RNA–Protein interactions for RNA: ENST00000628496.2

SOX2-OT-248, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 801 nt, Biotype sense overlapping.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-248ENST00000628496 IQSEC3Q9UPP2 1182 aaPredicted RBP16.82■□□□□ 0.28
SOX2-OT-248ENST00000628496 NOP58Q9Y2X3 529 aaKnown RBP16.82■□□□□ 0.28
SOX2-OT-248ENST00000628496 MYO3BQ8WXR4 1341 aa16.81■□□□□ 0.28
SOX2-OT-248ENST00000628496 ADORA1P30542 326 aa16.81■□□□□ 0.28
SOX2-OT-248ENST00000628496 ZNF280AP59817 542 aaPredicted RBP16.81■□□□□ 0.28
SOX2-OT-248ENST00000628496 RPAP2Q8IXW5 612 aaPredicted RBP16.81■□□□□ 0.28
SOX2-OT-248ENST00000628496 CLEC11AQ9Y240 323 aa16.81■□□□□ 0.28
SOX2-OT-248ENST00000628496 PSME4Q14997 1843 aa16.81■□□□□ 0.28
SOX2-OT-248ENST00000628496 FAM205AQ6ZU69 1335 aa16.8■□□□□ 0.28
SOX2-OT-248ENST00000628496 A0A1B0GUL7 405 aa16.8■□□□□ 0.28
SOX2-OT-248ENST00000628496 USP17L8P0C7I0 530 aa16.8■□□□□ 0.28
SOX2-OT-248ENST00000628496 TIMM10P62072 90 aa16.8■□□□□ 0.28
SOX2-OT-248ENST00000628496 TBC1D10BQ4KMP7 808 aaPredicted RBP16.8■□□□□ 0.28
SOX2-OT-248ENST00000628496 MAP1SQ66K74 1059 aaPredicted RBP16.8■□□□□ 0.28
SOX2-OT-248ENST00000628496 OS9Q13438 667 aaPredicted RBP16.79■□□□□ 0.28
SOX2-OT-248ENST00000628496 KIAA0825Q8IV33 1275 aa16.79■□□□□ 0.28
SOX2-OT-248ENST00000628496 EXOC6BQ9Y2D4 811 aa16.79■□□□□ 0.28
SOX2-OT-248ENST00000628496 AKAP2Q9Y2D5 859 aa16.79■□□□□ 0.28
SOX2-OT-248ENST00000628496 COL1A1P02452 1464 aaPredicted RBP16.79■□□□□ 0.28
SOX2-OT-248ENST00000628496 PHKA1P46020 1223 aa16.78■□□□□ 0.28
SOX2-OT-248ENST00000628496 FKBP1AP62942 108 aaKnown RBP16.78■□□□□ 0.28
SOX2-OT-248ENST00000628496 CHAF1AQ13111 956 aaPredicted RBP16.78■□□□□ 0.28
SOX2-OT-248ENST00000628496 KIF4BQ2VIQ3 1234 aa16.78■□□□□ 0.28
SOX2-OT-248ENST00000628496 RBM26Q5T8P6 1007 aaKnown RBP16.78■□□□□ 0.28
SOX2-OT-248ENST00000628496 CRBNQ96SW2 442 aa16.78■□□□□ 0.28
SOX2-OT-248ENST00000628496 MYOZ2Q9NPC6 264 aa16.78■□□□□ 0.28
SOX2-OT-248ENST00000628496 FRAT2O75474 233 aaPredicted RBP16.77■□□□□ 0.28
SOX2-OT-248ENST00000628496 ITGBL1O95965 494 aaPredicted RBP16.77■□□□□ 0.28
SOX2-OT-248ENST00000628496 HSPA6P17066 643 aa16.77■□□□□ 0.28
SOX2-OT-248ENST00000628496 MFSD14BQ5SR56 506 aa16.77■□□□□ 0.28
SOX2-OT-248ENST00000628496 CCDC102BQ68D86 513 aa16.77■□□□□ 0.28
SOX2-OT-248ENST00000628496 XAGE2Q96GT9 111 aa16.77■□□□□ 0.28
SOX2-OT-248ENST00000628496 PGAP2Q9UHJ9 254 aa16.77■□□□□ 0.28
SOX2-OT-248ENST00000628496 ARAP2Q8WZ64 1704 aa16.76■□□□□ 0.27
SOX2-OT-248ENST00000628496 ASTN2O75129 1339 aaPredicted RBP16.76■□□□□ 0.27
SOX2-OT-248ENST00000628496 HMMRO75330 724 aa16.76■□□□□ 0.27
SOX2-OT-248ENST00000628496 GRIK5Q16478 980 aa16.76■□□□□ 0.27
SOX2-OT-248ENST00000628496 CNTROBQ8N137 903 aa16.76■□□□□ 0.27
SOX2-OT-248ENST00000628496 ZC3H15Q8WU90 426 aaKnown RBP16.76■□□□□ 0.27
SOX2-OT-248ENST00000628496 NEUROD6Q96NK8 337 aa16.76■□□□□ 0.27
SOX2-OT-248ENST00000628496 GPR108Q9NPR9 543 aa16.76■□□□□ 0.27
SOX2-OT-248ENST00000628496 PASKQ96RG2 1323 aa16.75■□□□□ 0.27
SOX2-OT-248ENST00000628496 F8W031 263 aaPredicted RBP16.75■□□□□ 0.27
SOX2-OT-248ENST00000628496 TNNI3KQ59H18 835 aa16.75■□□□□ 0.27
SOX2-OT-248ENST00000628496 OGFOD1Q8N543 542 aa16.75■□□□□ 0.27
SOX2-OT-248ENST00000628496 SUPT16HQ9Y5B9 1047 aaKnown RBP16.75■□□□□ 0.27
SOX2-OT-248ENST00000628496 FPGT-TNNI3KV9GXZ4 949 aa16.75■□□□□ 0.27
SOX2-OT-248ENST00000628496 SCARF1Q14162 830 aa16.74■□□□□ 0.27
SOX2-OT-248ENST00000628496 GNL3LQ9NVN8 582 aaKnown RBP16.74■□□□□ 0.27
SOX2-OT-248ENST00000628496 HDAC9Q9UKV0 1011 aa16.74■□□□□ 0.27
SOX2-OT-248ENST00000628496 WNT10BO00744 389 aa16.73■□□□□ 0.27
SOX2-OT-248ENST00000628496 MMP14P50281 582 aa16.73■□□□□ 0.27
SOX2-OT-248ENST00000628496 FMR1Q06787 632 aaKnown RBP eCLIP16.73■□□□□ 0.27
SOX2-OT-248ENST00000628496 RASGRF1Q13972 1273 aa16.73■□□□□ 0.27
SOX2-OT-248ENST00000628496 NBPF9Q3BBW0 867 aa16.73■□□□□ 0.27
SOX2-OT-248ENST00000628496 HSP90AB4PQ58FF6 505 aa16.73■□□□□ 0.27
SOX2-OT-248ENST00000628496 ERC1Q8IUD2 1116 aa16.73■□□□□ 0.27
SOX2-OT-248ENST00000628496 RHPN1Q8TCX5 695 aa16.73■□□□□ 0.27
SOX2-OT-248ENST00000628496 TBC1D22AQ8WUA7 517 aa16.73■□□□□ 0.27
SOX2-OT-248ENST00000628496 EAF2Q96CJ1 260 aaPredicted RBP16.73■□□□□ 0.27
SOX2-OT-248ENST00000628496 ZBED3Q96IU2 234 aaPredicted RBP16.73■□□□□ 0.27
SOX2-OT-248ENST00000628496 GLIS2Q9BZE0 524 aaPredicted RBP16.73■□□□□ 0.27
SOX2-OT-248ENST00000628496 GGA3Q9NZ52 723 aa16.73■□□□□ 0.27
SOX2-OT-248ENST00000628496 PCDHB15Q9Y5E8 787 aa16.73■□□□□ 0.27
SOX2-OT-248ENST00000628496 TRAF5O00463 557 aa16.72■□□□□ 0.27
SOX2-OT-248ENST00000628496 SEMA3EO15041 775 aa16.72■□□□□ 0.27
SOX2-OT-248ENST00000628496 APLP1P51693 650 aa16.72■□□□□ 0.27
SOX2-OT-248ENST00000628496 DBNDD2Q9BQY9 259 aa16.72■□□□□ 0.27
SOX2-OT-248ENST00000628496 TLR7Q9NYK1 1049 aaKnown RBP16.72■□□□□ 0.27
SOX2-OT-248ENST00000628496 DENND2AQ9ULE3 1009 aa16.72■□□□□ 0.27
SOX2-OT-248ENST00000628496 TTF2Q9UNY4 1162 aaKnown RBP16.72■□□□□ 0.27
SOX2-OT-248ENST00000628496 PCDHAC2Q9Y5I4 1007 aa16.72■□□□□ 0.27
SOX2-OT-248ENST00000628496 APBB1O00213 710 aa16.71■□□□□ 0.27
SOX2-OT-248ENST00000628496 HTRA3P83110 453 aa16.71■□□□□ 0.27
SOX2-OT-248ENST00000628496 GORABQ5T7V8 394 aa16.71■□□□□ 0.27
SOX2-OT-248ENST00000628496 ANGEL2Q5VTE6 544 aaKnown RBP16.71■□□□□ 0.27
SOX2-OT-248ENST00000628496 WDR66Q8TBY9 1149 aa16.71■□□□□ 0.27
SOX2-OT-248ENST00000628496 IL1RAPL2Q9NP60 686 aa16.71■□□□□ 0.27
SOX2-OT-248ENST00000628496 DBNLQ9UJU6 430 aaKnown RBP16.71■□□□□ 0.27
SOX2-OT-248ENST00000628496 PDS5AQ29RF7 1337 aaKnown RBP16.7■□□□□ 0.26
SOX2-OT-248ENST00000628496 ADM5C9JUS6 153 aa16.7■□□□□ 0.26
SOX2-OT-248ENST00000628496 MYCNP04198 464 aaPredicted RBP16.7■□□□□ 0.26
SOX2-OT-248ENST00000628496 ARID4AP29374 1257 aaPredicted RBP16.7■□□□□ 0.26
SOX2-OT-248ENST00000628496 CFAP100Q494V2 611 aa16.7■□□□□ 0.26
SOX2-OT-248ENST00000628496 PI16Q6UXB8 463 aa16.7■□□□□ 0.26
SOX2-OT-248ENST00000628496 DLK2Q6UY11 383 aa16.7■□□□□ 0.26
SOX2-OT-248ENST00000628496 USP48Q86UV5 1035 aa16.7■□□□□ 0.26
SOX2-OT-248ENST00000628496 MTMR14Q8NCE2 650 aa16.7■□□□□ 0.26
SOX2-OT-248ENST00000628496 DCPSQ96C86 337 aaKnown RBP16.7■□□□□ 0.26
SOX2-OT-248ENST00000628496 KIF1BPQ96EK5 621 aa16.7■□□□□ 0.26
SOX2-OT-248ENST00000628496 CCDC8Q9H0W5 538 aaPredicted RBP16.7■□□□□ 0.26
SOX2-OT-248ENST00000628496 AOX1Q06278 1338 aa16.7■□□□□ 0.26
SOX2-OT-248ENST00000628496 SALL1Q9NSC2 1324 aa16.7■□□□□ 0.26
SOX2-OT-248ENST00000628496 SPDYE2BA6NHP3 402 aa16.69■□□□□ 0.26
SOX2-OT-248ENST00000628496 RAB11FIP3O75154 756 aa16.69■□□□□ 0.26
SOX2-OT-248ENST00000628496 SPDYE6P0CI01 402 aa16.69■□□□□ 0.26
SOX2-OT-248ENST00000628496 DLGAP5Q15398 846 aa16.69■□□□□ 0.26
SOX2-OT-248ENST00000628496 CDC37L1Q7L3B6 337 aa16.69■□□□□ 0.26
SOX2-OT-248ENST00000628496 KRT26Q7Z3Y9 468 aa16.69■□□□□ 0.26
SOX2-OT-248ENST00000628496 AACSQ86V21 672 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms