RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 CPDO75976 1380 aa12.5□□□□□ -0.41
PSPC1-207ENST00000635251 A0A087WWV3 80 aa12.5□□□□□ -0.41
PSPC1-207ENST00000635251 KLF18A0A0U1RQI7 1052 aa12.5□□□□□ -0.41
PSPC1-207ENST00000635251 CPLX1O14810 134 aa12.5□□□□□ -0.41
PSPC1-207ENST00000635251 PRC1O43663 620 aa12.5□□□□□ -0.41
PSPC1-207ENST00000635251 DHX16O60231 1041 aaKnown RBP12.5□□□□□ -0.41
PSPC1-207ENST00000635251 FDPSP14324 419 aaKnown RBP12.5□□□□□ -0.41
PSPC1-207ENST00000635251 OTUD7BQ6GQQ9 843 aa12.5□□□□□ -0.41
PSPC1-207ENST00000635251 RALYLQ86SE5 291 aaKnown RBP12.5□□□□□ -0.41
PSPC1-207ENST00000635251 ILDR1Q86SU0 546 aaPredicted RBP12.5□□□□□ -0.41
PSPC1-207ENST00000635251 ENGASEQ8NFI3 743 aa12.5□□□□□ -0.41
PSPC1-207ENST00000635251 ERCC4Q92889 916 aaPredicted RBP12.5□□□□□ -0.41
PSPC1-207ENST00000635251 MRFAP1L1Q96HT8 127 aa12.5□□□□□ -0.41
PSPC1-207ENST00000635251 NAT10Q9H0A0 1025 aaKnown RBP12.5□□□□□ -0.41
PSPC1-207ENST00000635251 TJP1Q07157 1748 aa12.5□□□□□ -0.41
PSPC1-207ENST00000635251 NUP188Q5SRE5 1749 aa12.5□□□□□ -0.41
PSPC1-207ENST00000635251 MYH15Q9Y2K3 1946 aa12.49□□□□□ -0.41
PSPC1-207ENST00000635251 PARP4Q9UKK3 1724 aaKnown RBP12.49□□□□□ -0.41
PSPC1-207ENST00000635251 GOLGA8BA8MQT2 603 aa12.49□□□□□ -0.41
PSPC1-207ENST00000635251 POLR3DP05423 398 aaPredicted RBP12.49□□□□□ -0.41
PSPC1-207ENST00000635251 RAB11FIP4Q86YS3 637 aa12.49□□□□□ -0.41
PSPC1-207ENST00000635251 RTEL1Q9NZ71 1219 aa12.49□□□□□ -0.41
PSPC1-207ENST00000635251 WDR17Q8IZU2 1322 aa12.49□□□□□ -0.41
PSPC1-207ENST00000635251 A0A1B0GVL5 298 aa12.49□□□□□ -0.41
PSPC1-207ENST00000635251 FGAP02671 866 aa12.49□□□□□ -0.41
PSPC1-207ENST00000635251 ZAP70P43403 619 aa12.49□□□□□ -0.41
PSPC1-207ENST00000635251 TCIRG1Q13488 830 aa12.49□□□□□ -0.41
PSPC1-207ENST00000635251 AOPEPQ8N6M6 819 aa12.49□□□□□ -0.41
PSPC1-207ENST00000635251 NCOA7Q8NI08 942 aa12.49□□□□□ -0.41
PSPC1-207ENST00000635251 ORC3Q9UBD5 711 aaPredicted RBP12.49□□□□□ -0.41
PSPC1-207ENST00000635251 DCCP43146 1447 aa12.49□□□□□ -0.41
PSPC1-207ENST00000635251 SPEF2Q9C093 1822 aa12.48□□□□□ -0.41
PSPC1-207ENST00000635251 ZNF213O14771 459 aa12.48□□□□□ -0.41
PSPC1-207ENST00000635251 IFIT5Q13325 482 aaKnown RBP12.48□□□□□ -0.41
PSPC1-207ENST00000635251 PPP4R3BQ5MIZ7 849 aa12.48□□□□□ -0.41
PSPC1-207ENST00000635251 ADALQ6DHV7 355 aa12.48□□□□□ -0.41
PSPC1-207ENST00000635251 FILIP1Q7Z7B0 1213 aa12.48□□□□□ -0.41
PSPC1-207ENST00000635251 LRRC8AQ8IWT6 810 aa12.48□□□□□ -0.41
PSPC1-207ENST00000635251 DHX40Q8IX18 779 aaKnown RBP12.48□□□□□ -0.41
PSPC1-207ENST00000635251 PDCL2Q8N4E4 241 aa12.48□□□□□ -0.41
PSPC1-207ENST00000635251 APPBP2Q92624 585 aa12.48□□□□□ -0.41
PSPC1-207ENST00000635251 ISCA1Q9BUE6 129 aa12.48□□□□□ -0.41
PSPC1-207ENST00000635251 CLIC4Q9Y696 253 aa12.48□□□□□ -0.41
PSPC1-207ENST00000635251 KCPQ6ZWJ8 1503 aa12.48□□□□□ -0.41
PSPC1-207ENST00000635251 SMTNL1A8MU46 457 aa12.48□□□□□ -0.41
PSPC1-207ENST00000635251 NEMFO60524 1076 aa12.48□□□□□ -0.41
PSPC1-207ENST00000635251 IL2RBP14784 551 aa12.48□□□□□ -0.41
PSPC1-207ENST00000635251 EVCP57679 992 aa12.48□□□□□ -0.41
PSPC1-207ENST00000635251 SCARF1Q14162 830 aa12.48□□□□□ -0.41
PSPC1-207ENST00000635251 KIF6Q6ZMV9 814 aa12.48□□□□□ -0.41
PSPC1-207ENST00000635251 SYNE3Q6ZMZ3 975 aa12.48□□□□□ -0.41
PSPC1-207ENST00000635251 FMR1NBQ8N0W7 255 aaPredicted RBP12.48□□□□□ -0.41
PSPC1-207ENST00000635251 FBXL16Q8N461 479 aa12.48□□□□□ -0.41
PSPC1-207ENST00000635251 FAM89AQ96GI7 184 aa12.48□□□□□ -0.41
PSPC1-207ENST00000635251 PUS7LQ9H0K6 701 aaKnown RBP12.48□□□□□ -0.41
PSPC1-207ENST00000635251 LINC00301Q8NCQ3 95 aa12.47□□□□□ -0.41
PSPC1-207ENST00000635251 KCNG4Q8TDN1 519 aa12.47□□□□□ -0.41
PSPC1-207ENST00000635251 ZNF592Q92610 1267 aa12.47□□□□□ -0.41
PSPC1-207ENST00000635251 FBXO3Q9UK99 471 aa12.47□□□□□ -0.41
PSPC1-207ENST00000635251 A0A1W2PQ27 194 aa12.46□□□□□ -0.41
PSPC1-207ENST00000635251 A0A1W2PQ64 194 aa12.46□□□□□ -0.41
PSPC1-207ENST00000635251 A0A1W2PQD8 194 aa12.46□□□□□ -0.41
PSPC1-207ENST00000635251 TULP1O00294 542 aaPredicted RBP12.46□□□□□ -0.41
PSPC1-207ENST00000635251 SPTLC2O15270 562 aa12.46□□□□□ -0.41
PSPC1-207ENST00000635251 GPAA1O43292 621 aa12.46□□□□□ -0.41
PSPC1-207ENST00000635251 NDUFA8P51970 172 aa12.46□□□□□ -0.41
PSPC1-207ENST00000635251 ARID5BQ14865 1188 aa12.46□□□□□ -0.41
PSPC1-207ENST00000635251 METTL24Q5JXM2 366 aa12.46□□□□□ -0.41
PSPC1-207ENST00000635251 PI16Q6UXB8 463 aa12.46□□□□□ -0.41
PSPC1-207ENST00000635251 MB21D2Q8IYB1 491 aaPredicted RBP12.46□□□□□ -0.41
PSPC1-207ENST00000635251 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.46□□□□□ -0.41
PSPC1-207ENST00000635251 TAOK2Q9UL54 1235 aa12.46□□□□□ -0.41
PSPC1-207ENST00000635251 PAXBP1Q9Y5B6 917 aa12.46□□□□□ -0.41
PSPC1-207ENST00000635251 FOXP2O15409 715 aa12.46□□□□□ -0.42
PSPC1-207ENST00000635251 CTIFO43310 598 aaKnown RBP12.46□□□□□ -0.42
PSPC1-207ENST00000635251 YEATS4O95619 227 aa12.46□□□□□ -0.42
PSPC1-207ENST00000635251 PCCAP05165 728 aaPredicted RBP12.46□□□□□ -0.42
PSPC1-207ENST00000635251 SKILP12757 684 aa12.46□□□□□ -0.42
PSPC1-207ENST00000635251 TRDNQ13061 729 aa12.46□□□□□ -0.42
PSPC1-207ENST00000635251 BRAPQ7Z569 592 aa12.46□□□□□ -0.42
PSPC1-207ENST00000635251 CCDC112Q8NEF3 446 aa12.46□□□□□ -0.42
PSPC1-207ENST00000635251 FBXO18Q8NFZ0 1043 aa12.46□□□□□ -0.42
PSPC1-207ENST00000635251 STRN4Q9NRL3 753 aa12.46□□□□□ -0.42
PSPC1-207ENST00000635251 CCDC69A6NI79 296 aa12.45□□□□□ -0.42
PSPC1-207ENST00000635251 NKX1-1Q15270 411 aaPredicted RBP12.45□□□□□ -0.42
PSPC1-207ENST00000635251 ATP2B3Q16720 1220 aa12.45□□□□□ -0.42
PSPC1-207ENST00000635251 MYSM1Q5VVJ2 828 aa12.45□□□□□ -0.42
PSPC1-207ENST00000635251 CEP135Q66GS9 1140 aa12.45□□□□□ -0.42
PSPC1-207ENST00000635251 POLR3EQ9NVU0 708 aa12.45□□□□□ -0.42
PSPC1-207ENST00000635251 TMOD3Q9NYL9 352 aa12.45□□□□□ -0.42
PSPC1-207ENST00000635251 UBR2Q8IWV8 1755 aa12.45□□□□□ -0.42
PSPC1-207ENST00000635251 APPP05067 770 aa12.45□□□□□ -0.42
PSPC1-207ENST00000635251 ANTXR2P58335 489 aa12.45□□□□□ -0.42
PSPC1-207ENST00000635251 CBX1P83916 185 aa12.45□□□□□ -0.42
PSPC1-207ENST00000635251 SMAP1Q8IYB5 467 aaPredicted RBP12.45□□□□□ -0.42
PSPC1-207ENST00000635251 GJB4Q9NTQ9 266 aa12.45□□□□□ -0.42
PSPC1-207ENST00000635251 KIAA1468Q9P260 1216 aa12.45□□□□□ -0.42
PSPC1-207ENST00000635251 HPS5Q9UPZ3 1129 aa12.45□□□□□ -0.42
PSPC1-207ENST00000635251 TPM4P67936 248 aa12.44□□□□□ -0.42
PSPC1-207ENST00000635251 GNL2Q13823 731 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms