RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 RFX7Q2KHR2 1363 aa16.21■□□□□ 0.19
LINC00643-207ENST00000637212 ZGPATQ8N5A5 531 aaKnown RBP16.2■□□□□ 0.18
LINC00643-207ENST00000637212 EDC3Q96F86 508 aaKnown RBP16.2■□□□□ 0.18
LINC00643-207ENST00000637212 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.2■□□□□ 0.18
LINC00643-207ENST00000637212 ANTXR1Q9H6X2 564 aa16.2■□□□□ 0.18
LINC00643-207ENST00000637212 FAM205AQ6ZU69 1335 aa16.19■□□□□ 0.18
LINC00643-207ENST00000637212 SALL1Q9NSC2 1324 aa16.19■□□□□ 0.18
LINC00643-207ENST00000637212 RNF113AO15541 343 aaKnown RBP16.19■□□□□ 0.18
LINC00643-207ENST00000637212 MAP3K12Q12852 859 aa16.19■□□□□ 0.18
LINC00643-207ENST00000637212 SPTY2D1Q68D10 685 aaPredicted RBP16.19■□□□□ 0.18
LINC00643-207ENST00000637212 PI16Q6UXB8 463 aa16.19■□□□□ 0.18
LINC00643-207ENST00000637212 PIH1D3Q9NQM4 214 aaKnown RBP16.19■□□□□ 0.18
LINC00643-207ENST00000637212 DIAPH3Q9NSV4 1193 aa16.19■□□□□ 0.18
LINC00643-207ENST00000637212 NDUFB9Q9Y6M9 179 aa16.19■□□□□ 0.18
LINC00643-207ENST00000637212 LRRC37AA6NMS7 1700 aa16.19■□□□□ 0.18
LINC00643-207ENST00000637212 LTBP3Q9NS15 1303 aa16.19■□□□□ 0.18
LINC00643-207ENST00000637212 SLX4Q8IY92 1834 aa16.18■□□□□ 0.18
LINC00643-207ENST00000637212 DCAF8L1A6NGE4 600 aa16.18■□□□□ 0.18
LINC00643-207ENST00000637212 TBC1D22AQ8WUA7 517 aa16.18■□□□□ 0.18
LINC00643-207ENST00000637212 IQSEC3Q9UPP2 1182 aaPredicted RBP16.18■□□□□ 0.18
LINC00643-207ENST00000637212 PPIP5K2O43314 1243 aa16.17■□□□□ 0.18
LINC00643-207ENST00000637212 UBE3CQ15386 1083 aa16.17■□□□□ 0.18
LINC00643-207ENST00000637212 DOK7Q18PE1 504 aa16.17■□□□□ 0.18
LINC00643-207ENST00000637212 ESYT1Q9BSJ8 1104 aa16.17■□□□□ 0.18
LINC00643-207ENST00000637212 TAOK3Q9H2K8 898 aa16.17■□□□□ 0.18
LINC00643-207ENST00000637212 HELLSQ9NRZ9 838 aa16.17■□□□□ 0.18
LINC00643-207ENST00000637212 LRP2BPQ9P2M1 347 aa16.17■□□□□ 0.18
LINC00643-207ENST00000637212 FKBP1AP62942 108 aaKnown RBP16.16■□□□□ 0.18
LINC00643-207ENST00000637212 AOC3Q16853 763 aa16.16■□□□□ 0.18
LINC00643-207ENST00000637212 ERICH6Q7L0X2 663 aa16.16■□□□□ 0.18
LINC00643-207ENST00000637212 SUGT1Q9Y2Z0 365 aa16.16■□□□□ 0.18
LINC00643-207ENST00000637212 DLEC1Q9Y238 1755 aa16.15■□□□□ 0.18
LINC00643-207ENST00000637212 SPEF2Q9C093 1822 aa16.15■□□□□ 0.18
LINC00643-207ENST00000637212 EPB41L2O43491 1005 aaKnown RBP16.15■□□□□ 0.18
LINC00643-207ENST00000637212 IDH1O75874 414 aaKnown RBP16.15■□□□□ 0.18
LINC00643-207ENST00000637212 YY1P25490 414 aa16.15■□□□□ 0.18
LINC00643-207ENST00000637212 ADD2P35612 726 aa16.15■□□□□ 0.18
LINC00643-207ENST00000637212 IARSP41252 1262 aaKnown RBP16.15■□□□□ 0.18
LINC00643-207ENST00000637212 CHAF1AQ13111 956 aaPredicted RBP16.15■□□□□ 0.18
LINC00643-207ENST00000637212 MCMDC2Q4G0Z9 681 aa16.15■□□□□ 0.18
LINC00643-207ENST00000637212 ZMYM1Q5SVZ6 1142 aa16.15■□□□□ 0.18
LINC00643-207ENST00000637212 SLC9C2Q5TAH2 1124 aa16.15■□□□□ 0.18
LINC00643-207ENST00000637212 STRIP1Q5VSL9 837 aa16.15■□□□□ 0.18
LINC00643-207ENST00000637212 TTLL5Q6EMB2 1281 aa16.15■□□□□ 0.18
LINC00643-207ENST00000637212 LARGE2Q8N3Y3 721 aa16.15■□□□□ 0.18
LINC00643-207ENST00000637212 DUOX1Q9NRD9 1551 aa16.15■□□□□ 0.18
LINC00643-207ENST00000637212 ZNF277Q9NRM2 450 aaPredicted RBP16.15■□□□□ 0.18
LINC00643-207ENST00000637212 ABCF2Q9UG63 623 aa16.15■□□□□ 0.18
LINC00643-207ENST00000637212 LTBP1Q14766 1721 aa16.14■□□□□ 0.17
LINC00643-207ENST00000637212 ARAP2Q8WZ64 1704 aa16.14■□□□□ 0.17
LINC00643-207ENST00000637212 KIAA1551Q9HCM1 1747 aa16.14■□□□□ 0.17
LINC00643-207ENST00000637212 NFKBIEO00221 500 aa16.14■□□□□ 0.17
LINC00643-207ENST00000637212 SGSM2O43147 1006 aa16.14■□□□□ 0.17
LINC00643-207ENST00000637212 ECE2O60344 883 aa16.14■□□□□ 0.17
LINC00643-207ENST00000637212 REC8O95072 547 aa16.14■□□□□ 0.17
LINC00643-207ENST00000637212 GTF2IP78347 998 aa16.14■□□□□ 0.17
LINC00643-207ENST00000637212 CWC27Q6UX04 472 aaKnown RBP16.14■□□□□ 0.17
LINC00643-207ENST00000637212 RAD50Q92878 1312 aa16.14■□□□□ 0.17
LINC00643-207ENST00000637212 TCRBV5S4A2TA0A5A2 114 aa16.13■□□□□ 0.17
LINC00643-207ENST00000637212 USP17L3A6NCW0 530 aa16.13■□□□□ 0.17
LINC00643-207ENST00000637212 USP17L4A6NCW7 530 aa16.13■□□□□ 0.17
LINC00643-207ENST00000637212 LDHBP07195 334 aaKnown RBP16.13■□□□□ 0.17
LINC00643-207ENST00000637212 PDE6AP16499 860 aa16.13■□□□□ 0.17
LINC00643-207ENST00000637212 MFAP1P55081 439 aaKnown RBP16.13■□□□□ 0.17
LINC00643-207ENST00000637212 NMIQ13287 307 aaPredicted RBP16.13■□□□□ 0.17
LINC00643-207ENST00000637212 USP17L1Q7RTZ2 530 aa16.13■□□□□ 0.17
LINC00643-207ENST00000637212 APPBP2Q92624 585 aa16.13■□□□□ 0.17
LINC00643-207ENST00000637212 DBNDD1Q9H9R9 158 aa16.13■□□□□ 0.17
LINC00643-207ENST00000637212 UPF2Q9HAU5 1272 aaKnown RBP16.13■□□□□ 0.17
LINC00643-207ENST00000637212 RAI14Q9P0K7 980 aa16.13■□□□□ 0.17
LINC00643-207ENST00000637212 WWC3Q9ULE0 1092 aa16.13■□□□□ 0.17
LINC00643-207ENST00000637212 ZNRF3Q9ULT6 936 aa16.13■□□□□ 0.17
LINC00643-207ENST00000637212 CHD4Q14839 1912 aa16.12■□□□□ 0.17
LINC00643-207ENST00000637212 SEC24BO95487 1268 aa16.12■□□□□ 0.17
LINC00643-207ENST00000637212 GSTO1P78417 241 aa16.12■□□□□ 0.17
LINC00643-207ENST00000637212 KIAA1211Q6ZU35 1233 aa16.12■□□□□ 0.17
LINC00643-207ENST00000637212 ARHGAP27Q6ZUM4 889 aa16.12■□□□□ 0.17
LINC00643-207ENST00000637212 NIM1KQ8IY84 436 aa16.12■□□□□ 0.17
LINC00643-207ENST00000637212 JDP2Q8WYK2 163 aa16.12■□□□□ 0.17
LINC00643-207ENST00000637212 FAM227BQ96M60 508 aa16.12■□□□□ 0.17
LINC00643-207ENST00000637212 MRIQ9BWK5 157 aa16.12■□□□□ 0.17
LINC00643-207ENST00000637212 COL1A1P02452 1464 aaPredicted RBP16.11■□□□□ 0.17
LINC00643-207ENST00000637212 A0A1B0GUL6 1792 aa16.11■□□□□ 0.17
LINC00643-207ENST00000637212 LDHCP07864 332 aa16.11■□□□□ 0.17
LINC00643-207ENST00000637212 MFSD14BQ5SR56 506 aa16.11■□□□□ 0.17
LINC00643-207ENST00000637212 SLF2Q8IX21 1173 aa16.11■□□□□ 0.17
LINC00643-207ENST00000637212 MAGEB6Q8N7X4 407 aa16.11■□□□□ 0.17
LINC00643-207ENST00000637212 NSUN4Q96CB9 384 aaKnown RBP16.11■□□□□ 0.17
LINC00643-207ENST00000637212 ZNF532Q9HCE3 1301 aa16.11■□□□□ 0.17
LINC00643-207ENST00000637212 A0A0D9SFI3 127 aa16.1■□□□□ 0.17
LINC00643-207ENST00000637212 CYP7A1P22680 504 aa16.1■□□□□ 0.17
LINC00643-207ENST00000637212 MECOMQ03112 1051 aa16.1■□□□□ 0.17
LINC00643-207ENST00000637212 DACT2Q5SW24 774 aa16.1■□□□□ 0.17
LINC00643-207ENST00000637212 NAA16Q6N069 864 aaPredicted RBP16.1■□□□□ 0.17
LINC00643-207ENST00000637212 OSBP2Q969R2 916 aa16.1■□□□□ 0.17
LINC00643-207ENST00000637212 FAM163AQ96GL9 167 aaPredicted RBP16.1■□□□□ 0.17
LINC00643-207ENST00000637212 USP26Q9BXU7 913 aa16.1■□□□□ 0.17
LINC00643-207ENST00000637212 YDJCA8MPS7 323 aa16.09■□□□□ 0.17
LINC00643-207ENST00000637212 VIL1P09327 827 aaKnown RBP16.09■□□□□ 0.17
LINC00643-207ENST00000637212 PRDX5P30044 214 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms