RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 ZNF804BA4D1E1 1349 aa18.11■□□□□ 0.49
SNX1-214ENST00000625244 ZSWIM8A7E2V4 1837 aa18.1■□□□□ 0.49
SNX1-214ENST00000625244 AOX1Q06278 1338 aa18.1■□□□□ 0.49
SNX1-214ENST00000625244 CLRN2A0PK11 232 aa18.1■□□□□ 0.49
SNX1-214ENST00000625244 KLRK1P26718 216 aa18.1■□□□□ 0.49
SNX1-214ENST00000625244 RIPK4P57078 832 aa18.1■□□□□ 0.49
SNX1-214ENST00000625244 GTF2IP78347 998 aa18.1■□□□□ 0.49
SNX1-214ENST00000625244 COL25A1Q9BXS0 654 aaPredicted RBP18.1■□□□□ 0.49
SNX1-214ENST00000625244 EYSQ5T1H1 3165 aa18.1■□□□□ 0.49
SNX1-214ENST00000625244 CCL15-CCL14A0A0B4J2E2 113 aa18.09■□□□□ 0.49
SNX1-214ENST00000625244 PCCAP05165 728 aaPredicted RBP18.09■□□□□ 0.49
SNX1-214ENST00000625244 LACTBP83111 547 aaPredicted RBP18.09■□□□□ 0.49
SNX1-214ENST00000625244 CCL15Q16663 113 aa18.09■□□□□ 0.49
SNX1-214ENST00000625244 MTMR14Q8NCE2 650 aa18.09■□□□□ 0.49
SNX1-214ENST00000625244 BSDC1Q9NW68 430 aaPredicted RBP18.09■□□□□ 0.49
SNX1-214ENST00000625244 DBF4Q9UBU7 674 aaPredicted RBP18.09■□□□□ 0.49
SNX1-214ENST00000625244 GJA8P48165 433 aa18.08■□□□□ 0.48
SNX1-214ENST00000625244 RIC3Q7Z5B4 369 aa18.08■□□□□ 0.48
SNX1-214ENST00000625244 NKX2-3Q8TAU0 364 aa18.08■□□□□ 0.48
SNX1-214ENST00000625244 VEZTQ9HBM0 779 aa18.08■□□□□ 0.48
SNX1-214ENST00000625244 STAP2Q9UGK3 403 aa18.08■□□□□ 0.48
SNX1-214ENST00000625244 TLR2O60603 784 aa18.07■□□□□ 0.48
SNX1-214ENST00000625244 ECM2O94769 699 aaPredicted RBP18.07■□□□□ 0.48
SNX1-214ENST00000625244 RASA3Q14644 834 aa18.07■□□□□ 0.48
SNX1-214ENST00000625244 KIF22Q14807 665 aa18.07■□□□□ 0.48
SNX1-214ENST00000625244 CERS5Q8N5B7 392 aa18.07■□□□□ 0.48
SNX1-214ENST00000625244 PRMT6Q96LA8 375 aaPredicted RBP18.07■□□□□ 0.48
SNX1-214ENST00000625244 CDC5LQ99459 802 aaKnown RBP18.07■□□□□ 0.48
SNX1-214ENST00000625244 MYD88Q99836 296 aa18.07■□□□□ 0.48
SNX1-214ENST00000625244 HYPKQ9NX55 129 aa18.07■□□□□ 0.48
SNX1-214ENST00000625244 SPDYE2BA6NHP3 402 aa18.06■□□□□ 0.48
SNX1-214ENST00000625244 CHL1O00533 1208 aa18.06■□□□□ 0.48
SNX1-214ENST00000625244 GJB1P08034 283 aa18.06■□□□□ 0.48
SNX1-214ENST00000625244 SPDYE6P0CI01 402 aa18.06■□□□□ 0.48
SNX1-214ENST00000625244 CTGFP29279 349 aa18.06■□□□□ 0.48
SNX1-214ENST00000625244 GTF2A2P52657 109 aa18.06■□□□□ 0.48
SNX1-214ENST00000625244 CFAP100Q494V2 611 aa18.06■□□□□ 0.48
SNX1-214ENST00000625244 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.06■□□□□ 0.48
SNX1-214ENST00000625244 DEFB123Q8N688 67 aa18.06■□□□□ 0.48
SNX1-214ENST00000625244 F8W031 263 aaPredicted RBP18.05■□□□□ 0.48
SNX1-214ENST00000625244 GNRH1P01148 92 aa18.05■□□□□ 0.48
SNX1-214ENST00000625244 PRMT2P55345 433 aa18.05■□□□□ 0.48
SNX1-214ENST00000625244 Q7L0L9 218 aa18.05■□□□□ 0.48
SNX1-214ENST00000625244 CCDC191Q8NCU4 936 aa18.05■□□□□ 0.48
SNX1-214ENST00000625244 PNNQ9H307 717 aaKnown RBP18.05■□□□□ 0.48
SNX1-214ENST00000625244 GREM2Q9H772 168 aa18.05■□□□□ 0.48
SNX1-214ENST00000625244 STXBP5LQ9Y2K9 1186 aa18.05■□□□□ 0.48
SNX1-214ENST00000625244 LEMD3Q9Y2U8 911 aa18.05■□□□□ 0.48
SNX1-214ENST00000625244 OTOFQ9HC10 1997 aa18.04■□□□□ 0.48
SNX1-214ENST00000625244 PRUNE2Q8WUY3 3088 aa18.04■□□□□ 0.48
SNX1-214ENST00000625244 MYO1BO43795 1136 aa18.04■□□□□ 0.48
SNX1-214ENST00000625244 CCL5P13501 91 aa18.04■□□□□ 0.48
SNX1-214ENST00000625244 CTSWP56202 376 aa18.04■□□□□ 0.48
SNX1-214ENST00000625244 CDAN1Q8IWY9 1227 aa18.04■□□□□ 0.48
SNX1-214ENST00000625244 CWC25Q9NXE8 425 aaPredicted RBP18.04■□□□□ 0.48
SNX1-214ENST00000625244 FARP2O94887 1054 aaPredicted RBP18.03■□□□□ 0.48
SNX1-214ENST00000625244 HOXB7P09629 217 aa18.03■□□□□ 0.48
SNX1-214ENST00000625244 GOLGA2Q08379 1002 aa18.03■□□□□ 0.48
SNX1-214ENST00000625244 VGLL4Q14135 290 aa18.03■□□□□ 0.48
SNX1-214ENST00000625244 TTLL11Q8NHH1 800 aa18.03■□□□□ 0.48
SNX1-214ENST00000625244 RNF208Q9H0X6 261 aa18.03■□□□□ 0.48
SNX1-214ENST00000625244 PHAXQ9H814 394 aaKnown RBP18.03■□□□□ 0.48
SNX1-214ENST00000625244 SRRDQ9UH36 339 aa18.03■□□□□ 0.48
SNX1-214ENST00000625244 RIPOR2Q9Y4F9 1068 aa18.03■□□□□ 0.48
SNX1-214ENST00000625244 LAS1LQ9Y4W2 734 aaKnown RBP18.03■□□□□ 0.48
SNX1-214ENST00000625244 EVI5O60447 810 aa18.02■□□□□ 0.48
SNX1-214ENST00000625244 GRK4P32298 578 aa18.02■□□□□ 0.48
SNX1-214ENST00000625244 TMPOP42166 694 aaKnown RBP18.02■□□□□ 0.48
SNX1-214ENST00000625244 GPR153Q6NV75 609 aa18.02■□□□□ 0.48
SNX1-214ENST00000625244 TRIM47Q96LD4 638 aa18.02■□□□□ 0.48
SNX1-214ENST00000625244 CD209Q9NNX6 404 aa18.02■□□□□ 0.48
SNX1-214ENST00000625244 BTBD19C9JJ37 291 aa18.01■□□□□ 0.47
SNX1-214ENST00000625244 PSMC4P43686 418 aa18.01■□□□□ 0.47
SNX1-214ENST00000625244 MAP3K9P80192 1104 aa18.01■□□□□ 0.47
SNX1-214ENST00000625244 RAET1EQ8TD07 263 aa18.01■□□□□ 0.47
SNX1-214ENST00000625244 U2AF1L4Q8WU68 220 aaKnown RBP18.01■□□□□ 0.47
SNX1-214ENST00000625244 WDHD1O75717 1129 aaPredicted RBP18■□□□□ 0.47
SNX1-214ENST00000625244 OSBPP22059 807 aa18■□□□□ 0.47
SNX1-214ENST00000625244 LMOD3Q0VAK6 560 aa18■□□□□ 0.47
SNX1-214ENST00000625244 C17orf99Q6UX52 265 aa18■□□□□ 0.47
SNX1-214ENST00000625244 CCER1Q8TC90 406 aaPredicted RBP18■□□□□ 0.47
SNX1-214ENST00000625244 TEPSINQ96N21 525 aa18■□□□□ 0.47
SNX1-214ENST00000625244 ECM29Q5VYK3 1845 aa18■□□□□ 0.47
SNX1-214ENST00000625244 SPEF2Q9C093 1822 aa18■□□□□ 0.47
SNX1-214ENST00000625244 MUC3AQ02505 3323 aa17.99■□□□□ 0.47
SNX1-214ENST00000625244 DUSP27Q5VZP5 1158 aa17.99■□□□□ 0.47
SNX1-214ENST00000625244 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.99■□□□□ 0.47
SNX1-214ENST00000625244 ZCCHC17Q9NP64 241 aaKnown RBP17.99■□□□□ 0.47
SNX1-214ENST00000625244 MTMR10Q9NXD2 777 aa17.99■□□□□ 0.47
SNX1-214ENST00000625244 BIN2Q9UBW5 565 aaPredicted RBP17.99■□□□□ 0.47
SNX1-214ENST00000625244 CETPP11597 493 aa17.98■□□□□ 0.47
SNX1-214ENST00000625244 RBM5P52756 815 aaKnown RBP eCLIP17.98■□□□□ 0.47
SNX1-214ENST00000625244 GDF15Q99988 308 aa17.98■□□□□ 0.47
SNX1-214ENST00000625244 UNC93B1Q9H1C4 597 aa17.98■□□□□ 0.47
SNX1-214ENST00000625244 CPA4Q9UI42 421 aa17.98■□□□□ 0.47
SNX1-214ENST00000625244 JAG2Q9Y219 1238 aa17.98■□□□□ 0.47
SNX1-214ENST00000625244 CSADQ9Y600 493 aa17.98■□□□□ 0.47
SNX1-214ENST00000625244 SPDYE5A6NIY4 337 aa17.97■□□□□ 0.47
SNX1-214ENST00000625244 SNAP23O00161 211 aa17.97■□□□□ 0.47
SNX1-214ENST00000625244 FMNL1O95466 1100 aaPredicted RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms