RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 DZIP1LQ8IYY4 767 aaKnown RBP8.45□□□□□ -1.06
BRCA1-229ENST00000621897 TCF12Q99081 682 aa8.45□□□□□ -1.06
BRCA1-229ENST00000621897 LOC100996750A0A140TA64 210 aa8.44□□□□□ -1.06
BRCA1-229ENST00000621897 EIF1AYO14602 144 aaKnown RBP8.44□□□□□ -1.06
BRCA1-229ENST00000621897 GRIA4P48058 902 aa8.44□□□□□ -1.06
BRCA1-229ENST00000621897 NLRP12P59046 1061 aa8.44□□□□□ -1.06
BRCA1-229ENST00000621897 SPRED3Q2MJR0 410 aa8.44□□□□□ -1.06
BRCA1-229ENST00000621897 TMC7Q7Z402 723 aa8.44□□□□□ -1.06
BRCA1-229ENST00000621897 CCNJLQ8IV13 435 aa8.44□□□□□ -1.06
BRCA1-229ENST00000621897 WNT8BQ93098 351 aa8.44□□□□□ -1.06
BRCA1-229ENST00000621897 KRTAP4-6Q9BYQ5 205 aa8.44□□□□□ -1.06
BRCA1-229ENST00000621897 LIN7BQ9HAP6 207 aa8.44□□□□□ -1.06
BRCA1-229ENST00000621897 NPHS2Q9NP85 383 aa8.44□□□□□ -1.06
BRCA1-229ENST00000621897 OSGEPQ9NPF4 335 aa8.44□□□□□ -1.06
BRCA1-229ENST00000621897 NEFLP07196 543 aa8.43□□□□□ -1.06
BRCA1-229ENST00000621897 H2AFB1P0C5Y9 115 aa8.43□□□□□ -1.06
BRCA1-229ENST00000621897 H2AFB2P0C5Z0 115 aa8.43□□□□□ -1.06
BRCA1-229ENST00000621897 GLB1P16278 677 aa8.43□□□□□ -1.06
BRCA1-229ENST00000621897 IKBKEQ14164 716 aa8.43□□□□□ -1.06
BRCA1-229ENST00000621897 DUOXA2Q1HG44 320 aa8.43□□□□□ -1.06
BRCA1-229ENST00000621897 ALKBH8Q96BT7 664 aaKnown RBP8.43□□□□□ -1.06
BRCA1-229ENST00000621897 DMRTB1Q96MA1 342 aa8.43□□□□□ -1.06
BRCA1-229ENST00000621897 UBL7Q96S82 380 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-229ENST00000621897 TRAIPQ9BWF2 469 aa8.43□□□□□ -1.06
BRCA1-229ENST00000621897 DCTN4Q9UJW0 460 aa8.43□□□□□ -1.06
BRCA1-229ENST00000621897 ESRRAP11474 423 aaPredicted RBP8.42□□□□□ -1.06
BRCA1-229ENST00000621897 KCNA1Q09470 495 aa8.42□□□□□ -1.06
BRCA1-229ENST00000621897 C19orf57Q0VDD7 668 aa8.42□□□□□ -1.06
BRCA1-229ENST00000621897 KIAA0319Q5VV43 1072 aa8.42□□□□□ -1.06
BRCA1-229ENST00000621897 CSRNP1Q96S65 589 aa8.42□□□□□ -1.06
BRCA1-229ENST00000621897 A0A096LPE4 126 aa8.41□□□□□ -1.06
BRCA1-229ENST00000621897 A0A1W2PPZ6 126 aa8.41□□□□□ -1.06
BRCA1-229ENST00000621897 MAPK1P28482 360 aa8.41□□□□□ -1.06
BRCA1-229ENST00000621897 PRSS36Q5K4E3 855 aa8.41□□□□□ -1.06
BRCA1-229ENST00000621897 CCDC74AQ96AQ1 378 aa8.41□□□□□ -1.06
BRCA1-229ENST00000621897 DNAJC25Q9H1X3 360 aa8.41□□□□□ -1.06
BRCA1-229ENST00000621897 EHD4Q9H223 541 aa8.4□□□□□ -1.06
BRCA1-229ENST00000621897 ARL4DP49703 201 aa8.39□□□□□ -1.07
BRCA1-229ENST00000621897 ZNF423Q2M1K9 1284 aa8.39□□□□□ -1.07
BRCA1-229ENST00000621897 EPS8L3Q8TE67 593 aaKnown RBP8.39□□□□□ -1.07
BRCA1-229ENST00000621897 PCDH1Q08174 1060 aa8.38□□□□□ -1.07
BRCA1-229ENST00000621897 DSC3Q14574 896 aa8.38□□□□□ -1.07
BRCA1-229ENST00000621897 PI16Q6UXB8 463 aa8.38□□□□□ -1.07
BRCA1-229ENST00000621897 PRR23CQ6ZRP0 262 aa8.38□□□□□ -1.07
BRCA1-229ENST00000621897 ARMC10Q8N2F6 343 aa8.38□□□□□ -1.07
BRCA1-229ENST00000621897 ABCB6Q9NP58 842 aa8.38□□□□□ -1.07
BRCA1-229ENST00000621897 LOC100289279A0A1B0GTE1 492 aa8.37□□□□□ -1.07
BRCA1-229ENST00000621897 TREHO43280 583 aa8.37□□□□□ -1.07
BRCA1-229ENST00000621897 GSTM4Q03013 218 aa8.37□□□□□ -1.07
BRCA1-229ENST00000621897 USP26Q9BXU7 913 aa8.37□□□□□ -1.07
BRCA1-229ENST00000621897 CLEC4MQ9H2X3 399 aaPredicted RBP8.37□□□□□ -1.07
BRCA1-229ENST00000621897 SOX17Q9H6I2 414 aaPredicted RBP8.37□□□□□ -1.07
BRCA1-229ENST00000621897 GADD45BO75293 160 aaPredicted RBP8.36□□□□□ -1.07
BRCA1-229ENST00000621897 DLGAP3O95886 979 aa8.36□□□□□ -1.07
BRCA1-229ENST00000621897 GLIS3Q8NEA6 775 aa8.36□□□□□ -1.07
BRCA1-229ENST00000621897 RUSC1Q9BVN2 902 aa8.36□□□□□ -1.07
BRCA1-229ENST00000621897 NRSN2Q9GZP1 204 aa8.36□□□□□ -1.07
BRCA1-229ENST00000621897 ZNF576Q9H609 170 aa8.36□□□□□ -1.07
BRCA1-229ENST00000621897 ITPKAP23677 461 aa8.35□□□□□ -1.07
BRCA1-229ENST00000621897 PREPP48147 710 aa8.35□□□□□ -1.07
BRCA1-229ENST00000621897 GRM2Q14416 872 aa8.35□□□□□ -1.07
BRCA1-229ENST00000621897 PRPF40BQ6NWY9 871 aaKnown RBP8.35□□□□□ -1.07
BRCA1-229ENST00000621897 FAM46AQ96IP4 442 aaKnown RBP8.35□□□□□ -1.07
BRCA1-229ENST00000621897 CEP41Q9BYV8 373 aa8.35□□□□□ -1.07
BRCA1-229ENST00000621897 RNF208Q9H0X6 261 aa8.35□□□□□ -1.07
BRCA1-229ENST00000621897 PNMA6FA0A0J9YX94 578 aa8.34□□□□□ -1.07
BRCA1-229ENST00000621897 CTSBP07858 339 aa8.34□□□□□ -1.07
BRCA1-229ENST00000621897 ZMYM1Q5SVZ6 1142 aa8.34□□□□□ -1.07
BRCA1-229ENST00000621897 PLCB3Q01970 1234 aa8.33□□□□□ -1.08
BRCA1-229ENST00000621897 ENOX2Q16206 610 aaKnown RBP8.33□□□□□ -1.08
BRCA1-229ENST00000621897 UTP4Q969X6 686 aaKnown RBP8.33□□□□□ -1.08
BRCA1-229ENST00000621897 SETDB2Q96T68 719 aa8.33□□□□□ -1.08
BRCA1-229ENST00000621897 TMPRSS13Q9BYE2 586 aa8.33□□□□□ -1.08
BRCA1-229ENST00000621897 TMEM238LA0A1B0GVL6 79 aa8.32□□□□□ -1.08
BRCA1-229ENST00000621897 MEGF11A6BM72 1044 aa8.32□□□□□ -1.08
BRCA1-229ENST00000621897 B3GALT4O96024 378 aa8.32□□□□□ -1.08
BRCA1-229ENST00000621897 MYRFLQ96LU7 910 aa8.32□□□□□ -1.08
BRCA1-229ENST00000621897 ASB16Q96NS5 453 aa8.32□□□□□ -1.08
BRCA1-229ENST00000621897 TRIM56Q9BRZ2 755 aaKnown RBP8.32□□□□□ -1.08
BRCA1-229ENST00000621897 RAXQ9Y2V3 346 aa8.32□□□□□ -1.08
BRCA1-229ENST00000621897 ECEL1O95672 775 aa8.31□□□□□ -1.08
BRCA1-229ENST00000621897 FMR1Q06787 632 aaKnown RBP eCLIP8.31□□□□□ -1.08
BRCA1-229ENST00000621897 FAAP100Q0VG06 881 aa8.31□□□□□ -1.08
BRCA1-229ENST00000621897 UVSSAQ2YD98 709 aa8.31□□□□□ -1.08
BRCA1-229ENST00000621897 ANKRD34AQ69YU3 496 aa8.31□□□□□ -1.08
BRCA1-229ENST00000621897 FDX2Q6P4F2 183 aa8.31□□□□□ -1.08
BRCA1-229ENST00000621897 DHX15O43143 795 aaKnown RBP8.3□□□□□ -1.08
BRCA1-229ENST00000621897 FSTP19883 344 aa8.3□□□□□ -1.08
BRCA1-229ENST00000621897 MAPK8P45983 427 aa8.3□□□□□ -1.08
BRCA1-229ENST00000621897 PTPN12Q05209 780 aaKnown RBP8.3□□□□□ -1.08
BRCA1-229ENST00000621897 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.3□□□□□ -1.08
BRCA1-229ENST00000621897 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.3□□□□□ -1.08
BRCA1-229ENST00000621897 AEBP1Q8IUX7 1158 aa8.3□□□□□ -1.08
BRCA1-229ENST00000621897 Q8N3U1 123 aa8.3□□□□□ -1.08
BRCA1-229ENST00000621897 BCO2Q9BYV7 579 aa8.3□□□□□ -1.08
BRCA1-229ENST00000621897 NLRP2Q9NX02 1062 aa8.3□□□□□ -1.08
BRCA1-229ENST00000621897 WWC3Q9ULE0 1092 aa8.3□□□□□ -1.08
BRCA1-229ENST00000621897 TRAK1Q9UPV9 953 aa8.3□□□□□ -1.08
BRCA1-229ENST00000621897 SART1O43290 800 aaKnown RBP8.29□□□□□ -1.08
BRCA1-229ENST00000621897 MAOBP27338 520 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms