RNA–Protein interactions for RNA: ENST00000628906.2

LINC00649-220, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 625 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-220ENST00000628906 GRAPQ13588 217 aa8.24□□□□□ -1.09
LINC00649-220ENST00000628906 ZNF34Q8IZ26 560 aa8.24□□□□□ -1.09
LINC00649-220ENST00000628906 GRAPLQ8TC17 118 aaPredicted RBP8.24□□□□□ -1.09
LINC00649-220ENST00000628906 EYA3Q99504 573 aa8.24□□□□□ -1.09
LINC00649-220ENST00000628906 ZCCHC17Q9NP64 241 aaKnown RBP8.24□□□□□ -1.09
LINC00649-220ENST00000628906 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.24□□□□□ -1.09
LINC00649-220ENST00000628906 MYPNQ86TC9 1320 aa8.24□□□□□ -1.09
LINC00649-220ENST00000628906 ADGRA2Q96PE1 1338 aa8.24□□□□□ -1.09
LINC00649-220ENST00000628906 C5orf42Q9H799 3197 aa8.23□□□□□ -1.09
LINC00649-220ENST00000628906 CCL15-CCL14A0A0B4J2E2 113 aa8.23□□□□□ -1.09
LINC00649-220ENST00000628906 C6orf229H3BNL8 230 aa8.23□□□□□ -1.09
LINC00649-220ENST00000628906 SMIM22K7EJ46 135 aa8.23□□□□□ -1.09
LINC00649-220ENST00000628906 USP2O75604 605 aaPredicted RBP8.23□□□□□ -1.09
LINC00649-220ENST00000628906 GTF2A2P52657 109 aa8.23□□□□□ -1.09
LINC00649-220ENST00000628906 CCL15Q16663 113 aa8.23□□□□□ -1.09
LINC00649-220ENST00000628906 DDX46Q7L014 1031 aaKnown RBP8.23□□□□□ -1.09
LINC00649-220ENST00000628906 APOBEC3FQ8IUX4 373 aaKnown RBP8.23□□□□□ -1.09
LINC00649-220ENST00000628906 ANKRD13AQ8IZ07 590 aa8.23□□□□□ -1.09
LINC00649-220ENST00000628906 PXYLP1Q8TE99 480 aa8.23□□□□□ -1.09
LINC00649-220ENST00000628906 NECAB3Q96P71 396 aaPredicted RBP8.23□□□□□ -1.09
LINC00649-220ENST00000628906 ZC3H12CQ9C0D7 883 aaKnown RBP8.23□□□□□ -1.09
LINC00649-220ENST00000628906 KCNQ3O43525 872 aa8.22□□□□□ -1.09
LINC00649-220ENST00000628906 ST18O60284 1047 aa8.22□□□□□ -1.09
LINC00649-220ENST00000628906 FMNL1O95466 1100 aaPredicted RBP8.22□□□□□ -1.09
LINC00649-220ENST00000628906 GPTP24298 496 aa8.22□□□□□ -1.09
LINC00649-220ENST00000628906 MMP14P50281 582 aa8.22□□□□□ -1.09
LINC00649-220ENST00000628906 TEFQ10587 303 aa8.22□□□□□ -1.09
LINC00649-220ENST00000628906 GRIN2CQ14957 1233 aa8.22□□□□□ -1.09
LINC00649-220ENST00000628906 MTHFSDQ2M296 383 aaKnown RBP8.22□□□□□ -1.09
LINC00649-220ENST00000628906 PPP1R42Q7Z4L9 355 aa8.22□□□□□ -1.09
LINC00649-220ENST00000628906 IL27Q8NEV9 243 aa8.22□□□□□ -1.09
LINC00649-220ENST00000628906 IL17REQ8NFR9 667 aa8.22□□□□□ -1.09
LINC00649-220ENST00000628906 TBC1D16Q8TBP0 767 aa8.22□□□□□ -1.09
LINC00649-220ENST00000628906 OPTNQ96CV9 577 aa8.22□□□□□ -1.09
LINC00649-220ENST00000628906 DEFB129Q9H1M3 183 aa8.22□□□□□ -1.09
LINC00649-220ENST00000628906 ATRXP46100 2492 aa8.22□□□□□ -1.09
LINC00649-220ENST00000628906 KMT2BQ9UMN6 2715 aaPredicted RBP8.22□□□□□ -1.09
LINC00649-220ENST00000628906 ADCY3O60266 1144 aa8.21□□□□□ -1.1
LINC00649-220ENST00000628906 INHAP05111 366 aa8.21□□□□□ -1.1
LINC00649-220ENST00000628906 SNRPA1P09661 255 aaKnown RBP8.21□□□□□ -1.1
LINC00649-220ENST00000628906 IREB2P48200 963 aaKnown RBP8.21□□□□□ -1.1
LINC00649-220ENST00000628906 PRKCZQ05513 592 aa8.21□□□□□ -1.1
LINC00649-220ENST00000628906 AKNAD1Q5T1N1 836 aa8.21□□□□□ -1.1
LINC00649-220ENST00000628906 OGFOD1Q8N543 542 aa8.21□□□□□ -1.1
LINC00649-220ENST00000628906 KCNH6Q9H252 994 aa8.21□□□□□ -1.1
LINC00649-220ENST00000628906 C11orf49Q9H6J7 331 aa8.21□□□□□ -1.1
LINC00649-220ENST00000628906 MAP3K15Q6ZN16 1313 aa8.21□□□□□ -1.1
LINC00649-220ENST00000628906 TCF20Q9UGU0 1960 aaKnown RBP8.21□□□□□ -1.1
LINC00649-220ENST00000628906 DDX60Q8IY21 1712 aaKnown RBP8.2□□□□□ -1.1
LINC00649-220ENST00000628906 COL1A1P02452 1464 aaPredicted RBP8.2□□□□□ -1.1
LINC00649-220ENST00000628906 ZFHX4Q86UP3 3567 aa8.2□□□□□ -1.1
LINC00649-220ENST00000628906 USP17L3A6NCW0 530 aa8.2□□□□□ -1.1
LINC00649-220ENST00000628906 USP17L4A6NCW7 530 aa8.2□□□□□ -1.1
LINC00649-220ENST00000628906 RGS20O76081 388 aa8.2□□□□□ -1.1
LINC00649-220ENST00000628906 GPSM2P81274 684 aa8.2□□□□□ -1.1
LINC00649-220ENST00000628906 SHHQ15465 462 aa8.2□□□□□ -1.1
LINC00649-220ENST00000628906 SUPT20HL1Q3ZLR7 823 aa8.2□□□□□ -1.1
LINC00649-220ENST00000628906 PARP10Q53GL7 1025 aa8.2□□□□□ -1.1
LINC00649-220ENST00000628906 USP17L1Q7RTZ2 530 aa8.2□□□□□ -1.1
LINC00649-220ENST00000628906 ZBED3Q96IU2 234 aaPredicted RBP8.2□□□□□ -1.1
LINC00649-220ENST00000628906 PTPRZ1P23471 2315 aaPredicted RBP8.2□□□□□ -1.1
LINC00649-220ENST00000628906 MYO9BQ13459 2157 aa8.2□□□□□ -1.1
LINC00649-220ENST00000628906 NUP98P52948 1817 aa8.19□□□□□ -1.1
LINC00649-220ENST00000628906 PRR33A8MZF0 331 aa8.19□□□□□ -1.1
LINC00649-220ENST00000628906 BTBD19C9JJ37 291 aa8.19□□□□□ -1.1
LINC00649-220ENST00000628906 IL13P35225 146 aa8.19□□□□□ -1.1
LINC00649-220ENST00000628906 POTEEQ6S8J3 1075 aa8.19□□□□□ -1.1
LINC00649-220ENST00000628906 MTMR14Q8NCE2 650 aa8.19□□□□□ -1.1
LINC00649-220ENST00000628906 LBHD1Q9BQE6 289 aaPredicted RBP8.19□□□□□ -1.1
LINC00649-220ENST00000628906 ELP3Q9H9T3 547 aa8.19□□□□□ -1.1
LINC00649-220ENST00000628906 GABRQQ9UN88 632 aa8.19□□□□□ -1.1
LINC00649-220ENST00000628906 PPP2R3BQ9Y5P8 575 aa8.19□□□□□ -1.1
LINC00649-220ENST00000628906 LRRC37AA6NMS7 1700 aa8.19□□□□□ -1.1
LINC00649-220ENST00000628906 PFASO15067 1338 aa8.19□□□□□ -1.1
LINC00649-220ENST00000628906 CHD6Q8TD26 2715 aa8.19□□□□□ -1.1
LINC00649-220ENST00000628906 REV3LO60673 3130 aa8.18□□□□□ -1.1
LINC00649-220ENST00000628906 G3V3G9 751 aa8.18□□□□□ -1.1
LINC00649-220ENST00000628906 COL6A1P12109 1028 aa8.18□□□□□ -1.1
LINC00649-220ENST00000628906 ELNP15502 786 aa8.18□□□□□ -1.1
LINC00649-220ENST00000628906 IRF5Q13568 498 aa8.18□□□□□ -1.1
LINC00649-220ENST00000628906 DCAF8Q5TAQ9 597 aa8.18□□□□□ -1.1
LINC00649-220ENST00000628906 GIGYF2Q6Y7W6 1299 aaKnown RBP8.18□□□□□ -1.1
LINC00649-220ENST00000628906 PODNQ7Z5L7 613 aa8.18□□□□□ -1.1
LINC00649-220ENST00000628906 PPM1EQ8WY54 764 aa8.18□□□□□ -1.1
LINC00649-220ENST00000628906 FBXL18Q96ME1 805 aa8.18□□□□□ -1.1
LINC00649-220ENST00000628906 UTP14AQ9BVJ6 771 aaKnown RBP8.18□□□□□ -1.1
LINC00649-220ENST00000628906 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.18□□□□□ -1.1
LINC00649-220ENST00000628906 IGSF5Q9NSI5 407 aa8.18□□□□□ -1.1
LINC00649-220ENST00000628906 PODXL2Q9NZ53 605 aa8.18□□□□□ -1.1
LINC00649-220ENST00000628906 CXXC1Q9P0U4 656 aaPredicted RBP8.18□□□□□ -1.1
LINC00649-220ENST00000628906 CPA4Q9UI42 421 aa8.18□□□□□ -1.1
LINC00649-220ENST00000628906 OGDHLQ9ULD0 1010 aa8.18□□□□□ -1.1
LINC00649-220ENST00000628906 ZFHX2Q9C0A1 2572 aaPredicted RBP8.18□□□□□ -1.1
LINC00649-220ENST00000628906 ANKRD36CQ5JPF3 1778 aa8.17□□□□□ -1.1
LINC00649-220ENST00000628906 PSME4Q14997 1843 aa8.17□□□□□ -1.1
LINC00649-220ENST00000628906 CHD9Q3L8U1 2897 aa8.17□□□□□ -1.1
LINC00649-220ENST00000628906 DCHS1Q96JQ0 3298 aa8.17□□□□□ -1.1
LINC00649-220ENST00000628906 FAM86C2PA6NEL3 165 aa8.17□□□□□ -1.1
LINC00649-220ENST00000628906 BTBD11A6QL63 1104 aa8.17□□□□□ -1.1
LINC00649-220ENST00000628906 PI4K2BG5E9Z4 385 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms