RNA–Protein interactions for RNA: ENST00000620040.4

DMD-230, Transcript of dystrophin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene DMD, Length 13,746 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-230ENST00000620040 PHACTR2O75167 634 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 WDHD1O75717 1129 aaPredicted RBP4.73□□□□□ -1.65
DMD-230ENST00000620040 USP6NLQ92738 828 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 TRAK1Q9UPV9 953 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 MBD5Q9P267 1494 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 ANKRD12Q6UB98 2062 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 SSRP1Q08945 709 aaKnown RBP4.73□□□□□ -1.65
DMD-230ENST00000620040 EXOC1Q9NV70 894 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 NBPF7P0C2Y1 421 aaPredicted RBP4.73□□□□□ -1.65
DMD-230ENST00000620040 TYRO3Q06418 890 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 CLEC17AQ6ZS10 378 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 STAG1Q8WVM7 1258 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 UBLCP1Q8WVY7 318 aaPredicted RBP4.73□□□□□ -1.65
DMD-230ENST00000620040 TRIM47Q96LD4 638 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 COMMD10Q9Y6G5 202 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.73□□□□□ -1.65
DMD-230ENST00000620040 IL16Q14005 1332 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 FAM177BA6PVY3 158 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 U2AF2P26368 475 aaKnown RBP eCLIP4.73□□□□□ -1.654e-6■■□□□ 13.2
DMD-230ENST00000620040 KIF6Q6ZMV9 814 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 ARHGEF2Q92974 986 aaKnown RBP4.73□□□□□ -1.65
DMD-230ENST00000620040 HAUS8Q9BT25 410 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 KNL1Q8NG31 2342 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 RIOK3O14730 519 aaKnown RBP4.73□□□□□ -1.65
DMD-230ENST00000620040 VIMP08670 466 aaKnown RBP4.73□□□□□ -1.65
DMD-230ENST00000620040 C8orf74Q6P047 294 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 DRC3Q9H069 523 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 TPX2Q9ULW0 747 aaKnown RBP4.73□□□□□ -1.65
DMD-230ENST00000620040 CAPN7Q9Y6W3 813 aa4.73□□□□□ -1.65
DMD-230ENST00000620040 PPP1R2P41236 205 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 SYKP43405 635 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 FERMT2Q96AC1 680 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 INTS4Q96HW7 963 aaKnown RBP4.72□□□□□ -1.65
DMD-230ENST00000620040 RNF41Q9H4P4 317 aaPredicted RBP4.72□□□□□ -1.65
DMD-230ENST00000620040 EHMT1Q9H9B1 1298 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 NCOA3Q9Y6Q9 1424 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 ERBB4Q15303 1308 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 SCAF11Q99590 1463 aaKnown RBP4.72□□□□□ -1.65
DMD-230ENST00000620040 C20orf194Q5TEA3 1177 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 PDLIM2Q96JY6 352 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 RRP15Q9Y3B9 282 aaKnown RBP4.72□□□□□ -1.65
DMD-230ENST00000620040 RHOXF2BP0C7M4 288 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 SLFNL1Q499Z3 407 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 RHOXF2Q9BQY4 288 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 ADGRL1O94910 1474 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 ZNF131P52739 623 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 VPS52Q8N1B4 723 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 CEP170Q5SW79 1584 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 PPP2R5AQ15172 486 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 GGT6Q6P531 493 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 PNMA8AQ86V59 439 aaPredicted RBP4.72□□□□□ -1.65
DMD-230ENST00000620040 VSIG1Q86XK7 387 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 CCHCR1Q8TD31 782 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 TMX1Q9H3N1 280 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 BCL2L12Q9HB09 334 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 PPP1R9AQ9ULJ8 1098 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 UTP11Q9Y3A2 253 aaKnown RBP4.72□□□□□ -1.65
DMD-230ENST00000620040 RIPOR2Q9Y4F9 1068 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 MYH7P12883 1935 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 MICAL3Q7RTP6 2002 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 A0A087WUV0 522 aaPredicted RBP4.72□□□□□ -1.65
DMD-230ENST00000620040 I3L4J1 428 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 SEPT2Q15019 361 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 LTV1Q96GA3 475 aaPredicted RBP4.72□□□□□ -1.65
DMD-230ENST00000620040 EPSTI1Q96J88 318 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 BAG1Q99933 345 aaPredicted RBP4.72□□□□□ -1.65
DMD-230ENST00000620040 C1orf115Q9H7X2 142 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 CEP152O94986 1710 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 RNF40O75150 1001 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 CCDC170Q8IYT3 715 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 TMEM57Q8N5G2 664 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 AOPEPQ8N6M6 819 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 CCDC63Q8NA47 563 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 CENPKQ9BS16 269 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 RBM27Q9P2N5 1060 aaKnown RBP4.72□□□□□ -1.65
DMD-230ENST00000620040 PRPF40BQ6NWY9 871 aaKnown RBP4.72□□□□□ -1.65
DMD-230ENST00000620040 NCAPGQ9BPX3 1015 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 PPP1R1BQ9UD71 204 aaPredicted RBP4.72□□□□□ -1.65
DMD-230ENST00000620040 PRDM15P57071 1507 aaPredicted RBP4.72□□□□□ -1.65
DMD-230ENST00000620040 CCDC194A0A1B0GVG4 234 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 ZNF76P36508 570 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 SYT10Q6XYQ8 523 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 IFT81Q8WYA0 676 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 JRKLQ9Y4A0 524 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 ATP10AO60312 1499 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 HPDP32754 393 aaPredicted RBP4.72□□□□□ -1.65
DMD-230ENST00000620040 PRIM1P49642 420 aaKnown RBP4.72□□□□□ -1.65
DMD-230ENST00000620040 ZC3H6P61129 1189 aaKnown RBP4.72□□□□□ -1.65
DMD-230ENST00000620040 CCDC42Q96M95 316 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 PARP2Q9UGN5 583 aa4.72□□□□□ -1.65
DMD-230ENST00000620040 CHD2O14647 1828 aaKnown RBP4.71□□□□□ -1.65
DMD-230ENST00000620040 PSMA7O14818 248 aa4.71□□□□□ -1.65
DMD-230ENST00000620040 F13A1P00488 732 aa4.71□□□□□ -1.65
DMD-230ENST00000620040 PTGS1P23219 599 aa4.71□□□□□ -1.65
DMD-230ENST00000620040 PEX19P40855 299 aa4.71□□□□□ -1.65
DMD-230ENST00000620040 DEUP1Q05D60 604 aa4.71□□□□□ -1.65
DMD-230ENST00000620040 KCNK9Q9NPC2 374 aa4.71□□□□□ -1.65
DMD-230ENST00000620040 MYH1P12882 1939 aa4.71□□□□□ -1.65
DMD-230ENST00000620040 MYH2Q9UKX2 1941 aa4.71□□□□□ -1.65
DMD-230ENST00000620040 MYH4Q9Y623 1939 aa4.71□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms