RNA–Protein interactions for RNA: ENST00000637490.1

SYNGAP1-221, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 132 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-221ENST00000637490 NEK1Q96PY6 1258 aa2.94□□□□□ -1.94
SYNGAP1-221ENST00000637490 OSBPL9Q96SU4 736 aa2.94□□□□□ -1.94
SYNGAP1-221ENST00000637490 TANGO6Q9C0B7 1094 aa2.94□□□□□ -1.94
SYNGAP1-221ENST00000637490 SLC7A5P2Q9GIP4 190 aa2.94□□□□□ -1.94
SYNGAP1-221ENST00000637490 ZSCAN16Q9H4T2 348 aaPredicted RBP2.94□□□□□ -1.94
SYNGAP1-221ENST00000637490 TCF7L2Q9NQB0 619 aa2.94□□□□□ -1.94
SYNGAP1-221ENST00000637490 IL20Q9NYY1 176 aa2.94□□□□□ -1.94
SYNGAP1-221ENST00000637490 UBAP1Q9NZ09 502 aa2.94□□□□□ -1.94
SYNGAP1-221ENST00000637490 ANKIB1Q9P2G1 1089 aa2.94□□□□□ -1.94
SYNGAP1-221ENST00000637490 MKRN1Q9UHC7 482 aaKnown RBP2.94□□□□□ -1.94
SYNGAP1-221ENST00000637490 IP6K2Q9UHH9 426 aa2.94□□□□□ -1.94
SYNGAP1-221ENST00000637490 POLG2Q9UHN1 485 aa2.94□□□□□ -1.94
SYNGAP1-221ENST00000637490 ASAP1Q9ULH1 1129 aa2.94□□□□□ -1.94
SYNGAP1-221ENST00000637490 PRR12Q9ULL5 1215 aa2.94□□□□□ -1.94
SYNGAP1-221ENST00000637490 SSX2IPQ9Y2D8 614 aa2.94□□□□□ -1.94
SYNGAP1-221ENST00000637490 NOSIPQ9Y314 301 aaKnown RBP2.94□□□□□ -1.94
SYNGAP1-221ENST00000637490 TMED5Q9Y3A6 229 aa2.94□□□□□ -1.94
SYNGAP1-221ENST00000637490 TTLL3Q9Y4R7 772 aa2.94□□□□□ -1.94
SYNGAP1-221ENST00000637490 KTN1Q86UP2 1357 aaKnown RBP2.94□□□□□ -1.94
SYNGAP1-221ENST00000637490 ZMYM3Q14202 1370 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 RPAP1Q9BWH6 1393 aaPredicted RBP2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 TMEM238LA0A1B0GVL6 79 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 GTPBP10A4D1E9 387 aaKnown RBP2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 EIF3CLB5ME19 914 aaKnown RBP2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 EIF3FO00303 357 aaPredicted RBP2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 KIF3BO15066 747 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 PER1O15534 1290 aaPredicted RBP2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 ONECUT3O60422 494 aaPredicted RBP2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 DIAPH1O60610 1272 aaKnown RBP2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 DIAPH2O60879 1101 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 PRPF40AO75400 957 aaKnown RBP2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 ZMYND10O75800 440 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 ZNF189O75820 626 aaPredicted RBP2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 PYGLP06737 847 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 FESP07332 822 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 ATXN8OSP0DMR3 200 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 HSPA1AP0DMV8 641 aaKnown RBP2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 HSPA1BP0DMV9 641 aaKnown RBP2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 SKIP12755 728 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 DESP17661 470 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 MCM3P25205 808 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 S100A5P33763 92 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 GCLCP48506 637 aaPredicted RBP2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 TNNI2P48788 182 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 NUCB1Q02818 461 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 NCBP1Q09161 790 aaKnown RBP2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 MYBPC3Q14896 1274 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 RASA2Q15283 850 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 LONRF1Q17RB8 773 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 PLEKHG6Q3KR16 790 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 Q4G0T1 1027 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 CCDC38Q502W7 563 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 CCDC93Q567U6 631 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 CFAP58Q5T655 872 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 EMC10Q5UCC4 262 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 TTC39BQ5VTQ0 682 aaPredicted RBP2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 NUGGCQ68CJ6 796 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 SDE2Q6IQ49 451 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 OLFML1Q6UWY5 402 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 CCBE1Q6UXH8 406 aaPredicted RBP2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 ATF7IPQ6VMQ6 1270 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 CLEC17AQ6ZS10 378 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 TADA2BQ86TJ2 420 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 C11orf74Q86VG3 221 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 PROSER2Q86WR7 435 aaPredicted RBP2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 KIAA0825Q8IV33 1275 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 CHPFQ8IZ52 775 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 PRPF38AQ8NAV1 312 aaKnown RBP2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 NFATC2IPQ8NCF5 419 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 MSANTD4Q8NCY6 345 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 RASSF8Q8NHQ8 419 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 SUN5Q8TC36 379 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 JARID2Q92833 1246 aaPredicted RBP2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 ERP27Q96DN0 273 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 EPSTI1Q96J88 318 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 MAML3Q96JK9 1138 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 ZMAT2Q96NC0 199 aaKnown RBP2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 SPAG5Q96R06 1193 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 EIF3CQ99613 913 aaKnown RBP2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 OSBPL10Q9BXB5 764 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 TRIM4Q9C037 500 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 XPO4Q9C0E2 1151 aaKnown RBP2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 BRD8Q9H0E9 1235 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 TNMDQ9H2S6 317 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 MRPL46Q9H2W6 279 aaKnown RBP2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 SYNCQ9H7C4 482 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 AS3MTQ9HBK9 375 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 KRT82Q9NSB4 513 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 ARGLU1Q9NWB6 273 aaPredicted RBP2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 HDAC6Q9UBN7 1215 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 BIN2Q9UBW5 565 aaPredicted RBP2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 DDX25Q9UHL0 483 aaKnown RBP2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 CROTQ9UKG9 612 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 COG6Q9Y2V7 657 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 SLC45A1Q9Y2W3 748 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 GMEB1Q9Y692 573 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 IVNS1ABPQ9Y6Y0 642 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 MIA2Q96PC5 1412 aa2.93□□□□□ -1.94
SYNGAP1-221ENST00000637490 RRBP1Q9P2E9 1410 aaKnown RBP2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms