RNA–Protein interactions for RNA: ENST00000628176.2

MECP2-217, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3 BASIC

Gene MECP2, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-217ENST00000628176 NFKBIEO00221 500 aa17■□□□□ 0.31
MECP2-217ENST00000628176 CHMLP26374 656 aa17■□□□□ 0.31
MECP2-217ENST00000628176 HS1BP3Q53T59 392 aa17■□□□□ 0.31
MECP2-217ENST00000628176 CCDC93Q567U6 631 aa17■□□□□ 0.31
MECP2-217ENST00000628176 DBNDD2Q9BQY9 259 aa17■□□□□ 0.31
MECP2-217ENST00000628176 ZNF277Q9NRM2 450 aaPredicted RBP17■□□□□ 0.31
MECP2-217ENST00000628176 AKAP2Q9Y2D5 859 aa17■□□□□ 0.31
MECP2-217ENST00000628176 GYG1P46976 350 aa16.99■□□□□ 0.31
MECP2-217ENST00000628176 PRELPP51888 382 aa16.99■□□□□ 0.31
MECP2-217ENST00000628176 PUM3Q15397 648 aaKnown RBP16.99■□□□□ 0.31
MECP2-217ENST00000628176 TRIM44Q96DX7 344 aaPredicted RBP16.99■□□□□ 0.31
MECP2-217ENST00000628176 TMX4Q9H1E5 349 aaPredicted RBP16.99■□□□□ 0.31
MECP2-217ENST00000628176 GPR108Q9NPR9 543 aa16.99■□□□□ 0.31
MECP2-217ENST00000628176 PODXL2Q9NZ53 605 aa16.99■□□□□ 0.31
MECP2-217ENST00000628176 DBNLQ9UJU6 430 aaKnown RBP16.99■□□□□ 0.31
MECP2-217ENST00000628176 ZNF609O15014 1411 aa16.99■□□□□ 0.31
MECP2-217ENST00000628176 NASPP49321 788 aaPredicted RBP16.99■□□□□ 0.31
MECP2-217ENST00000628176 GPR162Q16538 588 aa16.99■□□□□ 0.31
MECP2-217ENST00000628176 ARHGAP27Q6ZUM4 889 aa16.99■□□□□ 0.31
MECP2-217ENST00000628176 ANP32BQ92688 251 aaKnown RBP16.99■□□□□ 0.31
MECP2-217ENST00000628176 XAGE2Q96GT9 111 aa16.99■□□□□ 0.31
MECP2-217ENST00000628176 ZDHHC9Q9Y397 364 aa16.99■□□□□ 0.31
MECP2-217ENST00000628176 IFIT2P09913 472 aaKnown RBP16.98■□□□□ 0.31
MECP2-217ENST00000628176 BCAMP50895 628 aa16.98■□□□□ 0.31
MECP2-217ENST00000628176 MCTP1Q6DN14 999 aa16.98■□□□□ 0.31
MECP2-217ENST00000628176 IQSEC3Q9UPP2 1182 aaPredicted RBP16.98■□□□□ 0.31
MECP2-217ENST00000628176 CHD4Q14839 1912 aa16.98■□□□□ 0.31
MECP2-217ENST00000628176 IRS2Q9Y4H2 1338 aa16.98■□□□□ 0.31
MECP2-217ENST00000628176 MBD3O95983 291 aa16.97■□□□□ 0.31
MECP2-217ENST00000628176 ATP2B4P23634 1241 aa16.97■□□□□ 0.31
MECP2-217ENST00000628176 UBE4AQ14139 1066 aa16.97■□□□□ 0.31
MECP2-217ENST00000628176 AOC3Q16853 763 aa16.97■□□□□ 0.31
MECP2-217ENST00000628176 DOK7Q18PE1 504 aa16.97■□□□□ 0.31
MECP2-217ENST00000628176 LPIN2Q92539 896 aa16.97■□□□□ 0.31
MECP2-217ENST00000628176 TMX3Q96JJ7 454 aa16.97■□□□□ 0.31
MECP2-217ENST00000628176 LEMD3Q9Y2U8 911 aa16.97■□□□□ 0.31
MECP2-217ENST00000628176 BRD1O95696 1058 aa16.96■□□□□ 0.31
MECP2-217ENST00000628176 COL4A5P29400 1685 aa16.96■□□□□ 0.31
MECP2-217ENST00000628176 ZSCAN23Q3MJ62 389 aa16.96■□□□□ 0.31
MECP2-217ENST00000628176 RTKN2Q8IZC4 609 aa16.96■□□□□ 0.31
MECP2-217ENST00000628176 ZGPATQ8N5A5 531 aaKnown RBP16.96■□□□□ 0.31
MECP2-217ENST00000628176 GPATCH3Q96I76 525 aa16.96■□□□□ 0.31
MECP2-217ENST00000628176 FAM84BQ96KN1 310 aaPredicted RBP16.96■□□□□ 0.31
MECP2-217ENST00000628176 SLC5A1P13866 664 aa16.96■□□□□ 0.3
MECP2-217ENST00000628176 PHKA1P46020 1223 aa16.96■□□□□ 0.3
MECP2-217ENST00000628176 NEK4P51957 841 aa16.96■□□□□ 0.3
MECP2-217ENST00000628176 WASHC4Q2M389 1173 aa16.96■□□□□ 0.3
MECP2-217ENST00000628176 CC2D2BQ6DHV5 1058 aa16.96■□□□□ 0.3
MECP2-217ENST00000628176 RTFDC1Q9BY42 306 aaPredicted RBP16.96■□□□□ 0.3
MECP2-217ENST00000628176 JAG2Q9Y219 1238 aa16.96■□□□□ 0.3
MECP2-217ENST00000628176 NDUFB9Q9Y6M9 179 aa16.96■□□□□ 0.3
MECP2-217ENST00000628176 FKBP4Q02790 459 aaKnown RBP eCLIP16.95■□□□□ 0.3
MECP2-217ENST00000628176 TAOK3Q9H2K8 898 aa16.95■□□□□ 0.3
MECP2-217ENST00000628176 DBNDD1Q9H9R9 158 aa16.95■□□□□ 0.3
MECP2-217ENST00000628176 KCNQ5Q9NR82 932 aa16.95■□□□□ 0.3
MECP2-217ENST00000628176 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.95■□□□□ 0.3
MECP2-217ENST00000628176 TTC41PQ6P2S7 1318 aa16.94■□□□□ 0.3
MECP2-217ENST00000628176 ARAP2Q8WZ64 1704 aa16.94■□□□□ 0.3
MECP2-217ENST00000628176 IFIT1P09914 478 aaKnown RBP16.94■□□□□ 0.3
MECP2-217ENST00000628176 PKP1Q13835 747 aa16.94■□□□□ 0.3
MECP2-217ENST00000628176 SBF1O95248 1867 aa16.94■□□□□ 0.3
MECP2-217ENST00000628176 PPIP5K2O43314 1243 aa16.93■□□□□ 0.3
MECP2-217ENST00000628176 HSPA4P34932 840 aa16.93■□□□□ 0.3
MECP2-217ENST00000628176 SCARF1Q14162 830 aa16.93■□□□□ 0.3
MECP2-217ENST00000628176 GORABQ5T7V8 394 aa16.93■□□□□ 0.3
MECP2-217ENST00000628176 SOGA3Q5TF21 947 aa16.93■□□□□ 0.3
MECP2-217ENST00000628176 PI16Q6UXB8 463 aa16.93■□□□□ 0.3
MECP2-217ENST00000628176 PSMD1Q99460 953 aa16.93■□□□□ 0.3
MECP2-217ENST00000628176 ZC3H12CQ9C0D7 883 aaKnown RBP16.93■□□□□ 0.3
MECP2-217ENST00000628176 CCDC102BQ68D86 513 aa16.93■□□□□ 0.3
MECP2-217ENST00000628176 PDLIM2Q96JY6 352 aa16.93■□□□□ 0.3
MECP2-217ENST00000628176 SNRKQ9NRH2 765 aa16.93■□□□□ 0.3
MECP2-217ENST00000628176 SCN9AQ15858 1988 aa16.92■□□□□ 0.3
MECP2-217ENST00000628176 FBXO33Q7Z6M2 555 aa16.92■□□□□ 0.3
MECP2-217ENST00000628176 ZSCAN30Q86W11 494 aa16.92■□□□□ 0.3
MECP2-217ENST00000628176 ECHDC1Q9NTX5 307 aa16.92■□□□□ 0.3
MECP2-217ENST00000628176 MED23Q9ULK4 1368 aa16.92■□□□□ 0.3
MECP2-217ENST00000628176 HIBADHP31937 336 aaKnown RBP16.91■□□□□ 0.3
MECP2-217ENST00000628176 KIAA2012Q0VF49 1180 aa16.91■□□□□ 0.3
MECP2-217ENST00000628176 CAVIN1Q6NZI2 390 aaKnown RBP16.91■□□□□ 0.3
MECP2-217ENST00000628176 VPS37DQ86XT2 251 aa16.91■□□□□ 0.3
MECP2-217ENST00000628176 LARGE2Q8N3Y3 721 aa16.91■□□□□ 0.3
MECP2-217ENST00000628176 GPT2Q8TD30 523 aa16.91■□□□□ 0.3
MECP2-217ENST00000628176 AK9Q5TCS8 1911 aa16.91■□□□□ 0.3
MECP2-217ENST00000628176 AKAP11Q9UKA4 1901 aa16.9■□□□□ 0.3
MECP2-217ENST00000628176 PRPF40AO75400 957 aaKnown RBP16.9■□□□□ 0.3
MECP2-217ENST00000628176 MAP4K4O95819 1239 aaPredicted RBP16.9■□□□□ 0.3
MECP2-217ENST00000628176 IARSP41252 1262 aaKnown RBP16.9■□□□□ 0.3
MECP2-217ENST00000628176 EYA3Q99504 573 aa16.9■□□□□ 0.3
MECP2-217ENST00000628176 ANO2Q9NQ90 1003 aa16.9■□□□□ 0.3
MECP2-217ENST00000628176 MYO5AQ9Y4I1 1855 aaKnown RBP16.9■□□□□ 0.3
MECP2-217ENST00000628176 TRIM6-TRIM34B2RNG4 842 aa16.9■□□□□ 0.3
MECP2-217ENST00000628176 GLRX3O76003 335 aaKnown RBP16.9■□□□□ 0.3
MECP2-217ENST00000628176 CAVIN4Q5BKX8 364 aa16.9■□□□□ 0.3
MECP2-217ENST00000628176 CCDC158Q5M9N0 1113 aa16.9■□□□□ 0.3
MECP2-217ENST00000628176 TTC39AQ5SRH9 613 aa16.9■□□□□ 0.3
MECP2-217ENST00000628176 LRSAM1Q6UWE0 723 aa16.9■□□□□ 0.3
MECP2-217ENST00000628176 PI4K2BQ8TCG2 481 aa16.9■□□□□ 0.3
MECP2-217ENST00000628176 EDC3Q96F86 508 aaKnown RBP16.9■□□□□ 0.3
MECP2-217ENST00000628176 BOLA2Q9H3K6 86 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms