RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 EXOSC10Q01780 885 aaKnown RBP22.61■■□□□ 1.21
PSPC1-206ENST00000619300 IMMTQ16891 758 aaKnown RBP22.61■■□□□ 1.21
PSPC1-206ENST00000619300 WWC3Q9ULE0 1092 aa22.61■■□□□ 1.21
PSPC1-206ENST00000619300 COL4A1P02462 1669 aa22.61■■□□□ 1.21
PSPC1-206ENST00000619300 MAP3K12Q12852 859 aa22.6■■□□□ 1.21
PSPC1-206ENST00000619300 KLHL40Q2TBA0 621 aa22.6■■□□□ 1.21
PSPC1-206ENST00000619300 DDX49Q9Y6V7 483 aaKnown RBP22.6■■□□□ 1.21
PSPC1-206ENST00000619300 PRPF40AO75400 957 aaKnown RBP22.59■■□□□ 1.21
PSPC1-206ENST00000619300 ZSCAN22P10073 491 aaPredicted RBP22.59■■□□□ 1.21
PSPC1-206ENST00000619300 SLC27A3Q5K4L6 730 aa22.59■■□□□ 1.21
PSPC1-206ENST00000619300 CHAMP1Q96JM3 812 aa22.59■■□□□ 1.21
PSPC1-206ENST00000619300 FGD1P98174 961 aa22.58■■□□□ 1.21
PSPC1-206ENST00000619300 COL24A1Q17RW2 1714 aa22.58■■□□□ 1.21
PSPC1-206ENST00000619300 CCDC24Q8N4L8 307 aa22.58■■□□□ 1.21
PSPC1-206ENST00000619300 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.57■■□□□ 1.2
PSPC1-206ENST00000619300 PDIA4P13667 645 aaKnown RBP22.57■■□□□ 1.2
PSPC1-206ENST00000619300 NFIXQ14938 502 aa22.57■■□□□ 1.2
PSPC1-206ENST00000619300 BRF1Q92994 677 aa22.57■■□□□ 1.2
PSPC1-206ENST00000619300 LRRC2Q9BYS8 371 aa22.57■■□□□ 1.2
PSPC1-206ENST00000619300 AGXT2Q9BYV1 514 aa22.57■■□□□ 1.2
PSPC1-206ENST00000619300 GNL3LQ9NVN8 582 aaKnown RBP22.57■■□□□ 1.2
PSPC1-206ENST00000619300 MYH7P12883 1935 aa22.57■■□□□ 1.2
PSPC1-206ENST00000619300 ZNF804BA4D1E1 1349 aa22.57■■□□□ 1.2
PSPC1-206ENST00000619300 NPHP1O15259 732 aa22.57■■□□□ 1.2
PSPC1-206ENST00000619300 TRIM37O94972 964 aa22.57■■□□□ 1.2
PSPC1-206ENST00000619300 TM4SF1P30408 202 aa22.57■■□□□ 1.2
PSPC1-206ENST00000619300 STK3Q13188 491 aa22.57■■□□□ 1.2
PSPC1-206ENST00000619300 MAGEB6Q8N7X4 407 aa22.57■■□□□ 1.2
PSPC1-206ENST00000619300 WTIPA6NIX2 430 aaPredicted RBP22.56■■□□□ 1.2
PSPC1-206ENST00000619300 ZNF213O14771 459 aa22.56■■□□□ 1.2
PSPC1-206ENST00000619300 HAND2P61296 217 aa22.56■■□□□ 1.2
PSPC1-206ENST00000619300 STRBPQ96SI9 672 aaKnown RBP22.56■■□□□ 1.2
PSPC1-206ENST00000619300 CARMIL3Q8ND23 1372 aa22.56■■□□□ 1.2
PSPC1-206ENST00000619300 GYG1P46976 350 aa22.55■■□□□ 1.2
PSPC1-206ENST00000619300 CAVIN4Q5BKX8 364 aa22.55■■□□□ 1.2
PSPC1-206ENST00000619300 GTF3C6Q969F1 213 aa22.55■■□□□ 1.2
PSPC1-206ENST00000619300 AIDAQ96BJ3 306 aa22.55■■□□□ 1.2
PSPC1-206ENST00000619300 DTNBO60941 627 aa22.55■■□□□ 1.2
PSPC1-206ENST00000619300 ANKRD2Q9GZV1 360 aa22.55■■□□□ 1.2
PSPC1-206ENST00000619300 FBXL16Q8N461 479 aa22.54■■□□□ 1.2
PSPC1-206ENST00000619300 MTMR6Q9Y217 621 aa22.54■■□□□ 1.2
PSPC1-206ENST00000619300 F13A1P00488 732 aa22.53■■□□□ 1.2
PSPC1-206ENST00000619300 APPP05067 770 aa22.53■■□□□ 1.2
PSPC1-206ENST00000619300 PDCP20941 246 aa22.53■■□□□ 1.2
PSPC1-206ENST00000619300 LARP1BQ659C4 914 aaKnown RBP22.53■■□□□ 1.2
PSPC1-206ENST00000619300 LRP2BPQ9P2M1 347 aa22.53■■□□□ 1.2
PSPC1-206ENST00000619300 PFKFB2O60825 505 aa22.53■■□□□ 1.2
PSPC1-206ENST00000619300 ALX1Q15699 326 aa22.53■■□□□ 1.2
PSPC1-206ENST00000619300 CNBD1Q8NA66 436 aa22.53■■□□□ 1.2
PSPC1-206ENST00000619300 FAM84BQ96KN1 310 aaPredicted RBP22.53■■□□□ 1.2
PSPC1-206ENST00000619300 ATP6V1DQ9Y5K8 247 aa22.53■■□□□ 1.2
PSPC1-206ENST00000619300 TAF1P21675 1872 aa22.52■■□□□ 1.2
PSPC1-206ENST00000619300 C4AP0C0L4 1744 aa22.52■■□□□ 1.2
PSPC1-206ENST00000619300 FSD2A1L4K1 749 aa22.52■■□□□ 1.2
PSPC1-206ENST00000619300 PATL2C9JE40 543 aaKnown RBP22.52■■□□□ 1.2
PSPC1-206ENST00000619300 FOXD4L6Q3SYB3 417 aaPredicted RBP22.52■■□□□ 1.2
PSPC1-206ENST00000619300 FOXD4L3Q6VB84 417 aaPredicted RBP22.52■■□□□ 1.2
PSPC1-206ENST00000619300 VPS37DQ86XT2 251 aa22.52■■□□□ 1.2
PSPC1-206ENST00000619300 IQSEC3Q9UPP2 1182 aaPredicted RBP22.52■■□□□ 1.2
PSPC1-206ENST00000619300 GOLGA6L3A6NEY3 463 aa22.52■■□□□ 1.19
PSPC1-206ENST00000619300 FBXO33Q7Z6M2 555 aa22.52■■□□□ 1.19
PSPC1-206ENST00000619300 NCOA7Q8NI08 942 aa22.52■■□□□ 1.19
PSPC1-206ENST00000619300 MYO5AQ9Y4I1 1855 aaKnown RBP22.51■■□□□ 1.19
PSPC1-206ENST00000619300 GYS1P13807 737 aa22.51■■□□□ 1.19
PSPC1-206ENST00000619300 APOBRQ0VD83 1088 aa22.51■■□□□ 1.19
PSPC1-206ENST00000619300 CHST3Q7LGC8 479 aa22.51■■□□□ 1.19
PSPC1-206ENST00000619300 MBD4O95243 580 aa22.5■■□□□ 1.19
PSPC1-206ENST00000619300 NCLP19338 710 aaKnown RBP22.5■■□□□ 1.19
PSPC1-206ENST00000619300 HMGB2P26583 209 aaKnown RBP22.5■■□□□ 1.19
PSPC1-206ENST00000619300 MCM5P33992 734 aa22.5■■□□□ 1.19
PSPC1-206ENST00000619300 SCRN1Q12765 414 aa22.5■■□□□ 1.19
PSPC1-206ENST00000619300 L1TD1Q5T7N2 865 aaKnown RBP22.5■■□□□ 1.19
PSPC1-206ENST00000619300 MB21D2Q8IYB1 491 aaPredicted RBP22.5■■□□□ 1.19
PSPC1-206ENST00000619300 GPT2Q8TD30 523 aa22.5■■□□□ 1.19
PSPC1-206ENST00000619300 DENND2AQ9ULE3 1009 aa22.5■■□□□ 1.19
PSPC1-206ENST00000619300 CASZ1Q86V15 1759 aa22.5■■□□□ 1.19
PSPC1-206ENST00000619300 RBM6P78332 1123 aaKnown RBP22.5■■□□□ 1.19
PSPC1-206ENST00000619300 ZNF274Q96GC6 653 aaPredicted RBP22.5■■□□□ 1.19
PSPC1-206ENST00000619300 LLPHQ9BRT6 129 aaKnown RBP22.5■■□□□ 1.19
PSPC1-206ENST00000619300 LAMA4Q16363 1823 aa22.5■■□□□ 1.19
PSPC1-206ENST00000619300 VPS37CA5D8V6 355 aaPredicted RBP22.49■■□□□ 1.19
PSPC1-206ENST00000619300 ZNF772Q68DY9 489 aaPredicted RBP22.49■■□□□ 1.19
PSPC1-206ENST00000619300 RALYLQ86SE5 291 aaKnown RBP22.49■■□□□ 1.19
PSPC1-206ENST00000619300 NBPF3Q9H094 633 aa22.49■■□□□ 1.19
PSPC1-206ENST00000619300 ARMT1Q9H993 441 aa22.49■■□□□ 1.19
PSPC1-206ENST00000619300 SEMA3EO15041 775 aa22.48■■□□□ 1.19
PSPC1-206ENST00000619300 EVCP57679 992 aa22.48■■□□□ 1.19
PSPC1-206ENST00000619300 PRR5LQ6MZQ0 368 aa22.48■■□□□ 1.19
PSPC1-206ENST00000619300 PROM2Q8N271 834 aa22.48■■□□□ 1.19
PSPC1-206ENST00000619300 ABCF2Q9UG63 623 aa22.48■■□□□ 1.19
PSPC1-206ENST00000619300 ZMYM6O95789 1325 aa22.48■■□□□ 1.19
PSPC1-206ENST00000619300 DOCK2Q92608 1830 aa22.48■■□□□ 1.19
PSPC1-206ENST00000619300 PRC1O43663 620 aa22.48■■□□□ 1.19
PSPC1-206ENST00000619300 GNAT2P19087 354 aa22.48■■□□□ 1.19
PSPC1-206ENST00000619300 TXNRD1Q16881 649 aa22.48■■□□□ 1.19
PSPC1-206ENST00000619300 BRWD3Q6RI45 1802 aa22.48■■□□□ 1.19
PSPC1-206ENST00000619300 PNPLA7Q6ZV29 1317 aa22.48■■□□□ 1.19
PSPC1-206ENST00000619300 IFNL3Q8IZI9 196 aa22.48■■□□□ 1.19
PSPC1-206ENST00000619300 ISY1Q9ULR0 285 aaKnown RBP22.48■■□□□ 1.19
PSPC1-206ENST00000619300 WDR19Q8NEZ3 1342 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms