221ENST00000638141 FAM204AQ9H8W3 233 aa13.8□□□□□ -0.2
CAPN3-221ENST00000638141 BSDC1Q9NW68 430 aaPredicted RBP13.8□□□□□ -0.2
CAPN3-221ENST00000638141 EMILIN1Q9Y6C2 1016 aa13.8□□□□□ -0.2
CAPN3-221ENST00000638141 CUTAO60888 179 aa13.8□□□□□ -0.2
CAPN3-221ENST00000638141 GNG11P61952 73 aa13.8□□□□□ -0.2
CAPN3-221ENST00000638141 IRX1P78414 480 aaPredicted RBP13.8□□□□□ -0.2
CAPN3-221ENST00000638141 TMEM139Q8IV31 216 aa13.8□□□□□ -0.2
CAPN3-221ENST00000638141 GIMAP7Q8NHV1 300 aa13.8□□□□□ -0.2
CAPN3-221ENST00000638141 RHPN1Q8TCX5 695 aa13.8□□□□□ -0.2
CAPN3-221ENST00000638141 WDR24Q96S15 920 aa13.8□□□□□ -0.2
CAPN3-221ENST00000638141 CABP1Q9NZU7 370 aa13.8□□□□□ -0.2
CAPN3-221ENST00000638141 N4BP1O75113 896 aaKnown RBP13.79□□□□□ -0.2
CAPN3-221ENST00000638141 ELF1P32519 619 aa13.79□□□□□ -0.2
CAPN3-221ENST00000638141 ADD1P35611 737 aaKnown RBP13.79□□□□□ -0.2
CAPN3-221ENST00000638141 PLEKHO1Q53GL0 409 aaPredicted RBP13.79□□□□□ -0.2
CAPN3-221ENST00000638141 PRPF40BQ6NWY9 871 aaKnown RBP13.79□□□□□ -0.2
CAPN3-221ENST00000638141 CABS1Q96KC9 395 aa13.79□□□□□ -0.2
CAPN3-221ENST00000638141 GOLPH3LQ9H4A5 285 aa13.79□□□□□ -0.2
CAPN3-221ENST00000638141 HMG20BQ9P0W2 317 aa13.79□□□□□ -0.2
CAPN3-221ENST00000638141 MCM8Q9UJA3 840 aa13.79□□□□□ -0.2
CAPN3-221ENST00000638141 MINK1Q8N4C8 1332 aaPredicted RBP13.79□□□□□ -0.2
CAPN3-221ENST00000638141 LRRC37A3O60309 1634 aa13.79□□□□□ -0.2
CAPN3-221ENST00000638141 KLHL33A6NCF5 533 aa13.79□□□□□ -0.2
CAPN3-221ENST00000638141 PRPF6O94906 941 aaKnown RBP13.79□□□□□ -0.2
CAPN3-221ENST00000638141 DCTN1Q14203 1278 aa13.79□□□□□ -0.2
CAPN3-221ENST00000638141 NCAPHQ15003 741 aa13.79□□□□□ -0.2
CAPN3-221ENST00000638141 NAA16Q6N069 864 aaPredicted RBP13.79□□□□□ -0.2
CAPN3-221ENST00000638141 CWC27Q6UX04 472 aaKnown RBP13.79□□□□□ -0.2
CAPN3-221ENST00000638141 DHX58Q96C10 678 aa13.79□□□□□ -0.2
CAPN3-221ENST00000638141 EBAG9O00559 213 aa13.78□□□□□ -0.2
CAPN3-221ENST00000638141 FANCCQ00597 558 aa13.78□□□□□ -0.2
CAPN3-221ENST00000638141 CREB3L3Q68CJ9 461 aa13.78□□□□□ -0.2
CAPN3-221ENST00000638141 AMOTL1Q8IY63 956 aa13.78□□□□□ -0.2
CAPN3-221ENST00000638141 XAGE2Q96GT9 111 aa13.78□□□□□ -0.2
CAPN3-221ENST00000638141 FAXDC2Q96IV6 333 aa13.78□□□□□ -0.2
CAPN3-221ENST00000638141 ABCB6Q9NP58 842 aa13.78□□□□□ -0.2
CAPN3-221ENST00000638141 FAM169AQ9Y6X4 670 aa13.78□□□□□ -0.2
CAPN3-221ENST00000638141 JCADQ9P266 1359 aa13.78□□□□□ -0.2
CAPN3-221ENST00000638141 DIP2AQ14689 1571 aa13.78□□□□□ -0.2
CAPN3-221ENST00000638141 PTPRUQ92729 1446 aa13.78□□□□□ -0.2
CAPN3-221ENST00000638141 STX10O60499 249 aa13.78□□□□□ -0.2
CAPN3-221ENST00000638141 RPS6KB1P23443 525 aa13.78□□□□□ -0.2
CAPN3-221ENST00000638141 BLOC1S2Q6QNY1 142 aa13.78□□□□□ -0.2
CAPN3-221ENST00000638141 G2E3Q7L622 706 aa13.78□□□□□ -0.2
CAPN3-221ENST00000638141 FMNL3Q8IVF7 1028 aa13.78□□□□□ -0.2
CAPN3-221ENST00000638141 VSTM4Q8IW00 320 aa13.78□□□□□ -0.2
CAPN3-221ENST00000638141 RNF217Q8TC41 542 aa13.78□□□□□ -0.2
CAPN3-221ENST00000638141 MAP4K1Q92918 833 aa13.78□□□□□ -0.2
CAPN3-221ENST00000638141 GPATCH3Q96I76 525 aa13.78□□□□□ -0.2
CAPN3-221ENST00000638141 ZNF396Q96N95 335 aaPredicted RBP13.78□□□□□ -0.2
CAPN3-221ENST00000638141 LLPHQ9BRT6 129 aaKnown RBP13.78□□□□□ -0.2
CAPN3-221ENST00000638141 STK26Q9P289 416 aa13.78□□□□□ -0.2
CAPN3-221ENST00000638141 CDC23Q9UJX2 597 aa13.78□□□□□ -0.2
CAPN3-221ENST00000638141 SPG7Q9UQ90 795 aa13.78□□□□□ -0.2
CAPN3-221ENST00000638141 STRCP1A6NGW2 1772 aa13.77□□□□□ -0.2
CAPN3-221ENST00000638141 F6X3S4 739 aa13.77□□□□□ -0.21
CAPN3-221ENST00000638141 CHUKO15111 745 aa13.77□□□□□ -0.21
CAPN3-221ENST00000638141 UBTFL1P0CB47 393 aaPredicted RBP13.77□□□□□ -0.21
CAPN3-221ENST00000638141 MRPL12P52815 198 aaKnown RBP13.77□□□□□ -0.21
CAPN3-221ENST00000638141 PREPLQ4J6C6 727 aaPredicted RBP13.77□□□□□ -0.21
CAPN3-221ENST00000638141 NUTM1Q86Y26 1132 aa13.77□□□□□ -0.21
CAPN3-221ENST00000638141 KIAA1468Q9P260 1216 aa13.77□□□□□ -0.21
CAPN3-221ENST00000638141 A0A1W2PQ27 194 aa13.76□□□□□ -0.21
CAPN3-221ENST00000638141 A0A1W2PQ64 194 aa13.76□□□□□ -0.21
CAPN3-221ENST00000638141 A0A1W2PQD8 194 aa13.76□□□□□ -0.21
CAPN3-221ENST00000638141 ANKRD65E5RJM6 399 aa13.76□□□□□ -0.21
CAPN3-221ENST00000638141 LIG3P49916 1009 aa13.76□□□□□ -0.21
CAPN3-221ENST00000638141 NLRP12P59046 1061 aa13.76□□□□□ -0.21
CAPN3-221ENST00000638141 PTH1RQ03431 593 aa13.76□□□□□ -0.21
CAPN3-221ENST00000638141 PPP2R5AQ15172 486 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms