RNA–Protein interactions for RNA: ENST00000636754.1

LGI1-222, Transcript of leucine rich glioma inactivated 1, human

TSL 5

Gene LGI1, Length 2,200 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LGI1-222	ENST00000636754	DBF4	Q9UBU7	674 aa	Predicted RBP	4.6	□□□□□ -1.67
LGI1-222	ENST00000636754	GNE	Q9Y223	722 aa	Known RBP	4.6	□□□□□ -1.67
LGI1-222	ENST00000636754	NDUFB9	Q9Y6M9	179 aa		4.6	□□□□□ -1.67
LGI1-222	ENST00000636754	KIAA1551	Q9HCM1	1747 aa		4.6	□□□□□ -1.67
LGI1-222	ENST00000636754	CARMIL3	Q8ND23	1372 aa		4.59	□□□□□ -1.67
LGI1-222	ENST00000636754	ADAM23	O75077	832 aa		4.59	□□□□□ -1.67
LGI1-222	ENST00000636754	ATG7	O95352	703 aa		4.59	□□□□□ -1.67
LGI1-222	ENST00000636754	TRIM28	Q13263	835 aa	Known RBP	4.59	□□□□□ -1.67
LGI1-222	ENST00000636754	ALDH1L2	Q3SY69	923 aa		4.59	□□□□□ -1.67
LGI1-222	ENST00000636754	KMT5B	Q4FZB7	885 aa		4.59	□□□□□ -1.67
LGI1-222	ENST00000636754	PARP10	Q53GL7	1025 aa		4.59	□□□□□ -1.67
LGI1-222	ENST00000636754	FAM182B	Q5T319	152 aa		4.59	□□□□□ -1.67
LGI1-222	ENST00000636754	CCDC30	Q5VVM6	783 aa		4.59	□□□□□ -1.67
LGI1-222	ENST00000636754	MCM10	Q7L590	875 aa		4.59	□□□□□ -1.67
LGI1-222	ENST00000636754	ALG2	Q9H553	416 aa		4.59	□□□□□ -1.67
LGI1-222	ENST00000636754	TFCP2L1	Q9NZI6	479 aa		4.59	□□□□□ -1.67
LGI1-222	ENST00000636754	NDUFV2	P19404	249 aa		4.58	□□□□□ -1.68
LGI1-222	ENST00000636754	PLA2G2C	Q5R387	149 aa		4.58	□□□□□ -1.68
LGI1-222	ENST00000636754	GPAT2	Q6NUI2	795 aa		4.58	□□□□□ -1.68
LGI1-222	ENST00000636754	PTF1A	Q7RTS3	328 aa		4.58	□□□□□ -1.68
LGI1-222	ENST00000636754	DNAJC10	Q8IXB1	793 aa		4.58	□□□□□ -1.68
LGI1-222	ENST00000636754	UCN2	Q96RP3	112 aa		4.58	□□□□□ -1.68
LGI1-222	ENST00000636754	KIAA1522	Q9P206	1035 aa	Predicted RBP	4.58	□□□□□ -1.68
LGI1-222	ENST00000636754	ARFGEF1	Q9Y6D6	1849 aa		4.58	□□□□□ -1.68
LGI1-222	ENST00000636754	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	4.58	□□□□□ -1.68
LGI1-222	ENST00000636754	DDX58	O95786	925 aa	Known RBP	4.58	□□□□□ -1.68
LGI1-222	ENST00000636754	CD46	P15529	392 aa		4.58	□□□□□ -1.68
LGI1-222	ENST00000636754	RFC4	P35249	363 aa		4.58	□□□□□ -1.68
LGI1-222	ENST00000636754	TGFB2	P61812	414 aa		4.58	□□□□□ -1.68
LGI1-222	ENST00000636754	SLFN5	Q08AF3	891 aa		4.58	□□□□□ -1.68
LGI1-222	ENST00000636754	KIF6	Q6ZMV9	814 aa		4.58	□□□□□ -1.68
LGI1-222	ENST00000636754	LRP10	Q7Z4F1	713 aa		4.58	□□□□□ -1.68
LGI1-222	ENST00000636754	NYX	Q9GZU5	481 aa		4.58	□□□□□ -1.68
LGI1-222	ENST00000636754	MBIP	Q9NS73	344 aa		4.58	□□□□□ -1.68
LGI1-222	ENST00000636754	PTPRC	P08575	1304 aa		4.58	□□□□□ -1.68
LGI1-222	ENST00000636754	MAP3K15	Q6ZN16	1313 aa		4.58	□□□□□ -1.68
LGI1-222	ENST00000636754	FANCI	Q9NVI1	1328 aa		4.58	□□□□□ -1.68
LGI1-222	ENST00000636754	BRCA1	P38398	1863 aa	Known RBP	4.57	□□□□□ -1.68
LGI1-222	ENST00000636754	NR1I2	O75469	434 aa		4.57	□□□□□ -1.68
LGI1-222	ENST00000636754	CD2BP2	O95400	341 aa	Known RBP	4.57	□□□□□ -1.68
LGI1-222	ENST00000636754	TM4SF1	P30408	202 aa		4.57	□□□□□ -1.68
LGI1-222	ENST00000636754	CCDC184	Q52MB2	194 aa		4.57	□□□□□ -1.68
LGI1-222	ENST00000636754	COL23A1	Q86Y22	540 aa	Predicted RBP	4.57	□□□□□ -1.68
LGI1-222	ENST00000636754	NUTM1	Q86Y26	1132 aa		4.57	□□□□□ -1.68
LGI1-222	ENST00000636754	CCDC146	Q8IYE0	955 aa		4.57	□□□□□ -1.68
LGI1-222	ENST00000636754	FAM177A1	Q8N128	213 aa	Predicted RBP	4.57	□□□□□ -1.68
LGI1-222	ENST00000636754	HMX1	Q9NP08	348 aa	Predicted RBP	4.57	□□□□□ -1.68
LGI1-222	ENST00000636754	NUP98	P52948	1817 aa		4.57	□□□□□ -1.68
LGI1-222	ENST00000636754	AFDN	P55196	1824 aa	Known RBP	4.57	□□□□□ -1.68
LGI1-222	ENST00000636754	TTC24	A2A3L6	582 aa	Predicted RBP	4.57	□□□□□ -1.68
LGI1-222	ENST00000636754	KLRG2	A4D1S0	409 aa	Predicted RBP	4.57	□□□□□ -1.68
LGI1-222	ENST00000636754	ACTN4	O43707	911 aa	Known RBP	4.57	□□□□□ -1.68
LGI1-222	ENST00000636754	CAMTA2	O94983	1202 aa		4.57	□□□□□ -1.68
LGI1-222	ENST00000636754	GYS1	P13807	737 aa		4.57	□□□□□ -1.68
LGI1-222	ENST00000636754	RPIA	P49247	311 aa		4.57	□□□□□ -1.68
LGI1-222	ENST00000636754	R3HDM1	Q15032	1099 aa	Known RBP	4.57	□□□□□ -1.68
LGI1-222	ENST00000636754	DUSP27	Q5VZP5	1158 aa		4.57	□□□□□ -1.68
LGI1-222	ENST00000636754	TMC4	Q7Z404	712 aa		4.57	□□□□□ -1.68
LGI1-222	ENST00000636754	TTC13	Q8NBP0	860 aa		4.57	□□□□□ -1.68
LGI1-222	ENST00000636754	PLBD2	Q8NHP8	589 aa		4.57	□□□□□ -1.68
LGI1-222	ENST00000636754	ARHGAP45	Q92619	1136 aa		4.57	□□□□□ -1.68
LGI1-222	ENST00000636754	MRRF	Q96E11	262 aa	Known RBP	4.57	□□□□□ -1.68
LGI1-222	ENST00000636754	HDAC5	Q9UQL6	1122 aa		4.57	□□□□□ -1.68
LGI1-222	ENST00000636754	ZBTB1	Q9Y2K1	713 aa		4.57	□□□□□ -1.68
LGI1-222	ENST00000636754	RTL9	Q8NET4	1388 aa		4.56	□□□□□ -1.68
LGI1-222	ENST00000636754	LRRC37A	A6NMS7	1700 aa		4.56	□□□□□ -1.68
LGI1-222	ENST00000636754	PTCD1	O75127	700 aa	Known RBP	4.56	□□□□□ -1.68
LGI1-222	ENST00000636754	SLC39A6	Q13433	755 aa		4.56	□□□□□ -1.68
LGI1-222	ENST00000636754	PRR7	Q8TB68	274 aa		4.56	□□□□□ -1.68
LGI1-222	ENST00000636754	STK31	Q9BXU1	1019 aa		4.56	□□□□□ -1.68
LGI1-222	ENST00000636754	TRIM34	Q9BYJ4	488 aa		4.56	□□□□□ -1.68
LGI1-222	ENST00000636754	ZC3H4	Q9UPT8	1303 aa	Known RBP	4.56	□□□□□ -1.68
LGI1-222	ENST00000636754	GJA5	P36382	358 aa		4.56	□□□□□ -1.68
LGI1-222	ENST00000636754	CTDSPL2	Q05D32	466 aa		4.56	□□□□□ -1.68
LGI1-222	ENST00000636754	DCTN1	Q14203	1278 aa		4.56	□□□□□ -1.68
LGI1-222	ENST00000636754	TWISTNB	Q3B726	338 aa	Predicted RBP	4.56	□□□□□ -1.68
LGI1-222	ENST00000636754	SLC10A5	Q5PT55	438 aa		4.56	□□□□□ -1.68
LGI1-222	ENST00000636754	SOGA3	Q5TF21	947 aa		4.56	□□□□□ -1.68
LGI1-222	ENST00000636754	CC2D2B	Q6DHV5	1058 aa		4.56	□□□□□ -1.68
LGI1-222	ENST00000636754	DZIP3	Q86Y13	1208 aa	Known RBP	4.56	□□□□□ -1.68
LGI1-222	ENST00000636754	ZNF34	Q8IZ26	560 aa		4.56	□□□□□ -1.68
LGI1-222	ENST00000636754	RBM46	Q8TBY0	533 aa	Known RBP	4.56	□□□□□ -1.68
LGI1-222	ENST00000636754	MAFB	Q9Y5Q3	323 aa	Predicted RBP	4.56	□□□□□ -1.68
LGI1-222	ENST00000636754	PARP3	Q9Y6F1	533 aa		4.56	□□□□□ -1.68
LGI1-222	ENST00000636754	KIF16B	Q96L93	1317 aa		4.55	□□□□□ -1.68
LGI1-222	ENST00000636754	CDHR2	Q9BYE9	1310 aa		4.55	□□□□□ -1.68
LGI1-222	ENST00000636754	DDX60	Q8IY21	1712 aa	Known RBP	4.55	□□□□□ -1.68
LGI1-222	ENST00000636754	POLRMT	O00411	1230 aa	Known RBP	4.55	□□□□□ -1.68
LGI1-222	ENST00000636754	VAMP4	O75379	141 aa		4.55	□□□□□ -1.68
LGI1-222	ENST00000636754	ALDH1L1	O75891	902 aa		4.55	□□□□□ -1.68
LGI1-222	ENST00000636754	PDE6B	P35913	854 aa		4.55	□□□□□ -1.68
LGI1-222	ENST00000636754	STYK1	Q6J9G0	422 aa		4.55	□□□□□ -1.68
LGI1-222	ENST00000636754	NBPF10	Q6P3W6	841 aa	Known RBP	4.55	□□□□□ -1.68
LGI1-222	ENST00000636754	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	4.55	□□□□□ -1.68
LGI1-222	ENST00000636754	PPP1R42	Q7Z4L9	355 aa		4.55	□□□□□ -1.68
LGI1-222	ENST00000636754	FAM9B	Q8IZU0	186 aa		4.55	□□□□□ -1.68
LGI1-222	ENST00000636754	NBPF15	Q8N660	670 aa		4.55	□□□□□ -1.68
LGI1-222	ENST00000636754	ISCA1	Q9BUE6	129 aa		4.55	□□□□□ -1.68
LGI1-222	ENST00000636754	BRIP1	Q9BX63	1249 aa		4.55	□□□□□ -1.68
LGI1-222	ENST00000636754	VPS33B	Q9H267	617 aa		4.55	□□□□□ -1.68

Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms