RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 VGLL2Q8N8G2 317 aa18.17■□□□□ 0.5
PNKP-221ENST00000627317 MXD3Q9BW11 206 aa18.17■□□□□ 0.5
PNKP-221ENST00000627317 GLIS2Q9BZE0 524 aaPredicted RBP18.17■□□□□ 0.5
PNKP-221ENST00000627317 EXOC6BQ9Y2D4 811 aa18.17■□□□□ 0.5
PNKP-221ENST00000627317 RASSF10A6NK89 507 aa18.16■□□□□ 0.5
PNKP-221ENST00000627317 UBE4AQ14139 1066 aa18.16■□□□□ 0.5
PNKP-221ENST00000627317 KIF4BQ2VIQ3 1234 aa18.16■□□□□ 0.5
PNKP-221ENST00000627317 ERC1Q8IUD2 1116 aa18.16■□□□□ 0.5
PNKP-221ENST00000627317 CD209Q9NNX6 404 aa18.16■□□□□ 0.5
PNKP-221ENST00000627317 USP17L8P0C7I0 530 aa18.15■□□□□ 0.5
PNKP-221ENST00000627317 IL1R1P14778 569 aa18.15■□□□□ 0.5
PNKP-221ENST00000627317 TFCP2Q12800 502 aa18.15■□□□□ 0.5
PNKP-221ENST00000627317 ATP2B3Q16720 1220 aa18.15■□□□□ 0.5
PNKP-221ENST00000627317 MKRN1Q9UHC7 482 aaKnown RBP18.15■□□□□ 0.5
PNKP-221ENST00000627317 ASTN2O75129 1339 aaPredicted RBP18.15■□□□□ 0.5
PNKP-221ENST00000627317 IFIT1P09914 478 aaKnown RBP18.14■□□□□ 0.49
PNKP-221ENST00000627317 SLC5A1P13866 664 aa18.14■□□□□ 0.49
PNKP-221ENST00000627317 AKAP2Q9Y2D5 859 aa18.14■□□□□ 0.49
PNKP-221ENST00000627317 MYO3BQ8WXR4 1341 aa18.14■□□□□ 0.49
PNKP-221ENST00000627317 THSD7BQ9C0I4 1608 aa18.13■□□□□ 0.49
PNKP-221ENST00000627317 APBB1O00213 710 aa18.13■□□□□ 0.49
PNKP-221ENST00000627317 RAB11FIP3O75154 756 aa18.13■□□□□ 0.49
PNKP-221ENST00000627317 SASH1O94885 1247 aa18.13■□□□□ 0.49
PNKP-221ENST00000627317 CDC37L1Q7L3B6 337 aa18.13■□□□□ 0.49
PNKP-221ENST00000627317 CERS5Q8N5B7 392 aa18.13■□□□□ 0.49
PNKP-221ENST00000627317 LPIN2Q92539 896 aa18.13■□□□□ 0.49
PNKP-221ENST00000627317 MYOZ2Q9NPC6 264 aa18.13■□□□□ 0.49
PNKP-221ENST00000627317 FGFR2P21802 821 aa18.12■□□□□ 0.49
PNKP-221ENST00000627317 HDAC1Q13547 482 aaPredicted RBP18.12■□□□□ 0.49
PNKP-221ENST00000627317 TTLL5Q6EMB2 1281 aa18.12■□□□□ 0.49
PNKP-221ENST00000627317 DLK2Q6UY11 383 aa18.12■□□□□ 0.49
PNKP-221ENST00000627317 ZNF804AQ7Z570 1209 aa18.12■□□□□ 0.49
PNKP-221ENST00000627317 KIF1BPQ96EK5 621 aa18.12■□□□□ 0.49
PNKP-221ENST00000627317 RWDD1Q9H446 243 aaPredicted RBP18.12■□□□□ 0.49
PNKP-221ENST00000627317 GGA3Q9NZ52 723 aa18.12■□□□□ 0.49
PNKP-221ENST00000627317 VEGFBP49765 207 aa18.11■□□□□ 0.49
PNKP-221ENST00000627317 GTF2IP78347 998 aa18.11■□□□□ 0.49
PNKP-221ENST00000627317 RBM26Q5T8P6 1007 aaKnown RBP18.11■□□□□ 0.49
PNKP-221ENST00000627317 KRT26Q7Z3Y9 468 aa18.11■□□□□ 0.49
PNKP-221ENST00000627317 ZBED3Q96IU2 234 aaPredicted RBP18.11■□□□□ 0.49
PNKP-221ENST00000627317 TLL2Q9Y6L7 1015 aa18.11■□□□□ 0.49
PNKP-221ENST00000627317 TRPM7Q96QT4 1865 aa18.11■□□□□ 0.49
PNKP-221ENST00000627317 ARAP2Q8WZ64 1704 aa18.1■□□□□ 0.49
PNKP-221ENST00000627317 A0A1B0GUL7 405 aa18.1■□□□□ 0.49
PNKP-221ENST00000627317 ADM5C9JUS6 153 aa18.1■□□□□ 0.49
PNKP-221ENST00000627317 SCARF1Q14162 830 aa18.1■□□□□ 0.49
PNKP-221ENST00000627317 CAVIN4Q5BKX8 364 aa18.1■□□□□ 0.49
PNKP-221ENST00000627317 USP48Q86UV5 1035 aa18.1■□□□□ 0.49
PNKP-221ENST00000627317 VPS37DQ86XT2 251 aa18.1■□□□□ 0.49
PNKP-221ENST00000627317 TDRD7Q8NHU6 1098 aaKnown RBP18.1■□□□□ 0.49
PNKP-221ENST00000627317 RHPN1Q8TCX5 695 aa18.1■□□□□ 0.49
PNKP-221ENST00000627317 FAM84BQ96KN1 310 aaPredicted RBP18.1■□□□□ 0.49
PNKP-221ENST00000627317 DCTPP1Q9H773 170 aa18.1■□□□□ 0.49
PNKP-221ENST00000627317 GPR108Q9NPR9 543 aa18.1■□□□□ 0.49
PNKP-221ENST00000627317 FAM205AQ6ZU69 1335 aa18.09■□□□□ 0.49
PNKP-221ENST00000627317 PITPNM2Q9BZ72 1349 aa18.09■□□□□ 0.49
PNKP-221ENST00000627317 CELF2O95319 508 aaKnown RBP18.09■□□□□ 0.49
PNKP-221ENST00000627317 GYG1P46976 350 aa18.09■□□□□ 0.49
PNKP-221ENST00000627317 MMP14P50281 582 aa18.09■□□□□ 0.49
PNKP-221ENST00000627317 FKBP1AP62942 108 aaKnown RBP18.09■□□□□ 0.49
PNKP-221ENST00000627317 TNNI3KQ59H18 835 aa18.09■□□□□ 0.49
PNKP-221ENST00000627317 SAPCD2Q86UD0 394 aa18.09■□□□□ 0.49
PNKP-221ENST00000627317 NEUROD6Q96NK8 337 aa18.09■□□□□ 0.49
PNKP-221ENST00000627317 LRRCC1Q9C099 1032 aa18.09■□□□□ 0.49
PNKP-221ENST00000627317 BCL11AQ9H165 835 aa18.09■□□□□ 0.49
PNKP-221ENST00000627317 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.09■□□□□ 0.49
PNKP-221ENST00000627317 FPGT-TNNI3KV9GXZ4 949 aa18.09■□□□□ 0.49
PNKP-221ENST00000627317 HIBADHP31937 336 aaKnown RBP18.08■□□□□ 0.48
PNKP-221ENST00000627317 TIMM10P62072 90 aa18.08■□□□□ 0.48
PNKP-221ENST00000627317 NBPF9Q3BBW0 867 aa18.08■□□□□ 0.48
PNKP-221ENST00000627317 ANGEL2Q5VTE6 544 aaKnown RBP18.08■□□□□ 0.48
PNKP-221ENST00000627317 FBXO33Q7Z6M2 555 aa18.08■□□□□ 0.48
PNKP-221ENST00000627317 KIAA0825Q8IV33 1275 aa18.08■□□□□ 0.48
PNKP-221ENST00000627317 FBXW7Q969H0 707 aa18.08■□□□□ 0.48
PNKP-221ENST00000627317 DCPSQ96C86 337 aaKnown RBP18.08■□□□□ 0.48
PNKP-221ENST00000627317 IL1RAPL2Q9NP60 686 aa18.08■□□□□ 0.48
PNKP-221ENST00000627317 ABT1Q9ULW3 272 aaKnown RBP18.08■□□□□ 0.48
PNKP-221ENST00000627317 WNT10BO00744 389 aa18.07■□□□□ 0.48
PNKP-221ENST00000627317 ADORA1P30542 326 aa18.07■□□□□ 0.48
PNKP-221ENST00000627317 GORABQ5T7V8 394 aa18.07■□□□□ 0.48
PNKP-221ENST00000627317 CLASRPQ8N2M8 674 aaKnown RBP18.07■□□□□ 0.48
PNKP-221ENST00000627317 OGFOD1Q8N543 542 aa18.07■□□□□ 0.48
PNKP-221ENST00000627317 GCC1Q96CN9 775 aa18.07■□□□□ 0.48
PNKP-221ENST00000627317 ZBTB47Q9UFB7 747 aaPredicted RBP18.07■□□□□ 0.48
PNKP-221ENST00000627317 BCAMP50895 628 aa18.06■□□□□ 0.48
PNKP-221ENST00000627317 DEFB115Q30KQ5 88 aa18.06■□□□□ 0.48
PNKP-221ENST00000627317 AACSQ86V21 672 aa18.06■□□□□ 0.48
PNKP-221ENST00000627317 XAGE2Q96GT9 111 aa18.06■□□□□ 0.48
PNKP-221ENST00000627317 HHIPL1Q96JK4 782 aa18.06■□□□□ 0.48
PNKP-221ENST00000627317 FRAT2O75474 233 aaPredicted RBP18.05■□□□□ 0.48
PNKP-221ENST00000627317 SULF1Q8IWU6 871 aa18.05■□□□□ 0.48
PNKP-221ENST00000627317 MTMR14Q8NCE2 650 aa18.05■□□□□ 0.48
PNKP-221ENST00000627317 GNL3LQ9NVN8 582 aaKnown RBP18.05■□□□□ 0.48
PNKP-221ENST00000627317 JAG2Q9Y219 1238 aa18.05■□□□□ 0.48
PNKP-221ENST00000627317 WDR33Q9C0J8 1336 aaKnown RBP18.04■□□□□ 0.48
PNKP-221ENST00000627317 COL1A1P02452 1464 aaPredicted RBP18.04■□□□□ 0.48
PNKP-221ENST00000627317 SMARCA5O60264 1052 aaPredicted RBP18.04■□□□□ 0.48
PNKP-221ENST00000627317 IGHDP01880 384 aa18.04■□□□□ 0.48
PNKP-221ENST00000627317 IFIT2P09913 472 aaKnown RBP18.04■□□□□ 0.48
PNKP-221ENST00000627317 HSPA1AP0DMV8 641 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms