RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 TRERF1Q96PN7 1200 aa20.27■□□□□ 0.83
CACNA1A-247ENST00000637769 CCDC152Q4G0S7 254 aa20.27■□□□□ 0.83
CACNA1A-247ENST00000637769 KIFC2Q96AC6 838 aa20.27■□□□□ 0.83
CACNA1A-247ENST00000637769 HSPA1LP34931 641 aa20.26■□□□□ 0.83
CACNA1A-247ENST00000637769 RUFY4Q6ZNE9 571 aa20.26■□□□□ 0.83
CACNA1A-247ENST00000637769 TMX1Q9H3N1 280 aa20.26■□□□□ 0.83
CACNA1A-247ENST00000637769 CA8P35219 290 aa20.26■□□□□ 0.83
CACNA1A-247ENST00000637769 UBXN1Q04323 297 aa20.26■□□□□ 0.83
CACNA1A-247ENST00000637769 OGFOD1Q8N543 542 aa20.26■□□□□ 0.83
CACNA1A-247ENST00000637769 VPS18Q9P253 973 aa20.26■□□□□ 0.83
CACNA1A-247ENST00000637769 AGTPBP1Q9UPW5 1226 aa20.26■□□□□ 0.83
CACNA1A-247ENST00000637769 MYD88Q99836 296 aa20.26■□□□□ 0.83
CACNA1A-247ENST00000637769 BRAPQ7Z569 592 aa20.26■□□□□ 0.83
CACNA1A-247ENST00000637769 RBM26Q5T8P6 1007 aaKnown RBP20.26■□□□□ 0.83
CACNA1A-247ENST00000637769 ZHX1Q9UKY1 873 aaPredicted RBP20.26■□□□□ 0.83
CACNA1A-247ENST00000637769 GOLGA4Q13439 2230 aaKnown RBP20.26■□□□□ 0.83
CACNA1A-247ENST00000637769 MUM1L1Q5H9M0 696 aa20.26■□□□□ 0.83
CACNA1A-247ENST00000637769 GKAP1Q5VSY0 366 aaPredicted RBP20.25■□□□□ 0.83
CACNA1A-247ENST00000637769 SEPT14Q6ZU15 432 aa20.25■□□□□ 0.83
CACNA1A-247ENST00000637769 RFC1P35251 1148 aaPredicted RBP20.25■□□□□ 0.83
CACNA1A-247ENST00000637769 TCHPQ9BT92 498 aa20.25■□□□□ 0.83
CACNA1A-247ENST00000637769 CCDC125Q86Z20 511 aa20.25■□□□□ 0.83
CACNA1A-247ENST00000637769 IFT20Q8IY31 132 aa20.25■□□□□ 0.83
CACNA1A-247ENST00000637769 UBLCP1Q8WVY7 318 aaPredicted RBP20.25■□□□□ 0.83
CACNA1A-247ENST00000637769 BUB1BO60566 1050 aaPredicted RBP20.24■□□□□ 0.83
CACNA1A-247ENST00000637769 MMRN2Q9H8L6 949 aa20.24■□□□□ 0.83
CACNA1A-247ENST00000637769 GSDMBQ8TAX9 411 aa20.24■□□□□ 0.83
CACNA1A-247ENST00000637769 GLT8D2Q9H1C3 349 aa20.24■□□□□ 0.83
CACNA1A-247ENST00000637769 TRIM75PA6NK02 468 aa20.24■□□□□ 0.83
CACNA1A-247ENST00000637769 SMTNP53814 917 aa20.24■□□□□ 0.83
CACNA1A-247ENST00000637769 NBPF8Q3BBV2 869 aa20.24■□□□□ 0.83
CACNA1A-247ENST00000637769 PRR16Q569H4 304 aa20.24■□□□□ 0.83
CACNA1A-247ENST00000637769 HCLS1P14317 486 aaPredicted RBP20.24■□□□□ 0.83
CACNA1A-247ENST00000637769 WDR44Q5JSH3 913 aa20.24■□□□□ 0.83
CACNA1A-247ENST00000637769 GOLGA6CA6NDK9 693 aa20.24■□□□□ 0.83
CACNA1A-247ENST00000637769 GOLGA6BA6NDN3 693 aa20.24■□□□□ 0.83
CACNA1A-247ENST00000637769 GOLGA6DP0CG33 693 aa20.24■□□□□ 0.83
CACNA1A-247ENST00000637769 CLCN1P35523 988 aa20.24■□□□□ 0.83
CACNA1A-247ENST00000637769 CCDC85AQ96PX6 553 aaPredicted RBP20.24■□□□□ 0.83
CACNA1A-247ENST00000637769 GOLGA6AQ9NYA3 693 aa20.24■□□□□ 0.83
CACNA1A-247ENST00000637769 NUTM2AQ8IVF1 878 aaPredicted RBP20.23■□□□□ 0.83
CACNA1A-247ENST00000637769 CCDC89Q8N998 374 aa20.23■□□□□ 0.83
CACNA1A-247ENST00000637769 RAD50Q92878 1312 aa20.23■□□□□ 0.83
CACNA1A-247ENST00000637769 DNAJC8O75937 253 aaPredicted RBP20.23■□□□□ 0.83
CACNA1A-247ENST00000637769 CCDC25Q86WR0 208 aa20.23■□□□□ 0.83
CACNA1A-247ENST00000637769 ALG1Q9BT22 464 aa20.23■□□□□ 0.83
CACNA1A-247ENST00000637769 TBC1D9Q6ZT07 1266 aa20.23■□□□□ 0.83
CACNA1A-247ENST00000637769 CDAN1Q8IWY9 1227 aa20.23■□□□□ 0.83
CACNA1A-247ENST00000637769 CCDC38Q502W7 563 aa20.23■□□□□ 0.83
CACNA1A-247ENST00000637769 CCDC170Q8IYT3 715 aa20.23■□□□□ 0.83
CACNA1A-247ENST00000637769 TBC1D2Q9BYX2 928 aa20.23■□□□□ 0.83
CACNA1A-247ENST00000637769 C6orf229H3BNL8 230 aa20.23■□□□□ 0.83
CACNA1A-247ENST00000637769 RARSP54136 660 aaKnown RBP20.23■□□□□ 0.83
CACNA1A-247ENST00000637769 RRS1Q15050 365 aaKnown RBP20.23■□□□□ 0.83
CACNA1A-247ENST00000637769 AFAP1L1Q8TED9 768 aa20.23■□□□□ 0.83
CACNA1A-247ENST00000637769 EPB41P11171 864 aaKnown RBP20.22■□□□□ 0.83
CACNA1A-247ENST00000637769 PAXIP1Q6ZW49 1069 aaPredicted RBP20.22■□□□□ 0.83
CACNA1A-247ENST00000637769 RRP36Q96EU6 259 aaKnown RBP20.22■□□□□ 0.83
CACNA1A-247ENST00000637769 SSFA2P28290 1259 aa20.22■□□□□ 0.83
CACNA1A-247ENST00000637769 KRT79Q5XKE5 535 aa20.22■□□□□ 0.83
CACNA1A-247ENST00000637769 OGFRQ9NZT2 677 aa20.22■□□□□ 0.83
CACNA1A-247ENST00000637769 SEPT10Q9P0V9 454 aa20.22■□□□□ 0.83
CACNA1A-247ENST00000637769 KRT2P35908 639 aa20.22■□□□□ 0.83
CACNA1A-247ENST00000637769 IQCDQ96DY2 449 aa20.22■□□□□ 0.83
CACNA1A-247ENST00000637769 IL16Q14005 1332 aa20.22■□□□□ 0.83
CACNA1A-247ENST00000637769 TERF1P54274 439 aa20.22■□□□□ 0.83
CACNA1A-247ENST00000637769 LIN9Q5TKA1 542 aa20.22■□□□□ 0.83
CACNA1A-247ENST00000637769 RBM28Q9NW13 759 aaKnown RBP20.22■□□□□ 0.83
CACNA1A-247ENST00000637769 FAM204AQ9H8W3 233 aa20.21■□□□□ 0.83
CACNA1A-247ENST00000637769 PTGS1P23219 599 aa20.21■□□□□ 0.83
CACNA1A-247ENST00000637769 CCDC65Q8IXS2 484 aa20.21■□□□□ 0.83
CACNA1A-247ENST00000637769 SMARCC2Q8TAQ2 1214 aa20.21■□□□□ 0.83
CACNA1A-247ENST00000637769 NOX5Q96PH1 765 aa20.21■□□□□ 0.83
CACNA1A-247ENST00000637769 NAPAP54920 295 aa20.21■□□□□ 0.83
CACNA1A-247ENST00000637769 SSH1Q8WYL5 1049 aa20.21■□□□□ 0.83
CACNA1A-247ENST00000637769 MYH10P35580 1976 aa20.21■□□□□ 0.83
CACNA1A-247ENST00000637769 IFT81Q8WYA0 676 aa20.21■□□□□ 0.83
CACNA1A-247ENST00000637769 Q9H521 79 aa20.21■□□□□ 0.83
CACNA1A-247ENST00000637769 NUTM2BA6NNL0 878 aaPredicted RBP20.21■□□□□ 0.83
CACNA1A-247ENST00000637769 NUTM2EB1AL46 878 aaPredicted RBP20.21■□□□□ 0.83
CACNA1A-247ENST00000637769 AFMP43652 599 aa20.21■□□□□ 0.83
CACNA1A-247ENST00000637769 LDHAL6AQ6ZMR3 332 aa20.21■□□□□ 0.83
CACNA1A-247ENST00000637769 PPP2R5EQ16537 467 aa20.2■□□□□ 0.83
CACNA1A-247ENST00000637769 VAT1LQ9HCJ6 419 aa20.2■□□□□ 0.83
CACNA1A-247ENST00000637769 HEATR3Q7Z4Q2 680 aa20.2■□□□□ 0.82
CACNA1A-247ENST00000637769 CERS3Q8IU89 383 aa20.2■□□□□ 0.82
CACNA1A-247ENST00000637769 TSKSQ9UJT2 592 aa20.2■□□□□ 0.82
CACNA1A-247ENST00000637769 RAD54L2Q9Y4B4 1467 aa20.2■□□□□ 0.82
CACNA1A-247ENST00000637769 DTHD1Q6ZMT9 781 aa20.2■□□□□ 0.82
CACNA1A-247ENST00000637769 RNF10Q8N5U6 811 aaKnown RBP20.2■□□□□ 0.82
CACNA1A-247ENST00000637769 IQUBQ8NA54 791 aa20.2■□□□□ 0.82
CACNA1A-247ENST00000637769 ZNF830Q96NB3 372 aaPredicted RBP20.19■□□□□ 0.82
CACNA1A-247ENST00000637769 TFIP11Q9UBB9 837 aaKnown RBP20.19■□□□□ 0.82
CACNA1A-247ENST00000637769 FLIIQ13045 1269 aa20.19■□□□□ 0.82
CACNA1A-247ENST00000637769 SYCE1Q8N0S2 351 aa20.19■□□□□ 0.82
CACNA1A-247ENST00000637769 PARP2Q9UGN5 583 aa20.19■□□□□ 0.82
CACNA1A-247ENST00000637769 ZKSCAN5Q9Y2L8 839 aa20.19■□□□□ 0.82
CACNA1A-247ENST00000637769 FAN1Q9Y2M0 1017 aa20.19■□□□□ 0.82
CACNA1A-247ENST00000637769 PTCD1O75127 700 aaKnown RBP20.19■□□□□ 0.82
CACNA1A-247ENST00000637769 ZNF365Q70YC5 407 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms