RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 SLC51AQ86UW1 340 aa14.18□□□□□ -0.14
CLN6-223ENST00000637823 TTLL6Q8N841 843 aa14.18□□□□□ -0.14
CLN6-223ENST00000637823 SGIP1Q9BQI5 828 aa14.18□□□□□ -0.14
CLN6-223ENST00000637823 LSG1Q9H089 658 aaKnown RBP14.18□□□□□ -0.14
CLN6-223ENST00000637823 IL25Q9H293 177 aa14.18□□□□□ -0.14
CLN6-223ENST00000637823 IQSEC3Q9UPP2 1182 aaPredicted RBP14.18□□□□□ -0.14
CLN6-223ENST00000637823 MED23Q9ULK4 1368 aa14.18□□□□□ -0.14
CLN6-223ENST00000637823 KIAA1551Q9HCM1 1747 aa14.18□□□□□ -0.14
CLN6-223ENST00000637823 A0A0G2JLW4 131 aa14.17□□□□□ -0.14
CLN6-223ENST00000637823 DPEP1P16444 411 aa14.17□□□□□ -0.14
CLN6-223ENST00000637823 KCNA3P22001 575 aa14.17□□□□□ -0.14
CLN6-223ENST00000637823 MCCP23508 829 aa14.17□□□□□ -0.14
CLN6-223ENST00000637823 MAP3K12Q12852 859 aa14.17□□□□□ -0.14
CLN6-223ENST00000637823 TDRD7Q8NHU6 1098 aaKnown RBP14.17□□□□□ -0.14
CLN6-223ENST00000637823 C7orf43Q8WVR3 580 aa14.17□□□□□ -0.14
CLN6-223ENST00000637823 CHD4Q14839 1912 aa14.16□□□□□ -0.14
CLN6-223ENST00000637823 IGSF3O75054 1194 aa14.16□□□□□ -0.14
CLN6-223ENST00000637823 IDH1O75874 414 aaKnown RBP14.16□□□□□ -0.14
CLN6-223ENST00000637823 IL1R1P14778 569 aa14.16□□□□□ -0.14
CLN6-223ENST00000637823 ADD2P35612 726 aa14.16□□□□□ -0.14
CLN6-223ENST00000637823 UBE3CQ15386 1083 aa14.16□□□□□ -0.14
CLN6-223ENST00000637823 SLC9C2Q5TAH2 1124 aa14.16□□□□□ -0.14
CLN6-223ENST00000637823 EYA3Q99504 573 aa14.16□□□□□ -0.14
CLN6-223ENST00000637823 ZC3H12CQ9C0D7 883 aaKnown RBP14.16□□□□□ -0.14
CLN6-223ENST00000637823 LRP2BPQ9P2M1 347 aa14.16□□□□□ -0.14
CLN6-223ENST00000637823 CD2APQ9Y5K6 639 aa14.16□□□□□ -0.14
CLN6-223ENST00000637823 BRCA1P38398 1863 aaKnown RBP14.16□□□□□ -0.14
CLN6-223ENST00000637823 DUOX1Q9NRD9 1551 aa14.15□□□□□ -0.14
CLN6-223ENST00000637823 PDE6AP16499 860 aa14.15□□□□□ -0.14
CLN6-223ENST00000637823 SPTY2D1Q68D10 685 aaPredicted RBP14.15□□□□□ -0.14
CLN6-223ENST00000637823 TMED8Q6PL24 325 aaPredicted RBP14.15□□□□□ -0.14
CLN6-223ENST00000637823 OLFM4Q6UX06 510 aa14.15□□□□□ -0.14
CLN6-223ENST00000637823 WDR66Q8TBY9 1149 aa14.15□□□□□ -0.14
CLN6-223ENST00000637823 APPBP2Q92624 585 aa14.15□□□□□ -0.14
CLN6-223ENST00000637823 GPR101Q96P66 508 aaPredicted RBP14.15□□□□□ -0.14
CLN6-223ENST00000637823 RTFDC1Q9BY42 306 aaPredicted RBP14.15□□□□□ -0.14
CLN6-223ENST00000637823 CD209Q9NNX6 404 aa14.15□□□□□ -0.14
CLN6-223ENST00000637823 PIM2Q9P1W9 311 aa14.15□□□□□ -0.14
CLN6-223ENST00000637823 CCDC171Q6TFL3 1326 aa14.15□□□□□ -0.15
CLN6-223ENST00000637823 COL1A1P02452 1464 aaPredicted RBP14.14□□□□□ -0.15
CLN6-223ENST00000637823 CHGBP05060 677 aa14.14□□□□□ -0.15
CLN6-223ENST00000637823 PTGER2P43116 358 aa14.14□□□□□ -0.15
CLN6-223ENST00000637823 PTH1RQ03431 593 aa14.14□□□□□ -0.15
CLN6-223ENST00000637823 ZGPATQ8N5A5 531 aaKnown RBP14.14□□□□□ -0.15
CLN6-223ENST00000637823 SUPT20HQ8NEM7 779 aa14.14□□□□□ -0.15
CLN6-223ENST00000637823 MAP4K1Q92918 833 aa14.14□□□□□ -0.15
CLN6-223ENST00000637823 DDRGK1Q96HY6 314 aa14.14□□□□□ -0.15
CLN6-223ENST00000637823 SEC62Q99442 399 aaKnown RBP14.14□□□□□ -0.15
CLN6-223ENST00000637823 COA1Q9GZY4 146 aa14.14□□□□□ -0.15
CLN6-223ENST00000637823 ZNF532Q9HCE3 1301 aa14.14□□□□□ -0.15
CLN6-223ENST00000637823 SALL1Q9NSC2 1324 aa14.14□□□□□ -0.15
CLN6-223ENST00000637823 TCRBV5S4A2TA0A5A2 114 aa14.13□□□□□ -0.15
CLN6-223ENST00000637823 C21orf2O43822 256 aa14.13□□□□□ -0.15
CLN6-223ENST00000637823 HSPA4P34932 840 aa14.13□□□□□ -0.15
CLN6-223ENST00000637823 ANAPC15P60006 121 aa14.13□□□□□ -0.15
CLN6-223ENST00000637823 CHAF1AQ13111 956 aaPredicted RBP14.13□□□□□ -0.15
CLN6-223ENST00000637823 SLFNL1Q499Z3 407 aa14.13□□□□□ -0.15
CLN6-223ENST00000637823 SOGA3Q5TF21 947 aa14.13□□□□□ -0.15
CLN6-223ENST00000637823 ERICH6Q7L0X2 663 aa14.13□□□□□ -0.15
CLN6-223ENST00000637823 ZNF589Q86UQ0 364 aaPredicted RBP14.13□□□□□ -0.15
CLN6-223ENST00000637823 RTKN2Q8IZC4 609 aa14.13□□□□□ -0.15
CLN6-223ENST00000637823 OSBP2Q969R2 916 aa14.13□□□□□ -0.15
CLN6-223ENST00000637823 KIF2CQ99661 725 aa14.13□□□□□ -0.15
CLN6-223ENST00000637823 ZNF219Q9P2Y4 722 aaPredicted RBP14.13□□□□□ -0.15
CLN6-223ENST00000637823 ABCF2Q9UG63 623 aa14.13□□□□□ -0.15
CLN6-223ENST00000637823 WWC3Q9ULE0 1092 aa14.13□□□□□ -0.15
CLN6-223ENST00000637823 MAST3O60307 1309 aa14.13□□□□□ -0.15
CLN6-223ENST00000637823 M0R2C6 588 aa14.12□□□□□ -0.15
CLN6-223ENST00000637823 RIMBP2O15034 1052 aa14.12□□□□□ -0.15
CLN6-223ENST00000637823 CCDC129Q6ZRS4 1044 aa14.12□□□□□ -0.15
CLN6-223ENST00000637823 MAGEB6Q8N7X4 407 aa14.12□□□□□ -0.15
CLN6-223ENST00000637823 IL17RAQ96F46 866 aa14.12□□□□□ -0.15
CLN6-223ENST00000637823 DSCC1Q9BVC3 393 aa14.12□□□□□ -0.15
CLN6-223ENST00000637823 SPON1Q9HCB6 807 aa14.12□□□□□ -0.15
CLN6-223ENST00000637823 RAI14Q9P0K7 980 aa14.12□□□□□ -0.15
CLN6-223ENST00000637823 MAST2Q6P0Q8 1798 aa14.11□□□□□ -0.15
CLN6-223ENST00000637823 G3V3G9 751 aa14.11□□□□□ -0.15
CLN6-223ENST00000637823 NECTIN1Q15223 517 aa14.11□□□□□ -0.15
CLN6-223ENST00000637823 CCDC93Q567U6 631 aa14.11□□□□□ -0.15
CLN6-223ENST00000637823 DALRD3Q5D0E6 543 aaKnown RBP14.11□□□□□ -0.15
CLN6-223ENST00000637823 DCAF8Q5TAQ9 597 aa14.11□□□□□ -0.15
CLN6-223ENST00000637823 SNED1Q8TER0 1413 aa14.11□□□□□ -0.15
CLN6-223ENST00000637823 KCNB2Q92953 911 aa14.11□□□□□ -0.15
CLN6-223ENST00000637823 IPO9Q96P70 1041 aaKnown RBP14.11□□□□□ -0.15
CLN6-223ENST00000637823 PUS7LQ9H0K6 701 aaKnown RBP14.11□□□□□ -0.15
CLN6-223ENST00000637823 RBM8AQ9Y5S9 174 aaKnown RBP14.11□□□□□ -0.15
CLN6-223ENST00000637823 U3KPZ7 1027 aaPredicted RBP14.11□□□□□ -0.15
CLN6-223ENST00000637823 MYH2Q9UKX2 1941 aa14.11□□□□□ -0.15
CLN6-223ENST00000637823 FAM205AQ6ZU69 1335 aa14.11□□□□□ -0.15
CLN6-223ENST00000637823 CYP7A1P22680 504 aa14.1□□□□□ -0.15
CLN6-223ENST00000637823 RABEP1Q15276 862 aa14.1□□□□□ -0.15
CLN6-223ENST00000637823 PODNQ7Z5L7 613 aa14.1□□□□□ -0.15
CLN6-223ENST00000637823 IL27Q8NEV9 243 aa14.1□□□□□ -0.15
CLN6-223ENST00000637823 TBC1D22AQ8WUA7 517 aa14.1□□□□□ -0.15
CLN6-223ENST00000637823 PSMD1Q99460 953 aa14.1□□□□□ -0.15
CLN6-223ENST00000637823 VPS33BQ9H267 617 aa14.1□□□□□ -0.15
CLN6-223ENST00000637823 PPP1R1BQ9UD71 204 aaPredicted RBP14.1□□□□□ -0.15
CLN6-223ENST00000637823 GPAA1O43292 621 aa14.09□□□□□ -0.15
CLN6-223ENST00000637823 LDHBP07195 334 aaKnown RBP14.09□□□□□ -0.15
CLN6-223ENST00000637823 HSPD1P10809 573 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms