RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 IFFO2Q5TF58 517 aa25.37■■□□□ 1.65
CLN6-224ENST00000638076 ELP1O95163 1332 aa25.37■■□□□ 1.65
CLN6-224ENST00000638076 CICQ96RK0 1608 aaPredicted RBP25.37■■□□□ 1.65
CLN6-224ENST00000638076 SNAP23O00161 211 aa25.37■■□□□ 1.65
CLN6-224ENST00000638076 SLC5A1P13866 664 aa25.37■■□□□ 1.65
CLN6-224ENST00000638076 PDIA3P30101 505 aaKnown RBP25.37■■□□□ 1.65
CLN6-224ENST00000638076 ZNF274Q96GC6 653 aaPredicted RBP25.37■■□□□ 1.65
CLN6-224ENST00000638076 UBE3CQ15386 1083 aa25.36■■□□□ 1.65
CLN6-224ENST00000638076 FBXL16Q8N461 479 aa25.36■■□□□ 1.65
CLN6-224ENST00000638076 NCOA5Q9HCD5 579 aaKnown RBP25.36■■□□□ 1.65
CLN6-224ENST00000638076 PTPDC1A2A3K4 754 aa25.36■■□□□ 1.65
CLN6-224ENST00000638076 ZNF213O14771 459 aa25.36■■□□□ 1.65
CLN6-224ENST00000638076 SCAND2PQ9GZW5 306 aaPredicted RBP25.36■■□□□ 1.65
CLN6-224ENST00000638076 TFIP11Q9UBB9 837 aaKnown RBP25.36■■□□□ 1.65
CLN6-224ENST00000638076 HMGN5P82970 282 aaKnown RBP25.35■■□□□ 1.65
CLN6-224ENST00000638076 PDLIM2Q96JY6 352 aa25.35■■□□□ 1.65
CLN6-224ENST00000638076 ZNF532Q9HCE3 1301 aa25.35■■□□□ 1.65
CLN6-224ENST00000638076 ATRNO75882 1429 aa25.35■■□□□ 1.65
CLN6-224ENST00000638076 RESTQ13127 1097 aa25.35■■□□□ 1.65
CLN6-224ENST00000638076 DDX60Q8IY21 1712 aaKnown RBP25.34■■□□□ 1.65
CLN6-224ENST00000638076 PDE6AP16499 860 aa25.34■■□□□ 1.65
CLN6-224ENST00000638076 GPHNQ9NQX3 736 aaPredicted RBP25.34■■□□□ 1.65
CLN6-224ENST00000638076 WWC3Q9ULE0 1092 aa25.34■■□□□ 1.65
CLN6-224ENST00000638076 IGHMBP2P38935 993 aaKnown RBP25.34■■□□□ 1.65
CLN6-224ENST00000638076 MB21D2Q8IYB1 491 aaPredicted RBP25.34■■□□□ 1.65
CLN6-224ENST00000638076 SPATA5Q8NB90 893 aa25.34■■□□□ 1.65
CLN6-224ENST00000638076 NCOA7Q8NI08 942 aa25.34■■□□□ 1.65
CLN6-224ENST00000638076 SPATA32Q96LK8 384 aa25.34■■□□□ 1.65
CLN6-224ENST00000638076 ZNF652Q9Y2D9 606 aa25.34■■□□□ 1.65
CLN6-224ENST00000638076 PRC1O43663 620 aa25.33■■□□□ 1.65
CLN6-224ENST00000638076 MCM5P33992 734 aa25.33■■□□□ 1.65
CLN6-224ENST00000638076 ARAP2Q8WZ64 1704 aa25.33■■□□□ 1.64
CLN6-224ENST00000638076 CLCN1P35523 988 aa25.32■■□□□ 1.64
CLN6-224ENST00000638076 EVCP57679 992 aa25.32■■□□□ 1.64
CLN6-224ENST00000638076 ZSCAN16Q9H4T2 348 aaPredicted RBP25.32■■□□□ 1.64
CLN6-224ENST00000638076 MYO5AQ9Y4I1 1855 aaKnown RBP25.32■■□□□ 1.64
CLN6-224ENST00000638076 RASGRF1Q13972 1273 aa25.32■■□□□ 1.64
CLN6-224ENST00000638076 RALYLQ86SE5 291 aaKnown RBP25.32■■□□□ 1.64
CLN6-224ENST00000638076 LINC00116Q8NCU8 138 aa25.32■■□□□ 1.64
CLN6-224ENST00000638076 LEO1Q8WVC0 666 aaPredicted RBP25.32■■□□□ 1.64
CLN6-224ENST00000638076 KIF3AQ9Y496 699 aa25.32■■□□□ 1.64
CLN6-224ENST00000638076 SALL1Q9NSC2 1324 aa25.32■■□□□ 1.64
CLN6-224ENST00000638076 RTL9Q8NET4 1388 aa25.32■■□□□ 1.64
CLN6-224ENST00000638076 TCRBV5S4A2TA0A5A2 114 aa25.31■■□□□ 1.64
CLN6-224ENST00000638076 C8orf37Q96NL8 207 aa25.31■■□□□ 1.64
CLN6-224ENST00000638076 APPP05067 770 aa25.31■■□□□ 1.64
CLN6-224ENST00000638076 FOSBP53539 338 aa25.31■■□□□ 1.64
CLN6-224ENST00000638076 GIMAP6Q6P9H5 292 aa25.31■■□□□ 1.64
CLN6-224ENST00000638076 PPFIA3O75145 1194 aa25.3■■□□□ 1.64
CLN6-224ENST00000638076 NAA16Q6N069 864 aaPredicted RBP25.3■■□□□ 1.64
CLN6-224ENST00000638076 KCNQ4P56696 695 aa25.3■■□□□ 1.64
CLN6-224ENST00000638076 ANTXR2P58335 489 aa25.3■■□□□ 1.64
CLN6-224ENST00000638076 CLEC4GQ6UXB4 293 aa25.3■■□□□ 1.64
CLN6-224ENST00000638076 CHMP4CQ96CF2 233 aa25.3■■□□□ 1.64
CLN6-224ENST00000638076 NGLY1Q96IV0 654 aa25.3■■□□□ 1.64
CLN6-224ENST00000638076 NBPF3Q9H094 633 aa25.3■■□□□ 1.64
CLN6-224ENST00000638076 COL5A3P25940 1745 aaPredicted RBP25.3■■□□□ 1.64
CLN6-224ENST00000638076 AIDAQ96BJ3 306 aa25.29■■□□□ 1.64
CLN6-224ENST00000638076 GOLGA6L4A6NEF3 574 aa25.29■■□□□ 1.64
CLN6-224ENST00000638076 BCAMP50895 628 aa25.28■■□□□ 1.64
CLN6-224ENST00000638076 CHRNDQ07001 517 aa25.28■■□□□ 1.64
CLN6-224ENST00000638076 MAP3K12Q12852 859 aa25.28■■□□□ 1.64
CLN6-224ENST00000638076 VPS72Q15906 364 aa25.28■■□□□ 1.64
CLN6-224ENST00000638076 LIG1P18858 919 aa25.28■■□□□ 1.64
CLN6-224ENST00000638076 MAGEB6Q8N7X4 407 aa25.28■■□□□ 1.64
CLN6-224ENST00000638076 STRBPQ96SI9 672 aaKnown RBP25.28■■□□□ 1.64
CLN6-224ENST00000638076 BCL9LQ86UU0 1499 aa25.27■■□□□ 1.64
CLN6-224ENST00000638076 KLF18A0A0U1RQI7 1052 aa25.27■■□□□ 1.64
CLN6-224ENST00000638076 TRDNQ13061 729 aa25.27■■□□□ 1.64
CLN6-224ENST00000638076 TBC1D10CQ8IV04 446 aa25.27■■□□□ 1.64
CLN6-224ENST00000638076 FUCA2Q9BTY2 467 aa25.27■■□□□ 1.64
CLN6-224ENST00000638076 LAMB2P55268 1798 aa25.27■■□□□ 1.64
CLN6-224ENST00000638076 KLHL34Q8N239 644 aa25.26■■□□□ 1.63
CLN6-224ENST00000638076 DENND2AQ9ULE3 1009 aa25.26■■□□□ 1.63
CLN6-224ENST00000638076 CARMIL3Q8ND23 1372 aa25.26■■□□□ 1.63
CLN6-224ENST00000638076 BCORQ6W2J9 1755 aa25.26■■□□□ 1.63
CLN6-224ENST00000638076 WDR19Q8NEZ3 1342 aa25.26■■□□□ 1.63
CLN6-224ENST00000638076 ERFEQ4G0M1 354 aa25.26■■□□□ 1.63
CLN6-224ENST00000638076 CFAP45Q9UL16 551 aa25.26■■□□□ 1.63
CLN6-224ENST00000638076 GOLGA8BA8MQT2 603 aa25.25■■□□□ 1.63
CLN6-224ENST00000638076 CDC5LQ99459 802 aaKnown RBP25.25■■□□□ 1.63
CLN6-224ENST00000638076 FDPSP14324 419 aaKnown RBP25.25■■□□□ 1.63
CLN6-224ENST00000638076 UVSSAQ2YD98 709 aa25.25■■□□□ 1.63
CLN6-224ENST00000638076 HS1BP3Q53T59 392 aa25.25■■□□□ 1.63
CLN6-224ENST00000638076 HPS5Q9UPZ3 1129 aa25.25■■□□□ 1.63
CLN6-224ENST00000638076 PTF1AQ7RTS3 328 aa25.24■■□□□ 1.63
CLN6-224ENST00000638076 ZSCAN30Q86W11 494 aa25.24■■□□□ 1.63
CLN6-224ENST00000638076 PGBD1Q96JS3 809 aa25.24■■□□□ 1.63
CLN6-224ENST00000638076 ZNF831Q5JPB2 1677 aa25.23■■□□□ 1.63
CLN6-224ENST00000638076 DHX16O60231 1041 aaKnown RBP25.23■■□□□ 1.63
CLN6-224ENST00000638076 MBD4O95243 580 aa25.23■■□□□ 1.63
CLN6-224ENST00000638076 ADD1P35611 737 aaKnown RBP25.23■■□□□ 1.63
CLN6-224ENST00000638076 GUCY1B3Q02153 619 aa25.23■■□□□ 1.63
CLN6-224ENST00000638076 C3orf67Q6ZVT6 689 aa25.23■■□□□ 1.63
CLN6-224ENST00000638076 RAB11FIP4Q86YS3 637 aa25.23■■□□□ 1.63
CLN6-224ENST00000638076 NUP62CLQ9H1M0 184 aa25.23■■□□□ 1.63
CLN6-224ENST00000638076 COL4A1P02462 1669 aa25.23■■□□□ 1.63
CLN6-224ENST00000638076 PATL2C9JE40 543 aaKnown RBP25.23■■□□□ 1.63
CLN6-224ENST00000638076 UBAP1LF5GYI3 381 aa25.23■■□□□ 1.63
CLN6-224ENST00000638076 BICDL1Q6ZP65 573 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms