RNA–Protein interactions for RNA: ENST00000619146.1

SYN3-213, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-213ENST00000619146 EN2P19622 333 aaPredicted RBP11.57□□□□□ -0.56
SYN3-213ENST00000619146 KLRK1P26718 216 aa11.57□□□□□ -0.56
SYN3-213ENST00000619146 CCT4P50991 539 aaKnown RBP11.57□□□□□ -0.56
SYN3-213ENST00000619146 SREBF2Q12772 1141 aa11.57□□□□□ -0.56
SYN3-213ENST00000619146 C20orf194Q5TEA3 1177 aa11.57□□□□□ -0.56
SYN3-213ENST00000619146 KSR2Q6VAB6 950 aa11.57□□□□□ -0.56
SYN3-213ENST00000619146 TXNRD3Q86VQ6 643 aa11.57□□□□□ -0.56
SYN3-213ENST00000619146 KIAA0825Q8IV33 1275 aa11.57□□□□□ -0.56
SYN3-213ENST00000619146 CLUAP1Q96AJ1 413 aa11.57□□□□□ -0.56
SYN3-213ENST00000619146 CLMNQ96JQ2 1002 aa11.57□□□□□ -0.56
SYN3-213ENST00000619146 PCDHAC2Q9Y5I4 1007 aa11.57□□□□□ -0.56
SYN3-213ENST00000619146 ZNF609O15014 1411 aa11.57□□□□□ -0.56
SYN3-213ENST00000619146 MGAMO43451 1857 aa11.56□□□□□ -0.56
SYN3-213ENST00000619146 PDE8AO60658 829 aa11.56□□□□□ -0.56
SYN3-213ENST00000619146 RLBP1P12271 317 aa11.56□□□□□ -0.56
SYN3-213ENST00000619146 ATP2B4P23634 1241 aa11.56□□□□□ -0.56
SYN3-213ENST00000619146 IRX6P78412 446 aaPredicted RBP11.56□□□□□ -0.56
SYN3-213ENST00000619146 MVPQ14764 893 aaKnown RBP11.56□□□□□ -0.56
SYN3-213ENST00000619146 DACT2Q5SW24 774 aa11.56□□□□□ -0.56
SYN3-213ENST00000619146 SPRYD7Q5W111 196 aa11.56□□□□□ -0.56
SYN3-213ENST00000619146 INTS3Q68E01 1043 aaKnown RBP11.56□□□□□ -0.56
SYN3-213ENST00000619146 OTOP1Q7RTM1 612 aa11.56□□□□□ -0.56
SYN3-213ENST00000619146 ARMC9Q7Z3E5 817 aa11.56□□□□□ -0.56
SYN3-213ENST00000619146 OGFOD1Q8N543 542 aa11.56□□□□□ -0.56
SYN3-213ENST00000619146 CD99L2Q8TCZ2 262 aa11.56□□□□□ -0.56
SYN3-213ENST00000619146 GCC1Q96CN9 775 aa11.56□□□□□ -0.56
SYN3-213ENST00000619146 CRBNQ96SW2 442 aa11.56□□□□□ -0.56
SYN3-213ENST00000619146 DDX19BQ9UMR2 479 aa11.56□□□□□ -0.56
SYN3-213ENST00000619146 CACNA1FO60840 1977 aa11.56□□□□□ -0.56
SYN3-213ENST00000619146 MYH13Q9UKX3 1938 aa11.55□□□□□ -0.56
SYN3-213ENST00000619146 PI4KAP2A4QPH2 592 aa11.55□□□□□ -0.56
SYN3-213ENST00000619146 ECM2O94769 699 aaPredicted RBP11.55□□□□□ -0.56
SYN3-213ENST00000619146 CAP1Q01518 475 aa11.55□□□□□ -0.56
SYN3-213ENST00000619146 PODNQ7Z5L7 613 aa11.55□□□□□ -0.56
SYN3-213ENST00000619146 ITPRIPQ8IWB1 547 aa11.55□□□□□ -0.56
SYN3-213ENST00000619146 TMEM57Q8N5G2 664 aa11.55□□□□□ -0.56
SYN3-213ENST00000619146 PI4KAP1Q8N8J0 262 aa11.55□□□□□ -0.56
SYN3-213ENST00000619146 DNAAF4Q8WXU2 420 aa11.55□□□□□ -0.56
SYN3-213ENST00000619146 COG6Q9Y2V7 657 aa11.55□□□□□ -0.56
SYN3-213ENST00000619146 GTF3C3Q9Y5Q9 886 aa11.55□□□□□ -0.56
SYN3-213ENST00000619146 SSC5DA1L4H1 1573 aa11.54□□□□□ -0.56
SYN3-213ENST00000619146 F6X3S4 739 aa11.54□□□□□ -0.56
SYN3-213ENST00000619146 F8W031 263 aaPredicted RBP11.54□□□□□ -0.56
SYN3-213ENST00000619146 IGF2BP3O00425 579 aaKnown RBP eCLIP11.54□□□□□ -0.56
SYN3-213ENST00000619146 PCCAP05165 728 aaPredicted RBP11.54□□□□□ -0.56
SYN3-213ENST00000619146 NEXNQ0ZGT2 675 aa11.54□□□□□ -0.56
SYN3-213ENST00000619146 TRIM28Q13263 835 aaKnown RBP11.54□□□□□ -0.56
SYN3-213ENST00000619146 SLC4A10Q6U841 1118 aa11.54□□□□□ -0.56
SYN3-213ENST00000619146 IFNL1Q8IU54 200 aa11.54□□□□□ -0.56
SYN3-213ENST00000619146 SLC10A4Q96EP9 437 aa11.54□□□□□ -0.56
SYN3-213ENST00000619146 GREM2Q9H772 168 aa11.54□□□□□ -0.56
SYN3-213ENST00000619146 CWC25Q9NXE8 425 aaPredicted RBP11.54□□□□□ -0.56
SYN3-213ENST00000619146 JAG2Q9Y219 1238 aa11.54□□□□□ -0.56
SYN3-213ENST00000619146 MAP3K2Q9Y2U5 619 aa11.54□□□□□ -0.56
SYN3-213ENST00000619146 ARAP2Q8WZ64 1704 aa11.54□□□□□ -0.56
SYN3-213ENST00000619146 MED23Q9ULK4 1368 aa11.54□□□□□ -0.56
SYN3-213ENST00000619146 CLRN2A0PK11 232 aa11.53□□□□□ -0.56
SYN3-213ENST00000619146 FXR1P51114 621 aaKnown RBP eCLIP11.53□□□□□ -0.56
SYN3-213ENST00000619146 CTSWP56202 376 aa11.53□□□□□ -0.56
SYN3-213ENST00000619146 GTF2IP78347 998 aa11.53□□□□□ -0.56
SYN3-213ENST00000619146 TTLL5Q6EMB2 1281 aa11.53□□□□□ -0.56
SYN3-213ENST00000619146 EXOC6Q8TAG9 804 aa11.53□□□□□ -0.56
SYN3-213ENST00000619146 WNK4Q96J92 1243 aa11.53□□□□□ -0.56
SYN3-213ENST00000619146 METTL22Q9BUU2 404 aaPredicted RBP11.53□□□□□ -0.56
SYN3-213ENST00000619146 MINPP1Q9UNW1 487 aa11.53□□□□□ -0.56
SYN3-213ENST00000619146 TNNQ9UQP3 1299 aa11.53□□□□□ -0.56
SYN3-213ENST00000619146 AOX1Q06278 1338 aa11.53□□□□□ -0.56
SYN3-213ENST00000619146 SNAP23O00161 211 aa11.52□□□□□ -0.57
SYN3-213ENST00000619146 ALDH1L1O75891 902 aa11.52□□□□□ -0.57
SYN3-213ENST00000619146 CRHR2Q13324 411 aa11.52□□□□□ -0.57
SYN3-213ENST00000619146 LDLRAD1Q5T700 205 aa11.52□□□□□ -0.57
SYN3-213ENST00000619146 APOBEC3FQ8IUX4 373 aaKnown RBP11.52□□□□□ -0.57
SYN3-213ENST00000619146 CCDC191Q8NCU4 936 aa11.52□□□□□ -0.57
SYN3-213ENST00000619146 LINS1Q8NG48 757 aa11.52□□□□□ -0.57
SYN3-213ENST00000619146 CDC5LQ99459 802 aaKnown RBP11.52□□□□□ -0.57
SYN3-213ENST00000619146 SRCIN1Q9C0H9 1055 aa11.52□□□□□ -0.57
SYN3-213ENST00000619146 HDAC5Q9UQL6 1122 aa11.52□□□□□ -0.57
SYN3-213ENST00000619146 COLQQ9Y215 455 aaPredicted RBP11.52□□□□□ -0.57
SYN3-213ENST00000619146 PTPN22Q9Y2R2 807 aa11.52□□□□□ -0.57
SYN3-213ENST00000619146 DOCK3Q8IZD9 2030 aa11.52□□□□□ -0.57
SYN3-213ENST00000619146 MANSC4A6NHS7 340 aaPredicted RBP11.51□□□□□ -0.57
SYN3-213ENST00000619146 GJA5P36382 358 aa11.51□□□□□ -0.57
SYN3-213ENST00000619146 CWF19L2Q2TBE0 894 aaKnown RBP11.51□□□□□ -0.57
SYN3-213ENST00000619146 NOM1Q5C9Z4 860 aaKnown RBP11.51□□□□□ -0.57
SYN3-213ENST00000619146 BEND3Q5T5X7 828 aa11.51□□□□□ -0.57
SYN3-213ENST00000619146 STRIP1Q5VSL9 837 aa11.51□□□□□ -0.57
SYN3-213ENST00000619146 TTLL11Q8NHH1 800 aa11.51□□□□□ -0.57
SYN3-213ENST00000619146 DEFB129Q9H1M3 183 aa11.51□□□□□ -0.57
SYN3-213ENST00000619146 VEZTQ9HBM0 779 aa11.51□□□□□ -0.57
SYN3-213ENST00000619146 ZBTB7BO15156 539 aaPredicted RBP11.5□□□□□ -0.57
SYN3-213ENST00000619146 ALDH1A1P00352 501 aa11.5□□□□□ -0.57
SYN3-213ENST00000619146 GNAI3P08754 354 aa11.5□□□□□ -0.57
SYN3-213ENST00000619146 HSP90B1P14625 803 aaKnown RBP11.5□□□□□ -0.57
SYN3-213ENST00000619146 DLGAP5Q15398 846 aa11.5□□□□□ -0.57
SYN3-213ENST00000619146 NBPF12Q5TAG4 269 aaPredicted RBP11.5□□□□□ -0.57
SYN3-213ENST00000619146 CFHR5Q9BXR6 569 aa11.5□□□□□ -0.57
SYN3-213ENST00000619146 COA1Q9GZY4 146 aa11.5□□□□□ -0.57
SYN3-213ENST00000619146 EFCC1Q9HA90 598 aa11.5□□□□□ -0.57
SYN3-213ENST00000619146 PPP4R2Q9NY27 417 aa11.5□□□□□ -0.57
SYN3-213ENST00000619146 MYO3BQ8WXR4 1341 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms