RNA–Protein interactions for RNA: ENST00000626236.2

SGMS1-211, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 1,013 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-211ENST00000626236 HIBADHP31937 336 aaKnown RBP10.42□□□□□ -0.74
SGMS1-211ENST00000626236 PHKA1P46020 1223 aa10.42□□□□□ -0.74
SGMS1-211ENST00000626236 KIAA2012Q0VF49 1180 aa10.42□□□□□ -0.74
SGMS1-211ENST00000626236 DOK7Q18PE1 504 aa10.42□□□□□ -0.74
SGMS1-211ENST00000626236 CCDC158Q5M9N0 1113 aa10.42□□□□□ -0.74
SGMS1-211ENST00000626236 TSHZ3Q63HK5 1081 aa10.42□□□□□ -0.74
SGMS1-211ENST00000626236 CCDC102BQ68D86 513 aa10.42□□□□□ -0.74
SGMS1-211ENST00000626236 LARGE2Q8N3Y3 721 aa10.42□□□□□ -0.74
SGMS1-211ENST00000626236 FAM84BQ96KN1 310 aaPredicted RBP10.42□□□□□ -0.74
SGMS1-211ENST00000626236 DBNDD1Q9H9R9 158 aa10.42□□□□□ -0.74
SGMS1-211ENST00000626236 AK9Q5TCS8 1911 aa10.42□□□□□ -0.74
SGMS1-211ENST00000626236 AKAP11Q9UKA4 1901 aa10.42□□□□□ -0.74
SGMS1-211ENST00000626236 ZNF646O15015 1829 aaPredicted RBP10.42□□□□□ -0.74
SGMS1-211ENST00000626236 UTRNP46939 3433 aa10.42□□□□□ -0.74
SGMS1-211ENST00000626236 SALL3Q9BXA9 1300 aa10.41□□□□□ -0.74
SGMS1-211ENST00000626236 HAX1O00165 279 aa10.41□□□□□ -0.74
SGMS1-211ENST00000626236 GRIN3BO60391 1043 aa10.41□□□□□ -0.74
SGMS1-211ENST00000626236 RGS3P49796 1198 aa10.41□□□□□ -0.74
SGMS1-211ENST00000626236 FBXO33Q7Z6M2 555 aa10.41□□□□□ -0.74
SGMS1-211ENST00000626236 COA1Q9GZY4 146 aa10.41□□□□□ -0.74
SGMS1-211ENST00000626236 VPS33BQ9H267 617 aa10.41□□□□□ -0.74
SGMS1-211ENST00000626236 ECHDC1Q9NTX5 307 aa10.41□□□□□ -0.74
SGMS1-211ENST00000626236 GNL3LQ9NVN8 582 aaKnown RBP10.41□□□□□ -0.74
SGMS1-211ENST00000626236 IQSEC3Q9UPP2 1182 aaPredicted RBP10.41□□□□□ -0.74
SGMS1-211ENST00000626236 SCN9AQ15858 1988 aa10.41□□□□□ -0.74
SGMS1-211ENST00000626236 TTC41PQ6P2S7 1318 aa10.4□□□□□ -0.74
SGMS1-211ENST00000626236 ECE2O60344 883 aa10.4□□□□□ -0.74
SGMS1-211ENST00000626236 FRAT2O75474 233 aaPredicted RBP10.4□□□□□ -0.74
SGMS1-211ENST00000626236 UQCRFS1P1P0C7P4 283 aa10.4□□□□□ -0.74
SGMS1-211ENST00000626236 LMNB1P20700 586 aa10.4□□□□□ -0.74
SGMS1-211ENST00000626236 ARID4AP29374 1257 aaPredicted RBP10.4□□□□□ -0.74
SGMS1-211ENST00000626236 PRELPP51888 382 aa10.4□□□□□ -0.74
SGMS1-211ENST00000626236 PDE1AP54750 535 aa10.4□□□□□ -0.74
SGMS1-211ENST00000626236 PLEKHM2Q8IWE5 1019 aa10.4□□□□□ -0.74
SGMS1-211ENST00000626236 NIM1KQ8IY84 436 aa10.4□□□□□ -0.74
SGMS1-211ENST00000626236 CD209Q9NNX6 404 aa10.4□□□□□ -0.74
SGMS1-211ENST00000626236 MYO5AQ9Y4I1 1855 aaKnown RBP10.4□□□□□ -0.75
SGMS1-211ENST00000626236 COL1A1P02452 1464 aaPredicted RBP10.39□□□□□ -0.75
SGMS1-211ENST00000626236 ERC2O15083 957 aa10.39□□□□□ -0.75
SGMS1-211ENST00000626236 IL1R1P14778 569 aa10.39□□□□□ -0.75
SGMS1-211ENST00000626236 MCAMP43121 646 aa10.39□□□□□ -0.75
SGMS1-211ENST00000626236 CHAF1AQ13111 956 aaPredicted RBP10.39□□□□□ -0.75
SGMS1-211ENST00000626236 RASGRF1Q13972 1273 aa10.39□□□□□ -0.75
SGMS1-211ENST00000626236 SCARF1Q14162 830 aa10.39□□□□□ -0.75
SGMS1-211ENST00000626236 JDP2Q8WYK2 163 aa10.39□□□□□ -0.75
SGMS1-211ENST00000626236 FBXW7Q969H0 707 aa10.39□□□□□ -0.75
SGMS1-211ENST00000626236 BOLA2Q9H3K6 86 aa10.39□□□□□ -0.75
SGMS1-211ENST00000626236 STAP2Q9UGK3 403 aa10.39□□□□□ -0.75
SGMS1-211ENST00000626236 JAG2Q9Y219 1238 aa10.39□□□□□ -0.75
SGMS1-211ENST00000626236 DOCK2Q92608 1830 aa10.39□□□□□ -0.75
SGMS1-211ENST00000626236 MYH7P12883 1935 aa10.39□□□□□ -0.75
SGMS1-211ENST00000626236 AOX1Q06278 1338 aa10.38□□□□□ -0.75
SGMS1-211ENST00000626236 SEMA3EO15041 775 aa10.38□□□□□ -0.75
SGMS1-211ENST00000626236 GLRX3O76003 335 aaKnown RBP10.38□□□□□ -0.75
SGMS1-211ENST00000626236 ATP5JP18859 108 aa10.38□□□□□ -0.75
SGMS1-211ENST00000626236 NUBP1P53384 320 aa10.38□□□□□ -0.75
SGMS1-211ENST00000626236 EVX2Q03828 476 aa10.38□□□□□ -0.75
SGMS1-211ENST00000626236 PI16Q6UXB8 463 aa10.38□□□□□ -0.75
SGMS1-211ENST00000626236 PODNQ7Z5L7 613 aa10.38□□□□□ -0.75
SGMS1-211ENST00000626236 RASEFQ8IZ41 740 aa10.38□□□□□ -0.75
SGMS1-211ENST00000626236 SPATA5Q8NB90 893 aa10.38□□□□□ -0.75
SGMS1-211ENST00000626236 TDRD7Q8NHU6 1098 aaKnown RBP10.38□□□□□ -0.75
SGMS1-211ENST00000626236 PI4K2BQ8TCG2 481 aa10.38□□□□□ -0.75
SGMS1-211ENST00000626236 SPOCK2Q92563 424 aa10.38□□□□□ -0.75
SGMS1-211ENST00000626236 ZNF512BQ96KM6 892 aaPredicted RBP10.38□□□□□ -0.75
SGMS1-211ENST00000626236 DNAJC2Q99543 621 aaKnown RBP10.38□□□□□ -0.75
SGMS1-211ENST00000626236 SNRKQ9NRH2 765 aa10.38□□□□□ -0.75
SGMS1-211ENST00000626236 RNF181Q9P0P0 153 aa10.38□□□□□ -0.75
SGMS1-211ENST00000626236 DENND2AQ9ULE3 1009 aa10.38□□□□□ -0.75
SGMS1-211ENST00000626236 ZNRF3Q9ULT6 936 aa10.38□□□□□ -0.75
SGMS1-211ENST00000626236 NDUFB9Q9Y6M9 179 aa10.38□□□□□ -0.75
SGMS1-211ENST00000626236 MAST2Q6P0Q8 1798 aa10.37□□□□□ -0.75
SGMS1-211ENST00000626236 YDJCA8MPS7 323 aa10.37□□□□□ -0.75
SGMS1-211ENST00000626236 MAP4K4O95819 1239 aaPredicted RBP10.37□□□□□ -0.75
SGMS1-211ENST00000626236 ZAP70P43403 619 aa10.37□□□□□ -0.75
SGMS1-211ENST00000626236 GTF2IP78347 998 aa10.37□□□□□ -0.75
SGMS1-211ENST00000626236 C9orf131Q5VYM1 1079 aa10.37□□□□□ -0.75
SGMS1-211ENST00000626236 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.37□□□□□ -0.75
SGMS1-211ENST00000626236 OSBPL3Q9H4L5 887 aa10.37□□□□□ -0.75
SGMS1-211ENST00000626236 KCNQ5Q9NR82 932 aa10.37□□□□□ -0.75
SGMS1-211ENST00000626236 HMG20BQ9P0W2 317 aa10.37□□□□□ -0.75
SGMS1-211ENST00000626236 USP17L3A6NCW0 530 aa10.36□□□□□ -0.75
SGMS1-211ENST00000626236 USP17L4A6NCW7 530 aa10.36□□□□□ -0.75
SGMS1-211ENST00000626236 RAD17O75943 681 aa10.36□□□□□ -0.75
SGMS1-211ENST00000626236 TTC22Q5TAA0 569 aa10.36□□□□□ -0.75
SGMS1-211ENST00000626236 TTLL5Q6EMB2 1281 aa10.36□□□□□ -0.75
SGMS1-211ENST00000626236 USP17L1Q7RTZ2 530 aa10.36□□□□□ -0.75
SGMS1-211ENST00000626236 HAUS7Q99871 368 aa10.36□□□□□ -0.75
SGMS1-211ENST00000626236 TSPYL2Q9H2G4 693 aaPredicted RBP10.36□□□□□ -0.75
SGMS1-211ENST00000626236 PAG1Q9NWQ8 432 aa10.36□□□□□ -0.75
SGMS1-211ENST00000626236 PDS5AQ29RF7 1337 aaKnown RBP10.35□□□□□ -0.75
SGMS1-211ENST00000626236 FAM205AQ6ZU69 1335 aa10.35□□□□□ -0.75
SGMS1-211ENST00000626236 TRIM6-TRIM34B2RNG4 842 aa10.35□□□□□ -0.75
SGMS1-211ENST00000626236 FZD9O00144 591 aa10.35□□□□□ -0.75
SGMS1-211ENST00000626236 GOLIM4O00461 696 aa10.35□□□□□ -0.75
SGMS1-211ENST00000626236 CYP2E1P05181 493 aaPredicted RBP10.35□□□□□ -0.75
SGMS1-211ENST00000626236 EIF6P56537 245 aaKnown RBP10.35□□□□□ -0.75
SGMS1-211ENST00000626236 WDR66Q8TBY9 1149 aa10.35□□□□□ -0.75
SGMS1-211ENST00000626236 EDC3Q96F86 508 aaKnown RBP10.35□□□□□ -0.75
SGMS1-211ENST00000626236 MXD3Q9BW11 206 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms