RNA–Protein interactions for RNA: ENST00000624341.3

ERCC6-213, Transcript of ERCC excision repair 6, chromatin remodeling factor, humanhuman

TSL 1 (best)

Gene ERCC6, Length 5,761 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6-213ENST00000624341 ZNF569Q5MCW4 686 aa6.43□□□□□ -1.38
ERCC6-213ENST00000624341 DHX58Q96C10 678 aa6.43□□□□□ -1.38
ERCC6-213ENST00000624341 CAPZA3Q96KX2 299 aa6.43□□□□□ -1.38
ERCC6-213ENST00000624341 PHF8Q9UPP1 1060 aa6.43□□□□□ -1.38
ERCC6-213ENST00000624341 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.43□□□□□ -1.38
ERCC6-213ENST00000624341 DIP2AQ14689 1571 aa6.43□□□□□ -1.38
ERCC6-213ENST00000624341 EVCP57679 992 aa6.43□□□□□ -1.38
ERCC6-213ENST00000624341 LMBR1LQ6UX01 489 aa6.43□□□□□ -1.38
ERCC6-213ENST00000624341 COPS6Q7L5N1 327 aa6.43□□□□□ -1.38
ERCC6-213ENST00000624341 GAS2L3Q86XJ1 694 aa6.43□□□□□ -1.38
ERCC6-213ENST00000624341 CEP112Q8N8E3 955 aa6.43□□□□□ -1.38
ERCC6-213ENST00000624341 EHBP1Q8NDI1 1231 aa6.43□□□□□ -1.38
ERCC6-213ENST00000624341 CWC25Q9NXE8 425 aaPredicted RBP6.43□□□□□ -1.38
ERCC6-213ENST00000624341 TMOD3Q9NYL9 352 aa6.43□□□□□ -1.38
ERCC6-213ENST00000624341 GUCA1BQ9UMX6 200 aa6.43□□□□□ -1.38
ERCC6-213ENST00000624341 TMEM2Q9UHN6 1383 aa6.43□□□□□ -1.38
ERCC6-213ENST00000624341 CYLC1P35663 651 aaPredicted RBP6.42□□□□□ -1.38
ERCC6-213ENST00000624341 CKAP4Q07065 602 aaKnown RBP6.42□□□□□ -1.38
ERCC6-213ENST00000624341 EIF4A2Q14240 407 aaKnown RBP6.42□□□□□ -1.38
ERCC6-213ENST00000624341 DZIP1Q86YF9 867 aaKnown RBP6.42□□□□□ -1.38
ERCC6-213ENST00000624341 XAGE3Q8WTP9 111 aa6.42□□□□□ -1.38
ERCC6-213ENST00000624341 GCOM1H8Y6P7 765 aaPredicted RBP6.42□□□□□ -1.38
ERCC6-213ENST00000624341 PRC1O43663 620 aa6.42□□□□□ -1.38
ERCC6-213ENST00000624341 TUBB4AP04350 444 aa6.42□□□□□ -1.38
ERCC6-213ENST00000624341 MYZAPP0CAP1 466 aa6.42□□□□□ -1.38
ERCC6-213ENST00000624341 CETN2P41208 172 aa6.42□□□□□ -1.38
ERCC6-213ENST00000624341 WTAPQ15007 396 aa6.42□□□□□ -1.38
ERCC6-213ENST00000624341 MTHFSDQ2M296 383 aaKnown RBP6.42□□□□□ -1.38
ERCC6-213ENST00000624341 CWF19L2Q2TBE0 894 aaKnown RBP6.42□□□□□ -1.38
ERCC6-213ENST00000624341 G2E3Q7L622 706 aa6.42□□□□□ -1.38
ERCC6-213ENST00000624341 TRMT1LQ7Z2T5 733 aaKnown RBP6.42□□□□□ -1.38
ERCC6-213ENST00000624341 CALML4Q96GE6 196 aa6.42□□□□□ -1.38
ERCC6-213ENST00000624341 ERO1AQ96HE7 468 aa6.42□□□□□ -1.38
ERCC6-213ENST00000624341 CTAGE1Q96RT6 745 aa6.42□□□□□ -1.38
ERCC6-213ENST00000624341 SBNO2Q9Y2G9 1366 aa6.42□□□□□ -1.38
ERCC6-213ENST00000624341 AMPD3Q01432 767 aa6.42□□□□□ -1.38
ERCC6-213ENST00000624341 SLC39A6Q13433 755 aa6.42□□□□□ -1.38
ERCC6-213ENST00000624341 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.42□□□□□ -1.38
ERCC6-213ENST00000624341 PIK3C2GO75747 1445 aa6.42□□□□□ -1.38
ERCC6-213ENST00000624341 TSPY2A6NKD2 308 aa6.42□□□□□ -1.38
ERCC6-213ENST00000624341 RXRAP19793 462 aa6.42□□□□□ -1.38
ERCC6-213ENST00000624341 ELF2Q15723 593 aa6.42□□□□□ -1.38
ERCC6-213ENST00000624341 ZNF287Q9HBT7 754 aa6.42□□□□□ -1.38
ERCC6-213ENST00000624341 NWD1Q149M9 1564 aa6.42□□□□□ -1.38
ERCC6-213ENST00000624341 SOS1Q07889 1333 aaPredicted RBP6.42□□□□□ -1.38
ERCC6-213ENST00000624341 ZEB2O60315 1214 aa6.42□□□□□ -1.38
ERCC6-213ENST00000624341 TTF1Q15361 905 aaPredicted RBP6.42□□□□□ -1.38
ERCC6-213ENST00000624341 FAM114A1Q8IWE2 563 aa6.42□□□□□ -1.38
ERCC6-213ENST00000624341 CHAMP1Q96JM3 812 aa6.42□□□□□ -1.38
ERCC6-213ENST00000624341 CBX8Q9HC52 389 aa6.42□□□□□ -1.38
ERCC6-213ENST00000624341 TRPM2O94759 1503 aa6.41□□□□□ -1.38
ERCC6-213ENST00000624341 TTC41PQ6P2S7 1318 aa6.41□□□□□ -1.38
ERCC6-213ENST00000624341 EBAG9O00559 213 aa6.41□□□□□ -1.38
ERCC6-213ENST00000624341 PPP2R3AQ06190 1150 aa6.41□□□□□ -1.38
ERCC6-213ENST00000624341 SPAG1Q07617 926 aa6.41□□□□□ -1.38
ERCC6-213ENST00000624341 KSR2Q6VAB6 950 aa6.41□□□□□ -1.38
ERCC6-213ENST00000624341 PLCD3Q8N3E9 789 aa6.41□□□□□ -1.38
ERCC6-213ENST00000624341 SPHKAPQ2M3C7 1700 aa6.41□□□□□ -1.38
ERCC6-213ENST00000624341 NCOA3Q9Y6Q9 1424 aa6.41□□□□□ -1.38
ERCC6-213ENST00000624341 RTN1Q16799 776 aa6.41□□□□□ -1.38
ERCC6-213ENST00000624341 DHX32Q7L7V1 743 aaKnown RBP6.41□□□□□ -1.38
ERCC6-213ENST00000624341 ALDH1L1O75891 902 aa6.41□□□□□ -1.38
ERCC6-213ENST00000624341 KIF20AO95235 890 aa6.41□□□□□ -1.38
ERCC6-213ENST00000624341 HSPA1LP34931 641 aa6.41□□□□□ -1.38
ERCC6-213ENST00000624341 HSPA4P34932 840 aa6.41□□□□□ -1.38
ERCC6-213ENST00000624341 STAT6P42226 847 aa6.41□□□□□ -1.38
ERCC6-213ENST00000624341 PKP1Q13835 747 aa6.41□□□□□ -1.38
ERCC6-213ENST00000624341 SPECC1LQ69YQ0 1117 aa6.41□□□□□ -1.38
ERCC6-213ENST00000624341 EXOC1Q9NV70 894 aa6.41□□□□□ -1.38
ERCC6-213ENST00000624341 IQSEC3Q9UPP2 1182 aaPredicted RBP6.41□□□□□ -1.38
ERCC6-213ENST00000624341 ZNF75DP51815 510 aa6.41□□□□□ -1.38
ERCC6-213ENST00000624341 SLC9C2Q5TAH2 1124 aa6.41□□□□□ -1.38
ERCC6-213ENST00000624341 KRBA2Q6ZNG9 492 aa6.41□□□□□ -1.38
ERCC6-213ENST00000624341 SPAG5Q96R06 1193 aa6.41□□□□□ -1.38
ERCC6-213ENST00000624341 CARD6Q9BX69 1037 aa6.41□□□□□ -1.38
ERCC6-213ENST00000624341 MMRN2Q9H8L6 949 aa6.41□□□□□ -1.38
ERCC6-213ENST00000624341 RMND1Q9NWS8 449 aa6.41□□□□□ -1.38
ERCC6-213ENST00000624341 SNX14Q9Y5W7 946 aa6.41□□□□□ -1.38
ERCC6-213ENST00000624341 E9PCH4 1651 aa6.41□□□□□ -1.38
ERCC6-213ENST00000624341 SNRPA1P09661 255 aaKnown RBP6.4□□□□□ -1.38
ERCC6-213ENST00000624341 NBPF7P0C2Y1 421 aaPredicted RBP6.4□□□□□ -1.38
ERCC6-213ENST00000624341 KIF5BP33176 963 aa6.4□□□□□ -1.38
ERCC6-213ENST00000624341 TERF1P54274 439 aa6.4□□□□□ -1.38
ERCC6-213ENST00000624341 FAM160A1Q05DH4 1040 aa6.4□□□□□ -1.38
ERCC6-213ENST00000624341 KIF5AQ12840 1032 aa6.4□□□□□ -1.38
ERCC6-213ENST00000624341 CCDC91Q7Z6B0 441 aa6.4□□□□□ -1.38
ERCC6-213ENST00000624341 CEP57Q86XR8 500 aa6.4□□□□□ -1.38
ERCC6-213ENST00000624341 BAG1Q99933 345 aaPredicted RBP6.4□□□□□ -1.38
ERCC6-213ENST00000624341 PYM1Q9BRP8 204 aaKnown RBP6.4□□□□□ -1.38
ERCC6-213ENST00000624341 TAOK3Q9H2K8 898 aa6.4□□□□□ -1.38
ERCC6-213ENST00000624341 BCL2L12Q9HB09 334 aa6.4□□□□□ -1.38
ERCC6-213ENST00000624341 PAG1Q9NWQ8 432 aa6.4□□□□□ -1.38
ERCC6-213ENST00000624341 TRIM75PA6NK02 468 aa6.4□□□□□ -1.38
ERCC6-213ENST00000624341 NUTM2BA6NNL0 878 aaPredicted RBP6.4□□□□□ -1.38
ERCC6-213ENST00000624341 NUTM2EB1AL46 878 aaPredicted RBP6.4□□□□□ -1.38
ERCC6-213ENST00000624341 TACC1O75410 805 aa6.4□□□□□ -1.38
ERCC6-213ENST00000624341 ZFYP08048 801 aaPredicted RBP6.4□□□□□ -1.38
ERCC6-213ENST00000624341 POTEJP0CG39 1038 aa6.4□□□□□ -1.38
ERCC6-213ENST00000624341 KCNA6P17658 529 aa6.4□□□□□ -1.38
ERCC6-213ENST00000624341 MYL5Q02045 173 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms