RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 FOXO4P98177 505 aa8.2□□□□□ -1.1
SRGAP3-213ENST00000618999 TFCP2Q12800 502 aa8.2□□□□□ -1.1
SRGAP3-213ENST00000618999 CAMK4Q16566 473 aa8.2□□□□□ -1.1
SRGAP3-213ENST00000618999 IFFO2Q5TF58 517 aa8.2□□□□□ -1.1
SRGAP3-213ENST00000618999 FAM200AQ8TCP9 573 aa8.2□□□□□ -1.1
SRGAP3-213ENST00000618999 UTP14AQ9BVJ6 771 aaKnown RBP8.2□□□□□ -1.1
SRGAP3-213ENST00000618999 ECHDC1Q9NTX5 307 aa8.2□□□□□ -1.1
SRGAP3-213ENST00000618999 AOX1Q06278 1338 aa8.2□□□□□ -1.1
SRGAP3-213ENST00000618999 GLRX3O76003 335 aaKnown RBP8.2□□□□□ -1.1
SRGAP3-213ENST00000618999 RABL6Q3YEC7 729 aaPredicted RBP8.2□□□□□ -1.1
SRGAP3-213ENST00000618999 GORABQ5T7V8 394 aa8.2□□□□□ -1.1
SRGAP3-213ENST00000618999 PRPF40BQ6NWY9 871 aaKnown RBP8.2□□□□□ -1.1
SRGAP3-213ENST00000618999 FERMT3Q86UX7 667 aa8.2□□□□□ -1.1
SRGAP3-213ENST00000618999 EAF2Q96CJ1 260 aaPredicted RBP8.2□□□□□ -1.1
SRGAP3-213ENST00000618999 MFRPQ9BY79 579 aa8.2□□□□□ -1.1
SRGAP3-213ENST00000618999 CEP126Q9P2H0 1117 aa8.2□□□□□ -1.1
SRGAP3-213ENST00000618999 RXRBP28702 533 aa8.2□□□□□ -1.1
SRGAP3-213ENST00000618999 DDX27Q96GQ7 796 aaKnown RBP8.2□□□□□ -1.1
SRGAP3-213ENST00000618999 C16orf45Q96MC5 204 aaPredicted RBP8.2□□□□□ -1.1
SRGAP3-213ENST00000618999 BCL2L12Q9HB09 334 aa8.2□□□□□ -1.1
SRGAP3-213ENST00000618999 CNNM1Q9NRU3 951 aa8.2□□□□□ -1.1
SRGAP3-213ENST00000618999 SH3TC1Q8TE82 1336 aa8.19□□□□□ -1.1
SRGAP3-213ENST00000618999 RAD50Q92878 1312 aa8.19□□□□□ -1.1
SRGAP3-213ENST00000618999 RFC4P35249 363 aa8.19□□□□□ -1.1
SRGAP3-213ENST00000618999 SUSD4Q5VX71 490 aa8.19□□□□□ -1.1
SRGAP3-213ENST00000618999 SPATA32Q96LK8 384 aa8.19□□□□□ -1.1
SRGAP3-213ENST00000618999 BOLA2Q9H3K6 86 aa8.19□□□□□ -1.1
SRGAP3-213ENST00000618999 CAMTA2O94983 1202 aa8.19□□□□□ -1.1
SRGAP3-213ENST00000618999 LDHAL6AQ6ZMR3 332 aa8.19□□□□□ -1.1
SRGAP3-213ENST00000618999 SCAND2PQ9GZW5 306 aaPredicted RBP8.19□□□□□ -1.1
SRGAP3-213ENST00000618999 SNX14Q9Y5W7 946 aa8.19□□□□□ -1.1
SRGAP3-213ENST00000618999 ITGB4P16144 1822 aa8.19□□□□□ -1.1
SRGAP3-213ENST00000618999 ATRNO75882 1429 aa8.19□□□□□ -1.1
SRGAP3-213ENST00000618999 COL15A1P39059 1388 aa8.19□□□□□ -1.1
SRGAP3-213ENST00000618999 ANKRD18BA2A2Z9 1011 aa8.19□□□□□ -1.1
SRGAP3-213ENST00000618999 ANKRD1Q15327 319 aa8.19□□□□□ -1.1
SRGAP3-213ENST00000618999 PARP10Q53GL7 1025 aa8.19□□□□□ -1.1
SRGAP3-213ENST00000618999 USPL1Q5W0Q7 1092 aa8.19□□□□□ -1.1
SRGAP3-213ENST00000618999 CKAP2LQ8IYA6 745 aa8.19□□□□□ -1.1
SRGAP3-213ENST00000618999 TMEM87AQ8NBN3 555 aa8.19□□□□□ -1.1
SRGAP3-213ENST00000618999 STAP2Q9UGK3 403 aa8.19□□□□□ -1.1
SRGAP3-213ENST00000618999 NAP1L2Q9ULW6 460 aaPredicted RBP8.19□□□□□ -1.1
SRGAP3-213ENST00000618999 DOT1LQ8TEK3 1739 aa8.19□□□□□ -1.1
SRGAP3-213ENST00000618999 EYA2O00167 538 aa8.18□□□□□ -1.1
SRGAP3-213ENST00000618999 HIP1O00291 1037 aa8.18□□□□□ -1.1
SRGAP3-213ENST00000618999 SGSM2O43147 1006 aa8.18□□□□□ -1.1
SRGAP3-213ENST00000618999 TNNT1P13805 278 aa8.18□□□□□ -1.1
SRGAP3-213ENST00000618999 IL15P40933 162 aaPredicted RBP8.18□□□□□ -1.1
SRGAP3-213ENST00000618999 RFX5P48382 616 aaPredicted RBP8.18□□□□□ -1.1
SRGAP3-213ENST00000618999 DMTNQ08495 405 aa8.18□□□□□ -1.1
SRGAP3-213ENST00000618999 LRRC24Q50LG9 513 aa8.18□□□□□ -1.1
SRGAP3-213ENST00000618999 TRAPPC3LQ5T215 181 aa8.18□□□□□ -1.1
SRGAP3-213ENST00000618999 UTP14CQ5TAP6 766 aaKnown RBP8.18□□□□□ -1.1
SRGAP3-213ENST00000618999 ZNF34Q8IZ26 560 aa8.18□□□□□ -1.1
SRGAP3-213ENST00000618999 SRP68Q9UHB9 627 aaKnown RBP8.18□□□□□ -1.1
SRGAP3-213ENST00000618999 PDE8AO60658 829 aa8.18□□□□□ -1.1
SRGAP3-213ENST00000618999 RPS6KA4O75676 772 aa8.18□□□□□ -1.1
SRGAP3-213ENST00000618999 PTGS1P23219 599 aa8.18□□□□□ -1.1
SRGAP3-213ENST00000618999 ITGA6P23229 1130 aa8.18□□□□□ -1.1
SRGAP3-213ENST00000618999 TIMM10P62072 90 aa8.18□□□□□ -1.1
SRGAP3-213ENST00000618999 SETDB2Q96T68 719 aa8.18□□□□□ -1.1
SRGAP3-213ENST00000618999 PUS3Q9BZE2 481 aaKnown RBP8.18□□□□□ -1.1
SRGAP3-213ENST00000618999 GREM2Q9H772 168 aa8.18□□□□□ -1.1
SRGAP3-213ENST00000618999 KIF20AO95235 890 aa8.18□□□□□ -1.1
SRGAP3-213ENST00000618999 BLOC1S2Q6QNY1 142 aa8.18□□□□□ -1.1
SRGAP3-213ENST00000618999 CCDC186Q7Z3E2 898 aa8.18□□□□□ -1.1
SRGAP3-213ENST00000618999 DDX19AQ9NUU7 478 aaKnown RBP8.18□□□□□ -1.1
SRGAP3-213ENST00000618999 AK9Q5TCS8 1911 aa8.18□□□□□ -1.1
SRGAP3-213ENST00000618999 UBN2Q6ZU65 1347 aa8.17□□□□□ -1.1
SRGAP3-213ENST00000618999 CTSWP56202 376 aa8.17□□□□□ -1.1
SRGAP3-213ENST00000618999 TYRO3Q06418 890 aa8.17□□□□□ -1.1
SRGAP3-213ENST00000618999 TNNI3KQ59H18 835 aa8.17□□□□□ -1.1
SRGAP3-213ENST00000618999 METTL24Q5JXM2 366 aa8.17□□□□□ -1.1
SRGAP3-213ENST00000618999 TLR7Q9NYK1 1049 aaKnown RBP8.17□□□□□ -1.1
SRGAP3-213ENST00000618999 CGNQ9P2M7 1197 aaKnown RBP8.17□□□□□ -1.1
SRGAP3-213ENST00000618999 FPGT-TNNI3KV9GXZ4 949 aa8.17□□□□□ -1.1
SRGAP3-213ENST00000618999 TTC41PQ6P2S7 1318 aa8.17□□□□□ -1.1
SRGAP3-213ENST00000618999 APBA3O96018 575 aa8.17□□□□□ -1.1
SRGAP3-213ENST00000618999 EFCAB3Q8N7B9 438 aa8.17□□□□□ -1.1
SRGAP3-213ENST00000618999 TTLL11Q8NHH1 800 aa8.17□□□□□ -1.1
SRGAP3-213ENST00000618999 DNAJC2Q99543 621 aaKnown RBP8.17□□□□□ -1.1
SRGAP3-213ENST00000618999 MPHOSPH8Q99549 860 aa8.17□□□□□ -1.1
SRGAP3-213ENST00000618999 CLIP2Q9UDT6 1046 aa8.17□□□□□ -1.1
SRGAP3-213ENST00000618999 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.17□□□□□ -1.1
SRGAP3-213ENST00000618999 CPA1P15085 419 aa8.17□□□□□ -1.1
SRGAP3-213ENST00000618999 RC3H1Q5TC82 1133 aaKnown RBP8.17□□□□□ -1.1
SRGAP3-213ENST00000618999 VPS53Q5VIR6 699 aa8.17□□□□□ -1.1
SRGAP3-213ENST00000618999 NBPF5PQ86XG9 351 aaPredicted RBP8.17□□□□□ -1.1
SRGAP3-213ENST00000618999 CCDC24Q8N4L8 307 aa8.17□□□□□ -1.1
SRGAP3-213ENST00000618999 KIAA1524Q8TCG1 905 aa8.17□□□□□ -1.1
SRGAP3-213ENST00000618999 FEZ1Q99689 392 aa8.17□□□□□ -1.1
SRGAP3-213ENST00000618999 DBNDD2Q9BQY9 259 aa8.17□□□□□ -1.1
SRGAP3-213ENST00000618999 SPTLC3Q9NUV7 552 aa8.17□□□□□ -1.1
SRGAP3-213ENST00000618999 PAXBP1Q9Y5B6 917 aa8.17□□□□□ -1.1
SRGAP3-213ENST00000618999 GLI3P10071 1580 aa8.17□□□□□ -1.1
SRGAP3-213ENST00000618999 CNTNAP4Q9C0A0 1308 aa8.16□□□□□ -1.1
SRGAP3-213ENST00000618999 FECHP22830 423 aa8.16□□□□□ -1.1
SRGAP3-213ENST00000618999 CLEC4GQ6UXB4 293 aa8.16□□□□□ -1.1
SRGAP3-213ENST00000618999 CCDC73Q6ZRK6 1079 aa8.16□□□□□ -1.1
SRGAP3-213ENST00000618999 NECAB1Q8N987 351 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms