RNA–Protein interactions for RNA: ENST00000626274.2

PNKP-219, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-219ENST00000626274 FAM205AQ6ZU69 1335 aa24.77■■□□□ 1.56
PNKP-219ENST00000626274 EGFRP00533 1210 aa24.76■■□□□ 1.55
PNKP-219ENST00000626274 MMP14P50281 582 aa24.76■■□□□ 1.55
PNKP-219ENST00000626274 AKAP2Q9Y2D5 859 aa24.76■■□□□ 1.55
PNKP-219ENST00000626274 ARAP2Q8WZ64 1704 aa24.75■■□□□ 1.55
PNKP-219ENST00000626274 FRAT2O75474 233 aaPredicted RBP24.75■■□□□ 1.55
PNKP-219ENST00000626274 SURF6O75683 361 aaKnown RBP24.75■■□□□ 1.55
PNKP-219ENST00000626274 ITGBL1O95965 494 aaPredicted RBP24.75■■□□□ 1.55
PNKP-219ENST00000626274 APLP1P51693 650 aa24.75■■□□□ 1.55
PNKP-219ENST00000626274 RRP1P56182 461 aaKnown RBP24.75■■□□□ 1.55
PNKP-219ENST00000626274 KIAA0825Q8IV33 1275 aa24.75■■□□□ 1.55
PNKP-219ENST00000626274 IQSEC3Q9UPP2 1182 aaPredicted RBP24.75■■□□□ 1.55
PNKP-219ENST00000626274 JAG2Q9Y219 1238 aa24.75■■□□□ 1.55
PNKP-219ENST00000626274 OS9Q13438 667 aaPredicted RBP24.74■■□□□ 1.55
PNKP-219ENST00000626274 RPAP2Q8IXW5 612 aaPredicted RBP24.74■■□□□ 1.55
PNKP-219ENST00000626274 CERS5Q8N5B7 392 aa24.74■■□□□ 1.55
PNKP-219ENST00000626274 MYOZ2Q9NPC6 264 aa24.74■■□□□ 1.55
PNKP-219ENST00000626274 HDAC9Q9UKV0 1011 aa24.74■■□□□ 1.55
PNKP-219ENST00000626274 NOP58Q9Y2X3 529 aaKnown RBP24.74■■□□□ 1.55
PNKP-219ENST00000626274 PASKQ96RG2 1323 aa24.73■■□□□ 1.55
PNKP-219ENST00000626274 A0A1B0GUL7 405 aa24.72■■□□□ 1.55
PNKP-219ENST00000626274 TIMM10P62072 90 aa24.72■■□□□ 1.55
PNKP-219ENST00000626274 CHAF1AQ13111 956 aaPredicted RBP24.71■■□□□ 1.55
PNKP-219ENST00000626274 MFSD14BQ5SR56 506 aa24.71■■□□□ 1.55
PNKP-219ENST00000626274 GNL3LQ9NVN8 582 aaKnown RBP24.71■■□□□ 1.55
PNKP-219ENST00000626274 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.71■■□□□ 1.55
PNKP-219ENST00000626274 TRPM7Q96QT4 1865 aa24.7■■□□□ 1.55
PNKP-219ENST00000626274 HMMRO75330 724 aa24.7■■□□□ 1.54
PNKP-219ENST00000626274 ADORA1P30542 326 aa24.7■■□□□ 1.54
PNKP-219ENST00000626274 TBC1D22AQ8WUA7 517 aa24.7■■□□□ 1.54
PNKP-219ENST00000626274 SCARF1Q14162 830 aa24.69■■□□□ 1.54
PNKP-219ENST00000626274 CDC37L1Q7L3B6 337 aa24.69■■□□□ 1.54
PNKP-219ENST00000626274 DCPSQ96C86 337 aaKnown RBP24.69■■□□□ 1.54
PNKP-219ENST00000626274 XAGE2Q96GT9 111 aa24.69■■□□□ 1.54
PNKP-219ENST00000626274 NEUROD6Q96NK8 337 aa24.69■■□□□ 1.54
PNKP-219ENST00000626274 F8W031 263 aaPredicted RBP24.68■■□□□ 1.54
PNKP-219ENST00000626274 PHKA1P46020 1223 aa24.68■■□□□ 1.54
PNKP-219ENST00000626274 CCDC102BQ68D86 513 aa24.68■■□□□ 1.54
PNKP-219ENST00000626274 GPR108Q9NPR9 543 aa24.68■■□□□ 1.54
PNKP-219ENST00000626274 SEMA3EO15041 775 aa24.67■■□□□ 1.54
PNKP-219ENST00000626274 SIRT2Q8IXJ6 389 aa24.67■■□□□ 1.54
PNKP-219ENST00000626274 GLIS2Q9BZE0 524 aaPredicted RBP24.67■■□□□ 1.54
PNKP-219ENST00000626274 GGA3Q9NZ52 723 aa24.67■■□□□ 1.54
PNKP-219ENST00000626274 TRAF5O00463 557 aa24.66■■□□□ 1.54
PNKP-219ENST00000626274 ZBTB22O15209 634 aa24.66■■□□□ 1.54
PNKP-219ENST00000626274 HSP90AB4PQ58FF6 505 aa24.66■■□□□ 1.54
PNKP-219ENST00000626274 ERC1Q8IUD2 1116 aa24.66■■□□□ 1.54
PNKP-219ENST00000626274 ASTN2O75129 1339 aaPredicted RBP24.65■■□□□ 1.54
PNKP-219ENST00000626274 WNT10BO00744 389 aa24.65■■□□□ 1.54
PNKP-219ENST00000626274 DLGAP5Q15398 846 aa24.65■■□□□ 1.54
PNKP-219ENST00000626274 NBPF9Q3BBW0 867 aa24.65■■□□□ 1.54
PNKP-219ENST00000626274 TNNI3KQ59H18 835 aa24.65■■□□□ 1.54
PNKP-219ENST00000626274 KRT26Q7Z3Y9 468 aa24.65■■□□□ 1.54
PNKP-219ENST00000626274 USP48Q86UV5 1035 aa24.65■■□□□ 1.54
PNKP-219ENST00000626274 WDR66Q8TBY9 1149 aa24.65■■□□□ 1.54
PNKP-219ENST00000626274 DENND2AQ9ULE3 1009 aa24.65■■□□□ 1.54
PNKP-219ENST00000626274 TTF2Q9UNY4 1162 aaKnown RBP24.65■■□□□ 1.54
PNKP-219ENST00000626274 EXOC6BQ9Y2D4 811 aa24.65■■□□□ 1.54
PNKP-219ENST00000626274 FPGT-TNNI3KV9GXZ4 949 aa24.65■■□□□ 1.54
PNKP-219ENST00000626274 ECM29Q5VYK3 1845 aa24.64■■□□□ 1.54
PNKP-219ENST00000626274 TMEM88BA6NKF7 163 aa24.64■■□□□ 1.54
PNKP-219ENST00000626274 HTRA3P83110 453 aa24.64■■□□□ 1.54
PNKP-219ENST00000626274 GORABQ5T7V8 394 aa24.64■■□□□ 1.54
PNKP-219ENST00000626274 ANGEL2Q5VTE6 544 aaKnown RBP24.64■■□□□ 1.54
PNKP-219ENST00000626274 SULF1Q8IWU6 871 aa24.64■■□□□ 1.54
PNKP-219ENST00000626274 MTMR14Q8NCE2 650 aa24.64■■□□□ 1.54
PNKP-219ENST00000626274 CREBZFQ9NS37 354 aa24.64■■□□□ 1.54
PNKP-219ENST00000626274 COL1A1P02452 1464 aaPredicted RBP24.64■■□□□ 1.53
PNKP-219ENST00000626274 PITPNM2Q9BZ72 1349 aa24.63■■□□□ 1.53
PNKP-219ENST00000626274 FMR1Q06787 632 aaKnown RBP eCLIP24.63■■□□□ 1.53
PNKP-219ENST00000626274 CFAP100Q494V2 611 aa24.63■■□□□ 1.53
PNKP-219ENST00000626274 ZBED3Q96IU2 234 aaPredicted RBP24.63■■□□□ 1.53
PNKP-219ENST00000626274 SUGT1Q9Y2Z0 365 aa24.63■■□□□ 1.53
PNKP-219ENST00000626274 GRIK5Q16478 980 aa24.62■■□□□ 1.53
PNKP-219ENST00000626274 RBM5P52756 815 aaKnown RBP eCLIP24.61■■□□□ 1.53
PNKP-219ENST00000626274 SERPINA10Q9UK55 444 aa24.61■■□□□ 1.53
PNKP-219ENST00000626274 ADM5C9JUS6 153 aa24.6■■□□□ 1.53
PNKP-219ENST00000626274 RASGRF1Q13972 1273 aa24.6■■□□□ 1.53
PNKP-219ENST00000626274 CRBNQ96SW2 442 aa24.6■■□□□ 1.53
PNKP-219ENST00000626274 MAST3O60307 1309 aa24.6■■□□□ 1.53
PNKP-219ENST00000626274 PDS5AQ29RF7 1337 aaKnown RBP24.6■■□□□ 1.53
PNKP-219ENST00000626274 SALL1Q9NSC2 1324 aa24.6■■□□□ 1.53
PNKP-219ENST00000626274 SPDYE2BA6NHP3 402 aa24.59■■□□□ 1.53
PNKP-219ENST00000626274 SPDYE6P0CI01 402 aa24.59■■□□□ 1.53
PNKP-219ENST00000626274 HDLBPQ00341 1268 aaKnown RBP24.59■■□□□ 1.53
PNKP-219ENST00000626274 RHPN1Q8TCX5 695 aa24.59■■□□□ 1.53
PNKP-219ENST00000626274 PRMT6Q96LA8 375 aaPredicted RBP24.59■■□□□ 1.53
PNKP-219ENST00000626274 DBNDD2Q9BQY9 259 aa24.59■■□□□ 1.53
PNKP-219ENST00000626274 PCDHAC2Q9Y5I4 1007 aa24.59■■□□□ 1.53
PNKP-219ENST00000626274 MYO1BO43795 1136 aa24.58■■□□□ 1.53
PNKP-219ENST00000626274 RAB11FIP3O75154 756 aa24.58■■□□□ 1.53
PNKP-219ENST00000626274 CELF2O95319 508 aaKnown RBP24.58■■□□□ 1.53
PNKP-219ENST00000626274 UQCRFS1P1P0C7P4 283 aa24.58■■□□□ 1.53
PNKP-219ENST00000626274 CRKP46108 304 aa24.58■■□□□ 1.53
PNKP-219ENST00000626274 CCDC158Q5M9N0 1113 aa24.58■■□□□ 1.53
PNKP-219ENST00000626274 CST9Q5W186 159 aa24.58■■□□□ 1.53
PNKP-219ENST00000626274 EAF2Q96CJ1 260 aaPredicted RBP24.58■■□□□ 1.53
PNKP-219ENST00000626274 KIF1BPQ96EK5 621 aa24.58■■□□□ 1.53
PNKP-219ENST00000626274 ARID4AP29374 1257 aaPredicted RBP24.57■■□□□ 1.52
PNKP-219ENST00000626274 DLK2Q6UY11 383 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms