RNA–Protein interactions for RNA: ENST00000637194.1

SYNGAP1-220, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-220ENST00000637194 COL17A1Q9UMD9 1497 aaPredicted RBP3.16□□□□□ -1.9
SYNGAP1-220ENST00000637194 HMX2A2RU54 273 aa3.15□□□□□ -1.91
SYNGAP1-220ENST00000637194 A6NHS1 94 aa3.15□□□□□ -1.91
SYNGAP1-220ENST00000637194 PRR19A6NJB7 356 aa3.15□□□□□ -1.91
SYNGAP1-220ENST00000637194 ARID3CA6NKF2 412 aa3.15□□□□□ -1.91
SYNGAP1-220ENST00000637194 SOX1O00570 391 aaPredicted RBP3.15□□□□□ -1.91
SYNGAP1-220ENST00000637194 EREGO14944 169 aa3.15□□□□□ -1.91
SYNGAP1-220ENST00000637194 FZD6O60353 706 aa3.15□□□□□ -1.91
SYNGAP1-220ENST00000637194 PHACTR2O75167 634 aa3.15□□□□□ -1.91
SYNGAP1-220ENST00000637194 BMP3P12645 472 aa3.15□□□□□ -1.91
SYNGAP1-220ENST00000637194 PREPP48147 710 aa3.15□□□□□ -1.91
SYNGAP1-220ENST00000637194 NLRP12P59046 1061 aa3.15□□□□□ -1.91
SYNGAP1-220ENST00000637194 FKBP4Q02790 459 aaKnown RBP eCLIP3.15□□□□□ -1.91
SYNGAP1-220ENST00000637194 IKBKEQ14164 716 aa3.15□□□□□ -1.91
SYNGAP1-220ENST00000637194 CPSF6Q16630 551 aaKnown RBP eCLIP3.15□□□□□ -1.91
SYNGAP1-220ENST00000637194 FDX2Q6P4F2 183 aa3.15□□□□□ -1.91
SYNGAP1-220ENST00000637194 BEND4Q6ZU67 534 aa3.15□□□□□ -1.91
SYNGAP1-220ENST00000637194 VN1R5Q7Z5H4 357 aa3.15□□□□□ -1.91
SYNGAP1-220ENST00000637194 GJD3Q8N144 294 aa3.15□□□□□ -1.91
SYNGAP1-220ENST00000637194 CCDC82Q8N4S0 544 aa3.15□□□□□ -1.91
SYNGAP1-220ENST00000637194 SMG8Q8ND04 991 aaKnown RBP3.15□□□□□ -1.91
SYNGAP1-220ENST00000637194 KRTAP4-12Q9BQ66 201 aa3.15□□□□□ -1.91
SYNGAP1-220ENST00000637194 TMPRSS13Q9BYE2 586 aa3.15□□□□□ -1.91
SYNGAP1-220ENST00000637194 AMOTL2Q9Y2J4 779 aa3.15□□□□□ -1.91
SYNGAP1-220ENST00000637194 LOC100289279A0A1B0GTE1 492 aa3.14□□□□□ -1.91
SYNGAP1-220ENST00000637194 TRPA1O75762 1119 aa3.14□□□□□ -1.91
SYNGAP1-220ENST00000637194 MED26O95402 600 aa3.14□□□□□ -1.91
SYNGAP1-220ENST00000637194 TIAF1O95411 115 aa3.14□□□□□ -1.91
SYNGAP1-220ENST00000637194 ESRRAP11474 423 aaPredicted RBP3.14□□□□□ -1.91
SYNGAP1-220ENST00000637194 MTMR3Q13615 1198 aa3.14□□□□□ -1.91
SYNGAP1-220ENST00000637194 AAMPQ13685 434 aa3.14□□□□□ -1.91
SYNGAP1-220ENST00000637194 NUTM2GQ5VZR2 741 aa3.14□□□□□ -1.91
SYNGAP1-220ENST00000637194 B4GALNT3Q6L9W6 998 aa3.14□□□□□ -1.91
SYNGAP1-220ENST00000637194 PHLDB3Q6NSJ2 640 aa3.14□□□□□ -1.91
SYNGAP1-220ENST00000637194 DTX1Q86Y01 620 aa3.14□□□□□ -1.91
SYNGAP1-220ENST00000637194 GIMAP7Q8NHV1 300 aa3.14□□□□□ -1.91
SYNGAP1-220ENST00000637194 SLC7A3Q8WY07 619 aa3.14□□□□□ -1.91
SYNGAP1-220ENST00000637194 HHIPQ96QV1 700 aa3.14□□□□□ -1.91
SYNGAP1-220ENST00000637194 CYP4F12Q9HCS2 524 aa3.14□□□□□ -1.91
SYNGAP1-220ENST00000637194 EGFL7Q9UHF1 273 aa3.14□□□□□ -1.91
SYNGAP1-220ENST00000637194 FOXD3Q9UJU5 478 aaPredicted RBP3.14□□□□□ -1.91
SYNGAP1-220ENST00000637194 GAS2O43903 313 aaKnown RBP3.13□□□□□ -1.91
SYNGAP1-220ENST00000637194 NEFLP07196 543 aa3.13□□□□□ -1.91
SYNGAP1-220ENST00000637194 MAP4P27816 1152 aaKnown RBP3.13□□□□□ -1.91
SYNGAP1-220ENST00000637194 IRAK1P51617 712 aa3.13□□□□□ -1.91
SYNGAP1-220ENST00000637194 GP2P55259 537 aaKnown RBP3.13□□□□□ -1.91
SYNGAP1-220ENST00000637194 EXOSC6Q5RKV6 272 aaKnown RBP3.13□□□□□ -1.91
SYNGAP1-220ENST00000637194 PEAR1Q5VY43 1037 aaPredicted RBP3.13□□□□□ -1.91
SYNGAP1-220ENST00000637194 HGSNATQ68CP4 663 aa3.13□□□□□ -1.91
SYNGAP1-220ENST00000637194 SHKBP1Q8TBC3 707 aa3.13□□□□□ -1.91
SYNGAP1-220ENST00000637194 KCNF1Q9H3M0 494 aa3.13□□□□□ -1.91
SYNGAP1-220ENST00000637194 ZFYVE1Q9HBF4 777 aa3.13□□□□□ -1.91
SYNGAP1-220ENST00000637194 ZFYVE28Q9HCC9 887 aa3.13□□□□□ -1.91
SYNGAP1-220ENST00000637194 USTQ9Y2C2 406 aa3.13□□□□□ -1.91
SYNGAP1-220ENST00000637194 GTF3C3Q9Y5Q9 886 aa3.13□□□□□ -1.91
SYNGAP1-220ENST00000637194 PAX4O43316 350 aa3.12□□□□□ -1.91
SYNGAP1-220ENST00000637194 ICMTO60725 284 aa3.12□□□□□ -1.91
SYNGAP1-220ENST00000637194 WNT11O96014 354 aa3.12□□□□□ -1.91
SYNGAP1-220ENST00000637194 SGO2Q562F6 1265 aa3.12□□□□□ -1.91
SYNGAP1-220ENST00000637194 HP1BP3Q5SSJ5 553 aaPredicted RBP3.12□□□□□ -1.91
SYNGAP1-220ENST00000637194 CCNJLQ8IV13 435 aa3.12□□□□□ -1.91
SYNGAP1-220ENST00000637194 GALNT12Q8IXK2 581 aa3.12□□□□□ -1.91
SYNGAP1-220ENST00000637194 C12orf50Q8NA57 414 aaPredicted RBP3.12□□□□□ -1.91
SYNGAP1-220ENST00000637194 ASAP3Q8TDY4 903 aa3.12□□□□□ -1.91
SYNGAP1-220ENST00000637194 FMNL2Q96PY5 1086 aa3.12□□□□□ -1.91
SYNGAP1-220ENST00000637194 METTL22Q9BUU2 404 aaPredicted RBP3.12□□□□□ -1.91
SYNGAP1-220ENST00000637194 YIPF2Q9BWQ6 316 aa3.12□□□□□ -1.91
SYNGAP1-220ENST00000637194 USP26Q9BXU7 913 aa3.12□□□□□ -1.91
SYNGAP1-220ENST00000637194 NRSN2Q9GZP1 204 aa3.12□□□□□ -1.91
SYNGAP1-220ENST00000637194 GOLGA2P5Q9HBQ8 144 aa3.12□□□□□ -1.91
SYNGAP1-220ENST00000637194 ATG3Q9NT62 314 aa3.12□□□□□ -1.91
SYNGAP1-220ENST00000637194 CCDC87Q9NVE4 849 aa3.12□□□□□ -1.91
SYNGAP1-220ENST00000637194 PIM2Q9P1W9 311 aa3.12□□□□□ -1.91
SYNGAP1-220ENST00000637194 OAS3Q9Y6K5 1087 aaKnown RBP3.12□□□□□ -1.91
SYNGAP1-220ENST00000637194 A0A096LPE4 126 aa3.11□□□□□ -1.91
SYNGAP1-220ENST00000637194 A0A1W2PP55 124 aa3.11□□□□□ -1.91
SYNGAP1-220ENST00000637194 A0A1W2PPZ6 126 aa3.11□□□□□ -1.91
SYNGAP1-220ENST00000637194 WDR64B1ANS9 1081 aa3.11□□□□□ -1.91
SYNGAP1-220ENST00000637194 DLGAP3O95886 979 aa3.11□□□□□ -1.91
SYNGAP1-220ENST00000637194 ABL1P00519 1130 aa3.11□□□□□ -1.91
SYNGAP1-220ENST00000637194 TXKP42681 527 aa3.11□□□□□ -1.91
SYNGAP1-220ENST00000637194 GSTM4Q03013 218 aa3.11□□□□□ -1.91
SYNGAP1-220ENST00000637194 PCDH1Q08174 1060 aa3.11□□□□□ -1.91
SYNGAP1-220ENST00000637194 LCE3BQ5TA77 95 aa3.11□□□□□ -1.91
SYNGAP1-220ENST00000637194 PAOXQ6QHF9 649 aa3.11□□□□□ -1.91
SYNGAP1-220ENST00000637194 KRTAP19-1Q8IUB9 90 aa3.11□□□□□ -1.91
SYNGAP1-220ENST00000637194 KRTAP1-3Q8IUG1 177 aa3.11□□□□□ -1.91
SYNGAP1-220ENST00000637194 C2CD4AQ8NCU7 369 aaPredicted RBP3.11□□□□□ -1.91
SYNGAP1-220ENST00000637194 EZH1Q92800 747 aaPredicted RBP3.11□□□□□ -1.91
SYNGAP1-220ENST00000637194 MFSD14AQ96MC6 490 aa3.11□□□□□ -1.91
SYNGAP1-220ENST00000637194 CITED4Q96RK1 184 aa3.11□□□□□ -1.91
SYNGAP1-220ENST00000637194 TCF12Q99081 682 aa3.11□□□□□ -1.91
SYNGAP1-220ENST00000637194 CLEC4MQ9H2X3 399 aaPredicted RBP3.11□□□□□ -1.91
SYNGAP1-220ENST00000637194 C1orf115Q9H7X2 142 aa3.11□□□□□ -1.91
SYNGAP1-220ENST00000637194 LATS2Q9NRM7 1088 aa3.11□□□□□ -1.91
SYNGAP1-220ENST00000637194 SYNGAP1Q96PV0 1343 aa3.11□□□□□ -1.91
SYNGAP1-220ENST00000637194 FAM95CA0A1B0GW59 222 aa3.1□□□□□ -1.91
SYNGAP1-220ENST00000637194 ADAMTS4O75173 837 aa3.1□□□□□ -1.91
SYNGAP1-220ENST00000637194 PRNPP04156 253 aa3.1□□□□□ -1.91
SYNGAP1-220ENST00000637194 CYP11A1P05108 521 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms