RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 LNPKQ9C0E8 428 aa19.6■□□□□ 0.73
CLN6-216ENST00000636876 PSMD14O00487 310 aa19.59■□□□□ 0.73
CLN6-216ENST00000636876 GTF2IP78347 998 aa19.59■□□□□ 0.73
CLN6-216ENST00000636876 RASGRF1Q13972 1273 aa19.59■□□□□ 0.73
CLN6-216ENST00000636876 STRIP1Q5VSL9 837 aa19.59■□□□□ 0.73
CLN6-216ENST00000636876 TTLL5Q6EMB2 1281 aa19.59■□□□□ 0.73
CLN6-216ENST00000636876 C16orf71Q8IYS4 520 aaPredicted RBP19.59■□□□□ 0.73
CLN6-216ENST00000636876 ZNF512BQ96KM6 892 aaPredicted RBP19.59■□□□□ 0.73
CLN6-216ENST00000636876 COL1A1P02452 1464 aaPredicted RBP19.59■□□□□ 0.73
CLN6-216ENST00000636876 VIL1P09327 827 aaKnown RBP19.58■□□□□ 0.72
CLN6-216ENST00000636876 CHAF1AQ13111 956 aaPredicted RBP19.58■□□□□ 0.72
CLN6-216ENST00000636876 DACT2Q5SW24 774 aa19.58■□□□□ 0.72
CLN6-216ENST00000636876 GPC2Q8N158 579 aa19.58■□□□□ 0.72
CLN6-216ENST00000636876 OTUD7AQ8TE49 926 aaPredicted RBP19.58■□□□□ 0.72
CLN6-216ENST00000636876 FBXW7Q969H0 707 aa19.58■□□□□ 0.72
CLN6-216ENST00000636876 DENND2AQ9ULE3 1009 aa19.58■□□□□ 0.72
CLN6-216ENST00000636876 GJA3Q9Y6H8 435 aa19.58■□□□□ 0.72
CLN6-216ENST00000636876 MYH13Q9UKX3 1938 aa19.58■□□□□ 0.72
CLN6-216ENST00000636876 ZNF646O15015 1829 aaPredicted RBP19.58■□□□□ 0.72
CLN6-216ENST00000636876 PDS5AQ29RF7 1337 aaKnown RBP19.57■□□□□ 0.72
CLN6-216ENST00000636876 GLTPD2A6NH11 291 aa19.57■□□□□ 0.72
CLN6-216ENST00000636876 SCARF1Q14162 830 aa19.57■□□□□ 0.72
CLN6-216ENST00000636876 DPY19L2Q6NUT2 758 aa19.57■□□□□ 0.72
CLN6-216ENST00000636876 GPATCH3Q96I76 525 aa19.57■□□□□ 0.72
CLN6-216ENST00000636876 JAG2Q9Y219 1238 aa19.57■□□□□ 0.72
CLN6-216ENST00000636876 SALL3Q9BXA9 1300 aa19.56■□□□□ 0.72
CLN6-216ENST00000636876 DDNO94850 711 aaPredicted RBP19.56■□□□□ 0.72
CLN6-216ENST00000636876 MCAMP43121 646 aa19.56■□□□□ 0.72
CLN6-216ENST00000636876 RSBN1LQ6PCB5 846 aaPredicted RBP19.56■□□□□ 0.72
CLN6-216ENST00000636876 ECHDC1Q9NTX5 307 aa19.56■□□□□ 0.72
CLN6-216ENST00000636876 HMG20BQ9P0W2 317 aa19.56■□□□□ 0.72
CLN6-216ENST00000636876 KIF3CO14782 793 aa19.55■□□□□ 0.72
CLN6-216ENST00000636876 ATP5JP18859 108 aa19.55■□□□□ 0.72
CLN6-216ENST00000636876 FKBP1AP62942 108 aaKnown RBP19.55■□□□□ 0.72
CLN6-216ENST00000636876 PI16Q6UXB8 463 aa19.55■□□□□ 0.72
CLN6-216ENST00000636876 SPATA5Q8NB90 893 aa19.55■□□□□ 0.72
CLN6-216ENST00000636876 WDR66Q8TBY9 1149 aa19.55■□□□□ 0.72
CLN6-216ENST00000636876 TBC1D22AQ8WUA7 517 aa19.55■□□□□ 0.72
CLN6-216ENST00000636876 AKAP11Q9UKA4 1901 aa19.55■□□□□ 0.72
CLN6-216ENST00000636876 MX1P20591 662 aa19.54■□□□□ 0.72
CLN6-216ENST00000636876 GMPSP49915 693 aaPredicted RBP19.54■□□□□ 0.72
CLN6-216ENST00000636876 CERS5Q8N5B7 392 aa19.54■□□□□ 0.72
CLN6-216ENST00000636876 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.54■□□□□ 0.72
CLN6-216ENST00000636876 GMLQ99445 158 aa19.54■□□□□ 0.72
CLN6-216ENST00000636876 MXD3Q9BW11 206 aa19.54■□□□□ 0.72
CLN6-216ENST00000636876 SNRKQ9NRH2 765 aa19.54■□□□□ 0.72
CLN6-216ENST00000636876 ZBTB12Q9Y330 459 aaPredicted RBP19.54■□□□□ 0.72
CLN6-216ENST00000636876 TTC41PQ6P2S7 1318 aa19.53■□□□□ 0.72
CLN6-216ENST00000636876 MYO3BQ8WXR4 1341 aa19.53■□□□□ 0.72
CLN6-216ENST00000636876 HSPA6P17066 643 aa19.53■□□□□ 0.72
CLN6-216ENST00000636876 RPS12P25398 132 aaKnown RBP19.53■□□□□ 0.72
CLN6-216ENST00000636876 MFSD14BQ5SR56 506 aa19.53■□□□□ 0.72
CLN6-216ENST00000636876 TSHZ3Q63HK5 1081 aa19.53■□□□□ 0.72
CLN6-216ENST00000636876 AGBL3Q8NEM8 1001 aa19.53■□□□□ 0.72
CLN6-216ENST00000636876 L3MBTL3Q96JM7 780 aaPredicted RBP19.53■□□□□ 0.72
CLN6-216ENST00000636876 STAP2Q9UGK3 403 aa19.53■□□□□ 0.72
CLN6-216ENST00000636876 SALL1Q9NSC2 1324 aa19.52■□□□□ 0.72
CLN6-216ENST00000636876 ZAP70P43403 619 aa19.52■□□□□ 0.72
CLN6-216ENST00000636876 DPF2Q92785 391 aa19.52■□□□□ 0.72
CLN6-216ENST00000636876 PDE4AP27815 886 aa19.51■□□□□ 0.71
CLN6-216ENST00000636876 PDE1AP54750 535 aa19.51■□□□□ 0.71
CLN6-216ENST00000636876 BOLA2Q9H3K6 86 aa19.51■□□□□ 0.71
CLN6-216ENST00000636876 WDR90Q96KV7 1748 aa19.51■□□□□ 0.71
CLN6-216ENST00000636876 ERC2O15083 957 aa19.5■□□□□ 0.71
CLN6-216ENST00000636876 GLRX3O76003 335 aaKnown RBP19.5■□□□□ 0.71
CLN6-216ENST00000636876 SCNN1DP51172 638 aa19.5■□□□□ 0.71
CLN6-216ENST00000636876 PLEKHM2Q8IWE5 1019 aa19.5■□□□□ 0.71
CLN6-216ENST00000636876 ZGPATQ8N5A5 531 aaKnown RBP19.5■□□□□ 0.71
CLN6-216ENST00000636876 PI4K2BQ8TCG2 481 aa19.5■□□□□ 0.71
CLN6-216ENST00000636876 HAUS7Q99871 368 aa19.5■□□□□ 0.71
CLN6-216ENST00000636876 SUGT1Q9Y2Z0 365 aa19.5■□□□□ 0.71
CLN6-216ENST00000636876 NDUFB9Q9Y6M9 179 aa19.5■□□□□ 0.71
CLN6-216ENST00000636876 AOX1Q06278 1338 aa19.5■□□□□ 0.71
CLN6-216ENST00000636876 CYP2E1P05181 493 aaPredicted RBP19.49■□□□□ 0.71
CLN6-216ENST00000636876 GRIK5Q16478 980 aa19.49■□□□□ 0.71
CLN6-216ENST00000636876 DNAJC2Q99543 621 aaKnown RBP19.49■□□□□ 0.71
CLN6-216ENST00000636876 GPRC5DQ9NZD1 345 aa19.49■□□□□ 0.71
CLN6-216ENST00000636876 PRDX5P30044 214 aa19.48■□□□□ 0.71
CLN6-216ENST00000636876 SPTY2D1Q68D10 685 aaPredicted RBP19.48■□□□□ 0.71
CLN6-216ENST00000636876 TBC1D9Q6ZT07 1266 aa19.48■□□□□ 0.71
CLN6-216ENST00000636876 KIAA0825Q8IV33 1275 aa19.48■□□□□ 0.71
CLN6-216ENST00000636876 OSBPL3Q9H4L5 887 aa19.48■□□□□ 0.71
CLN6-216ENST00000636876 ABCF2Q9UG63 623 aa19.48■□□□□ 0.71
CLN6-216ENST00000636876 CNOT7Q9UIV1 285 aaKnown RBP19.48■□□□□ 0.71
CLN6-216ENST00000636876 LDHBP07195 334 aaKnown RBP19.47■□□□□ 0.71
CLN6-216ENST00000636876 USP17L8P0C7I0 530 aa19.47■□□□□ 0.71
CLN6-216ENST00000636876 LMOD1P29536 600 aaPredicted RBP19.47■□□□□ 0.71
CLN6-216ENST00000636876 ZNF280AP59817 542 aaPredicted RBP19.47■□□□□ 0.71
CLN6-216ENST00000636876 MICALL2Q8IY33 904 aa19.47■□□□□ 0.71
CLN6-216ENST00000636876 PIH1D3Q9NQM4 214 aaKnown RBP19.47■□□□□ 0.71
CLN6-216ENST00000636876 PAG1Q9NWQ8 432 aa19.47■□□□□ 0.71
CLN6-216ENST00000636876 SHTN1A0MZ66 631 aa19.46■□□□□ 0.71
CLN6-216ENST00000636876 IQCA1LA6NCM1 817 aa19.46■□□□□ 0.71
CLN6-216ENST00000636876 POTECB2RU33 542 aa19.46■□□□□ 0.71
CLN6-216ENST00000636876 F8W031 263 aaPredicted RBP19.46■□□□□ 0.71
CLN6-216ENST00000636876 GOLIM4O00461 696 aa19.46■□□□□ 0.71
CLN6-216ENST00000636876 EPS15P42566 896 aa19.46■□□□□ 0.71
CLN6-216ENST00000636876 MMP14P50281 582 aa19.46■□□□□ 0.71
CLN6-216ENST00000636876 TTF1Q15361 905 aaPredicted RBP19.46■□□□□ 0.71
CLN6-216ENST00000636876 ERICH6Q7L0X2 663 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms