RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, human

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCB1-208	ENST00000634926	KRTAP9-3	Q9BYQ3	159 aa		5.06	□□□□□ -1.6
SMARCB1-208	ENST00000634926	CNTN3	Q9P232	1028 aa		5.06	□□□□□ -1.6
SMARCB1-208	ENST00000634926	KANSL3	Q9P2N6	904 aa		5.06	□□□□□ -1.6
SMARCB1-208	ENST00000634926	PRKAG2	Q9UGJ0	569 aa		5.06	□□□□□ -1.6
SMARCB1-208	ENST00000634926	FAM95C	A0A1B0GW59	222 aa		5.05	□□□□□ -1.6
SMARCB1-208	ENST00000634926	FAM196B	A6NMK8	535 aa		5.05	□□□□□ -1.6
SMARCB1-208	ENST00000634926	ZAR1	Q86SH2	424 aa		5.05	□□□□□ -1.6
SMARCB1-208	ENST00000634926	PRIMPOL	Q96LW4	560 aa		5.05	□□□□□ -1.6
SMARCB1-208	ENST00000634926	OSGEP	Q9NPF4	335 aa		5.05	□□□□□ -1.6
SMARCB1-208	ENST00000634926	LOC100289279	A0A1B0GTE1	492 aa		5.04	□□□□□ -1.6
SMARCB1-208	ENST00000634926	ZNF792	Q3KQV3	632 aa		5.04	□□□□□ -1.6
SMARCB1-208	ENST00000634926	WWC1	Q8IX03	1113 aa		5.04	□□□□□ -1.6
SMARCB1-208	ENST00000634926	C2CD4A	Q8NCU7	369 aa	Predicted RBP	5.04	□□□□□ -1.6
SMARCB1-208	ENST00000634926	SMG8	Q8ND04	991 aa	Known RBP	5.04	□□□□□ -1.6
SMARCB1-208	ENST00000634926	BCL7C	Q8WUZ0	217 aa	Predicted RBP	5.04	□□□□□ -1.6
SMARCB1-208	ENST00000634926	GLMN	Q92990	594 aa		5.04	□□□□□ -1.6
SMARCB1-208	ENST00000634926	WNT8B	Q93098	351 aa		5.04	□□□□□ -1.6
SMARCB1-208	ENST00000634926	TBC1D32	Q96NH3	1257 aa		5.04	□□□□□ -1.6
SMARCB1-208	ENST00000634926	TMEM63C	Q9P1W3	806 aa		5.04	□□□□□ -1.6
SMARCB1-208	ENST00000634926	SOX13	Q9UN79	622 aa		5.04	□□□□□ -1.6
SMARCB1-208	ENST00000634926	SOX1	O00570	391 aa	Predicted RBP	5.03	□□□□□ -1.6
SMARCB1-208	ENST00000634926	CPSF6	Q16630	551 aa	Known RBP eCLIP	5.03	□□□□□ -1.6
SMARCB1-208	ENST00000634926	TTC39B	Q5VTQ0	682 aa	Predicted RBP	5.03	□□□□□ -1.6
SMARCB1-208	ENST00000634926	NCAPG2	Q86XI2	1143 aa		5.03	□□□□□ -1.6
SMARCB1-208	ENST00000634926	GIMAP7	Q8NHV1	300 aa		5.03	□□□□□ -1.6
SMARCB1-208	ENST00000634926	GPR152	Q8TDT2	470 aa		5.03	□□□□□ -1.6
SMARCB1-208	ENST00000634926	PPP1R12C	Q9BZL4	782 aa		5.03	□□□□□ -1.6
SMARCB1-208	ENST00000634926	SUGCT	Q9HAC7	445 aa		5.03	□□□□□ -1.6
SMARCB1-208	ENST00000634926	ABI2	Q9NYB9	513 aa	Predicted RBP	5.03	□□□□□ -1.6
SMARCB1-208	ENST00000634926	SALL4	Q9UJQ4	1053 aa		5.03	□□□□□ -1.6
SMARCB1-208	ENST00000634926	MESP2	Q0VG99	397 aa		5.02	□□□□□ -1.61
SMARCB1-208	ENST00000634926	BNIP3	Q12983	259 aa		5.02	□□□□□ -1.61
SMARCB1-208	ENST00000634926	NUTM2G	Q5VZR2	741 aa		5.02	□□□□□ -1.61
SMARCB1-208	ENST00000634926	KRTAP5-3	Q6L8H2	238 aa		5.02	□□□□□ -1.61
SMARCB1-208	ENST00000634926	PAOX	Q6QHF9	649 aa		5.02	□□□□□ -1.61
SMARCB1-208	ENST00000634926	ZNF765	Q7L2R6	523 aa		5.02	□□□□□ -1.61
SMARCB1-208	ENST00000634926	VN1R5	Q7Z5H4	357 aa		5.02	□□□□□ -1.61
SMARCB1-208	ENST00000634926	AGBL5	Q8NDL9	886 aa		5.02	□□□□□ -1.61
SMARCB1-208	ENST00000634926	GLIS3	Q8NEA6	775 aa		5.02	□□□□□ -1.61
SMARCB1-208	ENST00000634926	PIK3R5	Q8WYR1	880 aa		5.02	□□□□□ -1.61
SMARCB1-208	ENST00000634926	EZH1	Q92800	747 aa	Predicted RBP	5.02	□□□□□ -1.61
SMARCB1-208	ENST00000634926	LRRC4C	Q9HCJ2	640 aa		5.02	□□□□□ -1.61
SMARCB1-208	ENST00000634926	DZANK1	Q9NVP4	752 aa		5.02	□□□□□ -1.61
SMARCB1-208	ENST00000634926	ADAMTS6	Q9UKP5	1117 aa		5.02	□□□□□ -1.61
SMARCB1-208	ENST00000634926	RAD21	O60216	631 aa		5.01	□□□□□ -1.61
SMARCB1-208	ENST00000634926	BRD2	P25440	801 aa	Known RBP	5.01	□□□□□ -1.61
SMARCB1-208	ENST00000634926	ZAP70	P43403	619 aa		5.01	□□□□□ -1.61
SMARCB1-208	ENST00000634926	C19orf57	Q0VDD7	668 aa		5.01	□□□□□ -1.61
SMARCB1-208	ENST00000634926	OCLN	Q16625	522 aa		5.01	□□□□□ -1.61
SMARCB1-208	ENST00000634926	METTL22	Q9BUU2	404 aa	Predicted RBP	5.01	□□□□□ -1.61
SMARCB1-208	ENST00000634926	DYNC1LI2	O43237	492 aa	Predicted RBP	5	□□□□□ -1.61
SMARCB1-208	ENST00000634926	FARP2	O94887	1054 aa	Predicted RBP	5	□□□□□ -1.61
SMARCB1-208	ENST00000634926	PLCL1	Q15111	1095 aa		5	□□□□□ -1.61
SMARCB1-208	ENST00000634926	C16orf46	Q6P387	395 aa		5	□□□□□ -1.61
SMARCB1-208	ENST00000634926	LCNL1	Q6ZST4	164 aa		5	□□□□□ -1.61
SMARCB1-208	ENST00000634926	C1QL4	Q86Z23	238 aa		5	□□□□□ -1.61
SMARCB1-208	ENST00000634926	FNBP4	Q8N3X1	1017 aa	Predicted RBP	5	□□□□□ -1.61
SMARCB1-208	ENST00000634926	C1orf127	Q8N9H9	656 aa		5	□□□□□ -1.61
SMARCB1-208	ENST00000634926	USP26	Q9BXU7	913 aa		5	□□□□□ -1.61
SMARCB1-208	ENST00000634926	VRTN	Q9H8Y1	702 aa		5	□□□□□ -1.61
SMARCB1-208	ENST00000634926	ELP3	Q9H9T3	547 aa		5	□□□□□ -1.61
SMARCB1-208	ENST00000634926	MBNL3	Q9NUK0	354 aa	Known RBP	5	□□□□□ -1.61
SMARCB1-208	ENST00000634926	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	5	□□□□□ -1.61
SMARCB1-208	ENST00000634926		U3KQE9	123 aa		5	□□□□□ -1.61
SMARCB1-208	ENST00000634926	PDE2A	O00408	941 aa	Predicted RBP	4.99	□□□□□ -1.61
SMARCB1-208	ENST00000634926	PRMT3	O60678	531 aa		4.99	□□□□□ -1.61
SMARCB1-208	ENST00000634926	CTSB	P07858	339 aa		4.99	□□□□□ -1.61
SMARCB1-208	ENST00000634926	NFIC	P08651	508 aa		4.99	□□□□□ -1.61
SMARCB1-208	ENST00000634926	LMOD1	P29536	600 aa	Predicted RBP	4.99	□□□□□ -1.61
SMARCB1-208	ENST00000634926	CD96	P40200	585 aa		4.99	□□□□□ -1.61
SMARCB1-208	ENST00000634926	USP11	P51784	963 aa		4.99	□□□□□ -1.61
SMARCB1-208	ENST00000634926	CABP4	P57796	275 aa		4.99	□□□□□ -1.61
SMARCB1-208	ENST00000634926	NAA30	Q147X3	362 aa	Predicted RBP	4.99	□□□□□ -1.61
SMARCB1-208	ENST00000634926	FAM168A	Q92567	244 aa		4.99	□□□□□ -1.61
SMARCB1-208	ENST00000634926	GTF3C3	Q9Y5Q9	886 aa		4.99	□□□□□ -1.61
SMARCB1-208	ENST00000634926	RNASE1	P07998	156 aa	Known RBP	4.98	□□□□□ -1.61
SMARCB1-208	ENST00000634926	UBTF	P17480	764 aa	Known RBP	4.98	□□□□□ -1.61
SMARCB1-208	ENST00000634926	SOX4	Q06945	474 aa	Predicted RBP	4.98	□□□□□ -1.61
SMARCB1-208	ENST00000634926	CDCA8	Q53HL2	280 aa		4.98	□□□□□ -1.61
SMARCB1-208	ENST00000634926	SEZ6L2	Q6UXD5	910 aa		4.98	□□□□□ -1.61
SMARCB1-208	ENST00000634926	NRSN2	Q9GZP1	204 aa		4.98	□□□□□ -1.61
SMARCB1-208	ENST00000634926	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	4.98	□□□□□ -1.61
SMARCB1-208	ENST00000634926	C1GALT1	Q9NS00	363 aa		4.98	□□□□□ -1.61
SMARCB1-208	ENST00000634926	ACTL7B	Q9Y614	415 aa		4.98	□□□□□ -1.61
SMARCB1-208	ENST00000634926		A6NHS1	94 aa		4.97	□□□□□ -1.61
SMARCB1-208	ENST00000634926	CFP	P27918	469 aa		4.97	□□□□□ -1.61
SMARCB1-208	ENST00000634926	FAM69C	Q0P6D2	419 aa		4.97	□□□□□ -1.61
SMARCB1-208	ENST00000634926	EXOSC6	Q5RKV6	272 aa	Known RBP	4.97	□□□□□ -1.61
SMARCB1-208	ENST00000634926	ERICH6	Q7L0X2	663 aa		4.97	□□□□□ -1.61
SMARCB1-208	ENST00000634926	ATG4D	Q86TL0	474 aa	Predicted RBP	4.97	□□□□□ -1.61
SMARCB1-208	ENST00000634926	ATCAY	Q86WG3	371 aa		4.97	□□□□□ -1.61
SMARCB1-208	ENST00000634926	NXPE3	Q969Y0	559 aa		4.97	□□□□□ -1.61
SMARCB1-208	ENST00000634926	CLUAP1	Q96AJ1	413 aa		4.97	□□□□□ -1.61
SMARCB1-208	ENST00000634926	MKNK1	Q9BUB5	465 aa		4.97	□□□□□ -1.61
SMARCB1-208	ENST00000634926	CHRD	Q9H2X0	955 aa		4.97	□□□□□ -1.61
SMARCB1-208	ENST00000634926	SEMA6C	Q9H3T2	930 aa		4.97	□□□□□ -1.61
SMARCB1-208	ENST00000634926	CYP4F12	Q9HCS2	524 aa		4.97	□□□□□ -1.61
SMARCB1-208	ENST00000634926	SLC5A6	Q9Y289	635 aa		4.97	□□□□□ -1.61
SMARCB1-208	ENST00000634926	NCAN	O14594	1321 aa		4.97	□□□□□ -1.61
SMARCB1-208	ENST00000634926	PRRG2	O14669	202 aa		4.96	□□□□□ -1.62

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