RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-223	ENST00000631247	ANKRD2	Q9GZV1	360 aa		13.19	□□□□□ -0.3
UBE3A-223	ENST00000631247	LEMD3	Q9Y2U8	911 aa		13.19	□□□□□ -0.3
UBE3A-223	ENST00000631247	CHMP3	Q9Y3E7	222 aa		13.19	□□□□□ -0.3
UBE3A-223	ENST00000631247	ASTN2	O75129	1339 aa	Predicted RBP	13.18	□□□□□ -0.3
UBE3A-223	ENST00000631247	MYO3B	Q8WXR4	1341 aa		13.18	□□□□□ -0.3
UBE3A-223	ENST00000631247	EXOSC9	Q06265	439 aa	Known RBP	13.18	□□□□□ -0.3
UBE3A-223	ENST00000631247	ABHD8	Q96I13	439 aa		13.18	□□□□□ -0.3
UBE3A-223	ENST00000631247	COA1	Q9GZY4	146 aa		13.18	□□□□□ -0.3
UBE3A-223	ENST00000631247	SCUBE2	Q9NQ36	999 aa		13.18	□□□□□ -0.3
UBE3A-223	ENST00000631247	COLQ	Q9Y215	455 aa	Predicted RBP	13.18	□□□□□ -0.3
UBE3A-223	ENST00000631247	PAPPA2	Q9BXP8	1791 aa		13.17	□□□□□ -0.3
UBE3A-223	ENST00000631247	ZNF804B	A4D1E1	1349 aa		13.17	□□□□□ -0.3
UBE3A-223	ENST00000631247	PITPNM2	Q9BZ72	1349 aa		13.17	□□□□□ -0.3
UBE3A-223	ENST00000631247	ANKRD18B	A2A2Z9	1011 aa		13.17	□□□□□ -0.3
UBE3A-223	ENST00000631247	PLA2G12B	Q9BX93	195 aa		13.17	□□□□□ -0.3
UBE3A-223	ENST00000631247	ZNF646	O15015	1829 aa	Predicted RBP	13.16	□□□□□ -0.3
UBE3A-223	ENST00000631247	WTIP	A6NIX2	430 aa	Predicted RBP	13.16	□□□□□ -0.3
UBE3A-223	ENST00000631247	VAMP4	O75379	141 aa		13.16	□□□□□ -0.3
UBE3A-223	ENST00000631247	TAF7L	Q5H9L4	462 aa		13.16	□□□□□ -0.3
UBE3A-223	ENST00000631247	DACT2	Q5SW24	774 aa		13.16	□□□□□ -0.3
UBE3A-223	ENST00000631247	STRIP1	Q5VSL9	837 aa		13.16	□□□□□ -0.3
UBE3A-223	ENST00000631247	FAM9B	Q8IZU0	186 aa		13.16	□□□□□ -0.3
UBE3A-223	ENST00000631247	GML	Q99445	158 aa		13.16	□□□□□ -0.3
UBE3A-223	ENST00000631247	AKAP11	Q9UKA4	1901 aa		13.15	□□□□□ -0.3
UBE3A-223	ENST00000631247		A0A1B0GUL6	1792 aa		13.15	□□□□□ -0.3
UBE3A-223	ENST00000631247	CCDC85C	A6NKD9	419 aa		13.15	□□□□□ -0.3
UBE3A-223	ENST00000631247	CASP7	P55210	303 aa		13.15	□□□□□ -0.3
UBE3A-223	ENST00000631247	IFIT5	Q13325	482 aa	Known RBP	13.15	□□□□□ -0.3
UBE3A-223	ENST00000631247	TTLL12	Q14166	644 aa	Predicted RBP	13.15	□□□□□ -0.3
UBE3A-223	ENST00000631247	MXD3	Q9BW11	206 aa		13.15	□□□□□ -0.3
UBE3A-223	ENST00000631247	HDAC9	Q9UKV0	1011 aa		13.15	□□□□□ -0.3
UBE3A-223	ENST00000631247	PCDHB8	Q9UN66	801 aa		13.15	□□□□□ -0.3
UBE3A-223	ENST00000631247	CASP8AP2	Q9UKL3	1982 aa		13.14	□□□□□ -0.31
UBE3A-223	ENST00000631247	FAM155A	B1AL88	458 aa	Predicted RBP	13.14	□□□□□ -0.31
UBE3A-223	ENST00000631247		F6X3S4	739 aa		13.14	□□□□□ -0.31
UBE3A-223	ENST00000631247	SASH1	O94885	1247 aa		13.14	□□□□□ -0.31
UBE3A-223	ENST00000631247	CSF1R	P07333	972 aa		13.14	□□□□□ -0.31
UBE3A-223	ENST00000631247	SLC10A3	P09131	477 aa		13.14	□□□□□ -0.31
UBE3A-223	ENST00000631247	NF2	P35240	595 aa		13.14	□□□□□ -0.31
UBE3A-223	ENST00000631247	FKBP1B	P68106	108 aa		13.14	□□□□□ -0.31
UBE3A-223	ENST00000631247	KIF23	Q02241	960 aa	Predicted RBP	13.14	□□□□□ -0.31
UBE3A-223	ENST00000631247	CHRND	Q07001	517 aa		13.14	□□□□□ -0.31
UBE3A-223	ENST00000631247	TTLL5	Q6EMB2	1281 aa		13.14	□□□□□ -0.31
UBE3A-223	ENST00000631247	SPOCK2	Q92563	424 aa		13.14	□□□□□ -0.31
UBE3A-223	ENST00000631247	ZIC5	Q96T25	663 aa		13.14	□□□□□ -0.31
UBE3A-223	ENST00000631247	KLRK1	P26718	216 aa		13.13	□□□□□ -0.31
UBE3A-223	ENST00000631247	MMP14	P50281	582 aa		13.13	□□□□□ -0.31
UBE3A-223	ENST00000631247	GTF2I	P78347	998 aa		13.13	□□□□□ -0.31
UBE3A-223	ENST00000631247	CCDC57	Q2TAC2	916 aa		13.13	□□□□□ -0.31
UBE3A-223	ENST00000631247	NBPF9	Q3BBW0	867 aa		13.13	□□□□□ -0.31
UBE3A-223	ENST00000631247	SLC4A10	Q6U841	1118 aa		13.13	□□□□□ -0.31
UBE3A-223	ENST00000631247	TXNRD3	Q86VQ6	643 aa		13.13	□□□□□ -0.31
UBE3A-223	ENST00000631247	KIAA0825	Q8IV33	1275 aa		13.13	□□□□□ -0.31
UBE3A-223	ENST00000631247	SAGE1	Q9NXZ1	904 aa		13.13	□□□□□ -0.31
UBE3A-223	ENST00000631247	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.13	□□□□□ -0.31
UBE3A-223	ENST00000631247	SCAF8	Q9UPN6	1271 aa	Known RBP	13.13	□□□□□ -0.31
UBE3A-223	ENST00000631247	GRM8	O00222	908 aa		13.12	□□□□□ -0.31
UBE3A-223	ENST00000631247	CHRM1	P11229	460 aa	Predicted RBP	13.12	□□□□□ -0.31
UBE3A-223	ENST00000631247	DGKZ	Q13574	1117 aa		13.12	□□□□□ -0.31
UBE3A-223	ENST00000631247	BEND3	Q5T5X7	828 aa		13.12	□□□□□ -0.31
UBE3A-223	ENST00000631247	ZNF804A	Q7Z570	1209 aa		13.12	□□□□□ -0.31
UBE3A-223	ENST00000631247	RASAL3	Q86YV0	1011 aa		13.12	□□□□□ -0.31
UBE3A-223	ENST00000631247	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.12	□□□□□ -0.31
UBE3A-223	ENST00000631247	CNNM1	Q9NRU3	951 aa		13.12	□□□□□ -0.31
UBE3A-223	ENST00000631247	WNT10B	O00744	389 aa		13.11	□□□□□ -0.31
UBE3A-223	ENST00000631247	TAF5L	O75529	589 aa		13.11	□□□□□ -0.31
UBE3A-223	ENST00000631247	TRPA1	O75762	1119 aa		13.11	□□□□□ -0.31
UBE3A-223	ENST00000631247	LMBR1L	Q6UX01	489 aa		13.11	□□□□□ -0.31
UBE3A-223	ENST00000631247	HELB	Q8NG08	1087 aa	Predicted RBP	13.11	□□□□□ -0.31
UBE3A-223	ENST00000631247	MCOLN1	Q9GZU1	580 aa		13.11	□□□□□ -0.31
UBE3A-223	ENST00000631247	UBE2Q2L	H0YL09	131 aa		13.1	□□□□□ -0.31
UBE3A-223	ENST00000631247	PLIN1	O60240	522 aa		13.1	□□□□□ -0.31
UBE3A-223	ENST00000631247	FOXO4	P98177	505 aa		13.1	□□□□□ -0.31
UBE3A-223	ENST00000631247	PRAMEF18	Q5VWM3	479 aa		13.1	□□□□□ -0.31
UBE3A-223	ENST00000631247	LDHAL6A	Q6ZMR3	332 aa		13.1	□□□□□ -0.31
UBE3A-223	ENST00000631247	SRCIN1	Q9C0H9	1055 aa		13.1	□□□□□ -0.31
UBE3A-223	ENST00000631247	CD209	Q9NNX6	404 aa		13.1	□□□□□ -0.31
UBE3A-223	ENST00000631247	ECM29	Q5VYK3	1845 aa		13.1	□□□□□ -0.31
UBE3A-223	ENST00000631247	COL1A1	P02452	1464 aa	Predicted RBP	13.1	□□□□□ -0.31
UBE3A-223	ENST00000631247	ALDH1L1	O75891	902 aa		13.09	□□□□□ -0.31
UBE3A-223	ENST00000631247	DLGAP5	Q15398	846 aa		13.09	□□□□□ -0.31
UBE3A-223	ENST00000631247	MOB2	Q70IA6	237 aa		13.09	□□□□□ -0.31
UBE3A-223	ENST00000631247	ZNF467	Q7Z7K2	595 aa	Predicted RBP	13.09	□□□□□ -0.31
UBE3A-223	ENST00000631247	CSRNP1	Q96S65	589 aa		13.09	□□□□□ -0.31
UBE3A-223	ENST00000631247	RNF186	Q9NXI6	227 aa		13.09	□□□□□ -0.31
UBE3A-223	ENST00000631247	TNRC18	O15417	2968 aa	Predicted RBP	13.08	□□□□□ -0.31
UBE3A-223	ENST00000631247		F8W031	263 aa	Predicted RBP	13.08	□□□□□ -0.32
UBE3A-223	ENST00000631247	SNAP23	O00161	211 aa		13.08	□□□□□ -0.32
UBE3A-223	ENST00000631247	MYO1B	O43795	1136 aa		13.08	□□□□□ -0.32
UBE3A-223	ENST00000631247	PRKG1	Q13976	671 aa		13.08	□□□□□ -0.32
UBE3A-223	ENST00000631247	ARMC9	Q7Z3E5	817 aa		13.08	□□□□□ -0.32
UBE3A-223	ENST00000631247	ZNF594	Q96JF6	807 aa	Predicted RBP	13.08	□□□□□ -0.32
UBE3A-223	ENST00000631247	PLCG2	P16885	1265 aa		13.07	□□□□□ -0.32
UBE3A-223	ENST00000631247	EPHA10	Q5JZY3	1008 aa		13.07	□□□□□ -0.32
UBE3A-223	ENST00000631247	C15orf52	Q6ZUT6	534 aa	Known RBP	13.07	□□□□□ -0.32
UBE3A-223	ENST00000631247	JAG2	Q9Y219	1238 aa		13.07	□□□□□ -0.32
UBE3A-223	ENST00000631247	ARAP2	Q8WZ64	1704 aa		13.06	□□□□□ -0.32
UBE3A-223	ENST00000631247	IL1R1	P14778	569 aa		13.06	□□□□□ -0.32
UBE3A-223	ENST00000631247	RBM5	P52756	815 aa	Known RBP eCLIP	13.06	□□□□□ -0.32
UBE3A-223	ENST00000631247	MLLT1	Q03111	559 aa	Predicted RBP	13.06	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms