RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 ARMC9Q7Z3E5 817 aa8.39□□□□□ -1.07
PDE6A-205ENST00000617647 TRIM74Q86UV6 250 aa8.39□□□□□ -1.07
PDE6A-205ENST00000617647 TRIM73Q86UV7 250 aa8.39□□□□□ -1.07
PDE6A-205ENST00000617647 FAM114A1Q8IWE2 563 aa8.39□□□□□ -1.07
PDE6A-205ENST00000617647 ZNF428Q96B54 188 aa8.39□□□□□ -1.07
PDE6A-205ENST00000617647 TPD52L2O43399 206 aaKnown RBP8.39□□□□□ -1.07
PDE6A-205ENST00000617647 RAB11FIP3O75154 756 aa8.39□□□□□ -1.07
PDE6A-205ENST00000617647 PCK1P35558 622 aa8.39□□□□□ -1.07
PDE6A-205ENST00000617647 GNAI1P63096 354 aa8.39□□□□□ -1.07
PDE6A-205ENST00000617647 LAMB3Q13751 1172 aa8.39□□□□□ -1.07
PDE6A-205ENST00000617647 PPP1R7Q15435 360 aa8.39□□□□□ -1.07
PDE6A-205ENST00000617647 BLOC1S2Q6QNY1 142 aa8.39□□□□□ -1.07
PDE6A-205ENST00000617647 FAM135AQ9P2D6 1515 aa8.39□□□□□ -1.07
PDE6A-205ENST00000617647 ATP10BO94823 1461 aa8.39□□□□□ -1.07
PDE6A-205ENST00000617647 E7EVH7 732 aa8.39□□□□□ -1.07
PDE6A-205ENST00000617647 CDC37L1Q7L3B6 337 aa8.39□□□□□ -1.07
PDE6A-205ENST00000617647 MAATS1Q7Z4T9 603 aa8.39□□□□□ -1.07
PDE6A-205ENST00000617647 PARP9Q8IXQ6 854 aa8.39□□□□□ -1.07
PDE6A-205ENST00000617647 CCDC26Q8TAB7 109 aa8.39□□□□□ -1.07
PDE6A-205ENST00000617647 KAT2BQ92831 832 aa8.39□□□□□ -1.07
PDE6A-205ENST00000617647 GPATCH3Q96I76 525 aa8.39□□□□□ -1.07
PDE6A-205ENST00000617647 SPAG5Q96R06 1193 aa8.39□□□□□ -1.07
PDE6A-205ENST00000617647 VIRMAQ69YN4 1812 aaKnown RBP8.39□□□□□ -1.07
PDE6A-205ENST00000617647 ABCC10Q5T3U5 1492 aa8.39□□□□□ -1.07
PDE6A-205ENST00000617647 PIK3C2GO75747 1445 aa8.39□□□□□ -1.07
PDE6A-205ENST00000617647 CLTAP09496 248 aa8.38□□□□□ -1.07
PDE6A-205ENST00000617647 VPS53Q5VIR6 699 aa8.38□□□□□ -1.07
PDE6A-205ENST00000617647 ACRBPQ8NEB7 543 aa8.38□□□□□ -1.07
PDE6A-205ENST00000617647 SEC62Q99442 399 aaKnown RBP8.38□□□□□ -1.07
PDE6A-205ENST00000617647 FUCA2Q9BTY2 467 aa8.38□□□□□ -1.07
PDE6A-205ENST00000617647 UHRF1BP1Q6BDS2 1440 aa8.38□□□□□ -1.07
PDE6A-205ENST00000617647 ARHGEF5Q12774 1597 aa8.38□□□□□ -1.07
PDE6A-205ENST00000617647 ABCD1P33897 745 aa8.38□□□□□ -1.07
PDE6A-205ENST00000617647 GUCY1B3Q02153 619 aa8.38□□□□□ -1.07
PDE6A-205ENST00000617647 SF3A3Q12874 501 aaKnown RBP eCLIP8.38□□□□□ -1.07
PDE6A-205ENST00000617647 ANKRD1Q15327 319 aa8.38□□□□□ -1.07
PDE6A-205ENST00000617647 ZRSR2Q15696 482 aaKnown RBP8.38□□□□□ -1.07
PDE6A-205ENST00000617647 PTPN21Q16825 1174 aa8.38□□□□□ -1.07
PDE6A-205ENST00000617647 FILIP1LQ4L180 1135 aa8.38□□□□□ -1.07
PDE6A-205ENST00000617647 HSP90AB2PQ58FF8 381 aa8.38□□□□□ -1.07
PDE6A-205ENST00000617647 TCEANC2Q96MN5 208 aa8.38□□□□□ -1.07
PDE6A-205ENST00000617647 LRRD1A4D1F6 860 aa8.38□□□□□ -1.07
PDE6A-205ENST00000617647 POLE2P56282 527 aa8.38□□□□□ -1.07
PDE6A-205ENST00000617647 SAFB2Q14151 953 aaKnown RBP eCLIP8.38□□□□□ -1.07
PDE6A-205ENST00000617647 SARM1Q6SZW1 724 aa8.38□□□□□ -1.07
PDE6A-205ENST00000617647 SND1Q7KZF4 910 aaKnown RBP eCLIP8.38□□□□□ -1.07
PDE6A-205ENST00000617647 HINFPQ9BQA5 517 aa8.38□□□□□ -1.07
PDE6A-205ENST00000617647 KAT14Q9H8E8 782 aa8.38□□□□□ -1.07
PDE6A-205ENST00000617647 TMEM165Q9HC07 324 aa8.38□□□□□ -1.07
PDE6A-205ENST00000617647 LAMC1P11047 1609 aa8.38□□□□□ -1.07
PDE6A-205ENST00000617647 ABCC11Q96J66 1382 aa8.38□□□□□ -1.07
PDE6A-205ENST00000617647 SGSM2O43147 1006 aa8.38□□□□□ -1.07
PDE6A-205ENST00000617647 HPDP32754 393 aaPredicted RBP8.38□□□□□ -1.07
PDE6A-205ENST00000617647 PRPHP41219 470 aa8.38□□□□□ -1.07
PDE6A-205ENST00000617647 KCNB1Q14721 858 aa8.38□□□□□ -1.07
PDE6A-205ENST00000617647 SEPT14Q6ZU15 432 aa8.38□□□□□ -1.07
PDE6A-205ENST00000617647 CPLX4Q7Z7G2 160 aa8.38□□□□□ -1.07
PDE6A-205ENST00000617647 THUMPD2Q9BTF0 503 aaKnown RBP8.38□□□□□ -1.07
PDE6A-205ENST00000617647 PPP1R12CQ9BZL4 782 aa8.38□□□□□ -1.07
PDE6A-205ENST00000617647 PPANQ9NQ55 473 aaKnown RBP8.38□□□□□ -1.07
PDE6A-205ENST00000617647 SWAP70Q9UH65 585 aa8.38□□□□□ -1.07
PDE6A-205ENST00000617647 GOLGA6L10A0A0M3HER8 536 aa8.37□□□□□ -1.07
PDE6A-205ENST00000617647 A6NNZ2 444 aa8.37□□□□□ -1.07
PDE6A-205ENST00000617647 CDKL5O76039 1030 aa8.37□□□□□ -1.07
PDE6A-205ENST00000617647 PSME1Q06323 249 aa8.37□□□□□ -1.07
PDE6A-205ENST00000617647 PDCLQ13371 301 aa8.37□□□□□ -1.07
PDE6A-205ENST00000617647 TUBB8Q3ZCM7 444 aa8.37□□□□□ -1.07
PDE6A-205ENST00000617647 MYLK4Q86YV6 388 aaPredicted RBP8.37□□□□□ -1.07
PDE6A-205ENST00000617647 LMNTD2Q8IXW0 634 aa8.37□□□□□ -1.07
PDE6A-205ENST00000617647 B4GALNT2Q8NHY0 566 aa8.37□□□□□ -1.07
PDE6A-205ENST00000617647 MCM8Q9UJA3 840 aa8.37□□□□□ -1.07
PDE6A-205ENST00000617647 RGS12O14924 1447 aa8.37□□□□□ -1.07
PDE6A-205ENST00000617647 MEFVO15553 781 aaPredicted RBP8.37□□□□□ -1.07
PDE6A-205ENST00000617647 PFDN1O60925 122 aa8.37□□□□□ -1.07
PDE6A-205ENST00000617647 CHMLP26374 656 aa8.37□□□□□ -1.07
PDE6A-205ENST00000617647 TPP2P29144 1249 aaPredicted RBP8.37□□□□□ -1.07
PDE6A-205ENST00000617647 MTX1Q13505 466 aa8.37□□□□□ -1.07
PDE6A-205ENST00000617647 PREPLQ4J6C6 727 aaPredicted RBP8.37□□□□□ -1.07
PDE6A-205ENST00000617647 ARL10Q8N8L6 244 aa8.37□□□□□ -1.07
PDE6A-205ENST00000617647 WDR66Q8TBY9 1149 aa8.37□□□□□ -1.07
PDE6A-205ENST00000617647 TCP11Q8WWU5 503 aa8.37□□□□□ -1.07
PDE6A-205ENST00000617647 RIN2Q8WYP3 895 aaPredicted RBP8.37□□□□□ -1.07
PDE6A-205ENST00000617647 NAPGQ99747 312 aaPredicted RBP8.37□□□□□ -1.07
PDE6A-205ENST00000617647 FAM167BQ9BTA0 163 aa8.37□□□□□ -1.07
PDE6A-205ENST00000617647 ARHGAP5Q13017 1502 aa8.37□□□□□ -1.07
PDE6A-205ENST00000617647 DIAPH1O60610 1272 aaKnown RBP8.37□□□□□ -1.07
PDE6A-205ENST00000617647 ZMYND10O75800 440 aa8.37□□□□□ -1.07
PDE6A-205ENST00000617647 KCTD16Q68DU8 428 aa8.37□□□□□ -1.07
PDE6A-205ENST00000617647 CCDC47Q96A33 483 aaKnown RBP8.37□□□□□ -1.07
PDE6A-205ENST00000617647 PCMTD1Q96MG8 357 aaPredicted RBP8.37□□□□□ -1.07
PDE6A-205ENST00000617647 BATF3Q9NR55 127 aa8.37□□□□□ -1.07
PDE6A-205ENST00000617647 ZNHIT6Q9NWK9 470 aaKnown RBP8.37□□□□□ -1.07
PDE6A-205ENST00000617647 CDC23Q9UJX2 597 aa8.37□□□□□ -1.07
PDE6A-205ENST00000617647 PARP3Q9Y6F1 533 aa8.37□□□□□ -1.07
PDE6A-205ENST00000617647 PPIP5K1Q6PFW1 1433 aa8.36□□□□□ -1.07
PDE6A-205ENST00000617647 RPS6KA5O75582 802 aa8.36□□□□□ -1.07
PDE6A-205ENST00000617647 IRAK1P51617 712 aa8.36□□□□□ -1.07
PDE6A-205ENST00000617647 IFFO1Q0D2I5 559 aa8.36□□□□□ -1.07
PDE6A-205ENST00000617647 WDR24Q96S15 920 aa8.36□□□□□ -1.07
PDE6A-205ENST00000617647 MIS18AQ9NYP9 233 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms