RNA–Protein interactions for RNA: ENST00000622186.4

SLC6A6-210, Transcript of solute carrier family 6 member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-210ENST00000622186 ZSWIM4Q9H7M6 989 aa13.69□□□□□ -0.22
SLC6A6-210ENST00000622186 RNF216Q9NWF9 866 aaPredicted RBP13.69□□□□□ -0.22
SLC6A6-210ENST00000622186 PSMD6Q15008 389 aa13.68□□□□□ -0.22
SLC6A6-210ENST00000622186 HOOK2Q96ED9 719 aa13.68□□□□□ -0.22
SLC6A6-210ENST00000622186 NAP1L4Q99733 375 aaKnown RBP13.68□□□□□ -0.22
SLC6A6-210ENST00000622186 KCNK9Q9NPC2 374 aa13.68□□□□□ -0.22
SLC6A6-210ENST00000622186 IRX3P78415 501 aaPredicted RBP13.68□□□□□ -0.22
SLC6A6-210ENST00000622186 CLUL1Q15846 466 aa13.68□□□□□ -0.22
SLC6A6-210ENST00000622186 CCDC61Q9Y6R9 512 aa13.68□□□□□ -0.22
SLC6A6-210ENST00000622186 CDAN1Q8IWY9 1227 aa13.68□□□□□ -0.22
SLC6A6-210ENST00000622186 ATAD2Q6PL18 1390 aa13.68□□□□□ -0.22
SLC6A6-210ENST00000622186 CHMP2AO43633 222 aa13.68□□□□□ -0.22
SLC6A6-210ENST00000622186 CEBPAP49715 358 aaPredicted RBP13.68□□□□□ -0.22
SLC6A6-210ENST00000622186 MSH6P52701 1360 aa13.68□□□□□ -0.22
SLC6A6-210ENST00000622186 DNM2P50570 870 aa13.68□□□□□ -0.22
SLC6A6-210ENST00000622186 RTN1Q16799 776 aa13.68□□□□□ -0.22
SLC6A6-210ENST00000622186 MUM1L1Q5H9M0 696 aa13.68□□□□□ -0.22
SLC6A6-210ENST00000622186 SEC62Q99442 399 aaKnown RBP13.68□□□□□ -0.22
SLC6A6-210ENST00000622186 LARP6Q9BRS8 491 aaKnown RBP13.68□□□□□ -0.22
SLC6A6-210ENST00000622186 SLC7A5P2Q9GIP4 190 aa13.68□□□□□ -0.22
SLC6A6-210ENST00000622186 SMTNP53814 917 aa13.67□□□□□ -0.22
SLC6A6-210ENST00000622186 ITIH3Q06033 890 aa13.67□□□□□ -0.22
SLC6A6-210ENST00000622186 CCDC183Q5T5S1 534 aa13.67□□□□□ -0.22
SLC6A6-210ENST00000622186 ZNF467Q7Z7K2 595 aaPredicted RBP13.67□□□□□ -0.22
SLC6A6-210ENST00000622186 LARGE2Q8N3Y3 721 aa13.67□□□□□ -0.22
SLC6A6-210ENST00000622186 EVI5LQ96CN4 794 aa13.67□□□□□ -0.22
SLC6A6-210ENST00000622186 MCM9Q9NXL9 1143 aa13.67□□□□□ -0.22
SLC6A6-210ENST00000622186 ERCC6LQ2NKX8 1250 aa13.67□□□□□ -0.22
SLC6A6-210ENST00000622186 NOX5Q96PH1 765 aa13.67□□□□□ -0.22
SLC6A6-210ENST00000622186 PTGS1P23219 599 aa13.67□□□□□ -0.22
SLC6A6-210ENST00000622186 SARNPP82979 210 aaKnown RBP13.67□□□□□ -0.22
SLC6A6-210ENST00000622186 SEPT14Q6ZU15 432 aa13.67□□□□□ -0.22
SLC6A6-210ENST00000622186 LEO1Q8WVC0 666 aaPredicted RBP13.67□□□□□ -0.22
SLC6A6-210ENST00000622186 SKA2Q8WVK7 121 aaPredicted RBP13.67□□□□□ -0.22
SLC6A6-210ENST00000622186 FLIIQ13045 1269 aa13.66□□□□□ -0.22
SLC6A6-210ENST00000622186 STX1AQ16623 288 aa13.66□□□□□ -0.22
SLC6A6-210ENST00000622186 DCAF17Q5H9S7 520 aaPredicted RBP13.66□□□□□ -0.22
SLC6A6-210ENST00000622186 WDR48Q8TAF3 677 aa13.66□□□□□ -0.22
SLC6A6-210ENST00000622186 KIFAP3Q92845 792 aa13.66□□□□□ -0.22
SLC6A6-210ENST00000622186 GRPEL1Q9HAV7 217 aa13.66□□□□□ -0.22
SLC6A6-210ENST00000622186 F6X3S4 739 aa13.66□□□□□ -0.22
SLC6A6-210ENST00000622186 SRGAP1Q7Z6B7 1085 aa13.66□□□□□ -0.22
SLC6A6-210ENST00000622186 FRMD4BQ9Y2L6 1034 aa13.66□□□□□ -0.22
SLC6A6-210ENST00000622186 PALM3A6NDB9 673 aaPredicted RBP13.66□□□□□ -0.22
SLC6A6-210ENST00000622186 KRT19P08727 400 aa13.66□□□□□ -0.22
SLC6A6-210ENST00000622186 CALML3P27482 149 aa13.66□□□□□ -0.22
SLC6A6-210ENST00000622186 ARID4AP29374 1257 aaPredicted RBP13.66□□□□□ -0.22
SLC6A6-210ENST00000622186 CADPS2Q86UW7 1296 aa13.66□□□□□ -0.22
SLC6A6-210ENST00000622186 JAKMIP2Q96AA8 810 aa13.66□□□□□ -0.22
SLC6A6-210ENST00000622186 THUMPD2Q9BTF0 503 aaKnown RBP13.66□□□□□ -0.22
SLC6A6-210ENST00000622186 MED10Q9BTT4 135 aa13.66□□□□□ -0.22
SLC6A6-210ENST00000622186 CARD10Q9BWT7 1032 aa13.66□□□□□ -0.22
SLC6A6-210ENST00000622186 ARHGEF10LQ9HCE6 1279 aa13.66□□□□□ -0.22
SLC6A6-210ENST00000622186 CNNM2Q9H8M5 875 aa13.66□□□□□ -0.22
SLC6A6-210ENST00000622186 MOSPD1Q9UJG1 213 aa13.66□□□□□ -0.22
SLC6A6-210ENST00000622186 LRFN2Q9ULH4 789 aa13.66□□□□□ -0.22
SLC6A6-210ENST00000622186 PSMA7O14818 248 aa13.66□□□□□ -0.22
SLC6A6-210ENST00000622186 ZBTB43O43298 467 aa13.66□□□□□ -0.22
SLC6A6-210ENST00000622186 RAPGEF1Q13905 1077 aa13.66□□□□□ -0.22
SLC6A6-210ENST00000622186 MAP7Q14244 749 aa13.66□□□□□ -0.22
SLC6A6-210ENST00000622186 AMOTL2Q9Y2J4 779 aa13.66□□□□□ -0.22
SLC6A6-210ENST00000622186 BMP15O95972 392 aa13.65□□□□□ -0.22
SLC6A6-210ENST00000622186 MCM5P33992 734 aa13.65□□□□□ -0.22
SLC6A6-210ENST00000622186 TRAPPC3LQ5T215 181 aa13.65□□□□□ -0.22
SLC6A6-210ENST00000622186 ZCRB1Q8TBF4 217 aaKnown RBP13.65□□□□□ -0.22
SLC6A6-210ENST00000622186 FAM114A2Q9NRY5 505 aa13.65□□□□□ -0.22
SLC6A6-210ENST00000622186 LMCD1Q9NZU5 365 aa13.65□□□□□ -0.22
SLC6A6-210ENST00000622186 SNRPA1P09661 255 aaKnown RBP13.65□□□□□ -0.22
SLC6A6-210ENST00000622186 TMTC2Q8N394 836 aa13.65□□□□□ -0.22
SLC6A6-210ENST00000622186 LDHBP07195 334 aaKnown RBP13.65□□□□□ -0.22
SLC6A6-210ENST00000622186 CDR2Q01850 454 aa13.65□□□□□ -0.22
SLC6A6-210ENST00000622186 C1orf228Q6PIY5 440 aa13.65□□□□□ -0.22
SLC6A6-210ENST00000622186 ZBED4O75132 1171 aa13.65□□□□□ -0.22
SLC6A6-210ENST00000622186 CIB2O75838 187 aa13.65□□□□□ -0.22
SLC6A6-210ENST00000622186 XPAP23025 273 aaPredicted RBP13.65□□□□□ -0.22
SLC6A6-210ENST00000622186 MCM7P33993 719 aa13.65□□□□□ -0.22
SLC6A6-210ENST00000622186 SEL1L2Q5TEA6 688 aa13.65□□□□□ -0.22
SLC6A6-210ENST00000622186 MRRFQ96E11 262 aaKnown RBP13.65□□□□□ -0.22
SLC6A6-210ENST00000622186 KLF18A0A0U1RQI7 1052 aa13.65□□□□□ -0.22
SLC6A6-210ENST00000622186 KIF3CO14782 793 aa13.65□□□□□ -0.22
SLC6A6-210ENST00000622186 RYBPQ8N488 228 aaPredicted RBP13.65□□□□□ -0.22
SLC6A6-210ENST00000622186 ANKRD24Q8TF21 1146 aa13.65□□□□□ -0.22
SLC6A6-210ENST00000622186 STIM2Q9P246 746 aa13.65□□□□□ -0.22
SLC6A6-210ENST00000622186 POLIQ9UNA4 740 aa13.65□□□□□ -0.22
SLC6A6-210ENST00000622186 ANKRD50Q9ULJ7 1429 aa13.65□□□□□ -0.22
SLC6A6-210ENST00000622186 NAA25Q14CX7 972 aa13.64□□□□□ -0.23
SLC6A6-210ENST00000622186 FCHSD1Q86WN1 690 aa13.64□□□□□ -0.23
SLC6A6-210ENST00000622186 ANKS4BQ8N8V4 417 aa13.64□□□□□ -0.23
SLC6A6-210ENST00000622186 ZNF830Q96NB3 372 aaPredicted RBP13.64□□□□□ -0.23
SLC6A6-210ENST00000622186 ABCF3Q9NUQ8 709 aa13.64□□□□□ -0.23
SLC6A6-210ENST00000622186 ABCC8Q09428 1581 aa13.64□□□□□ -0.23
SLC6A6-210ENST00000622186 TFIP11Q9UBB9 837 aaKnown RBP13.64□□□□□ -0.23
SLC6A6-210ENST00000622186 SFMBT1Q9UHJ3 866 aa13.64□□□□□ -0.23
SLC6A6-210ENST00000622186 Q3C1V9 767 aa13.64□□□□□ -0.23
SLC6A6-210ENST00000622186 MYO15BQ96JP2 1530 aa13.64□□□□□ -0.23
SLC6A6-210ENST00000622186 TACC1O75410 805 aa13.64□□□□□ -0.23
SLC6A6-210ENST00000622186 GSDMDP57764 484 aa13.64□□□□□ -0.23
SLC6A6-210ENST00000622186 GPATCH11Q8N954 259 aa13.64□□□□□ -0.23
SLC6A6-210ENST00000622186 CEP120Q8N960 986 aa13.64□□□□□ -0.23
SLC6A6-210ENST00000622186 NEK11Q8NG66 645 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms