RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 A0A1B0GUL6 1792 aa20.61■□□□□ 0.89
PCDHGC3-205ENST00000617641 ZNF532Q9HCE3 1301 aa20.61■□□□□ 0.89
PCDHGC3-205ENST00000617641 BRWD3Q6RI45 1802 aa20.6■□□□□ 0.89
PCDHGC3-205ENST00000617641 WTIPA6NIX2 430 aaPredicted RBP20.6■□□□□ 0.89
PCDHGC3-205ENST00000617641 STK3Q13188 491 aa20.6■□□□□ 0.89
PCDHGC3-205ENST00000617641 UBE3CQ15386 1083 aa20.6■□□□□ 0.89
PCDHGC3-205ENST00000617641 TPTE2Q6XPS3 522 aa20.6■□□□□ 0.89
PCDHGC3-205ENST00000617641 NLRP3Q96P20 1036 aa20.6■□□□□ 0.89
PCDHGC3-205ENST00000617641 STX6O43752 255 aa20.6■□□□□ 0.89
PCDHGC3-205ENST00000617641 PRPF40AO75400 957 aaKnown RBP20.6■□□□□ 0.89
PCDHGC3-205ENST00000617641 FGAP02671 866 aa20.6■□□□□ 0.89
PCDHGC3-205ENST00000617641 HMGB1P09429 215 aaKnown RBP20.6■□□□□ 0.89
PCDHGC3-205ENST00000617641 HAND2P61296 217 aa20.6■□□□□ 0.89
PCDHGC3-205ENST00000617641 FOXD4L6Q3SYB3 417 aaPredicted RBP20.6■□□□□ 0.89
PCDHGC3-205ENST00000617641 FOXD4L3Q6VB84 417 aaPredicted RBP20.6■□□□□ 0.89
PCDHGC3-205ENST00000617641 CTNNA3Q9UI47 895 aa20.6■□□□□ 0.89
PCDHGC3-205ENST00000617641 DDX49Q9Y6V7 483 aaKnown RBP20.6■□□□□ 0.89
PCDHGC3-205ENST00000617641 TCRBV5S4A2TA0A5A2 114 aa20.59■□□□□ 0.89
PCDHGC3-205ENST00000617641 DHX32Q7L7V1 743 aaKnown RBP20.59■□□□□ 0.89
PCDHGC3-205ENST00000617641 MINPP1Q9UNW1 487 aa20.59■□□□□ 0.89
PCDHGC3-205ENST00000617641 KRT27Q7Z3Y8 459 aa20.59■□□□□ 0.89
PCDHGC3-205ENST00000617641 DOCK2Q92608 1830 aa20.59■□□□□ 0.89
PCDHGC3-205ENST00000617641 ZSCAN22P10073 491 aaPredicted RBP20.58■□□□□ 0.89
PCDHGC3-205ENST00000617641 BRF1Q92994 677 aa20.58■□□□□ 0.89
PCDHGC3-205ENST00000617641 FGD1P98174 961 aa20.58■□□□□ 0.88
PCDHGC3-205ENST00000617641 EXOSC10Q01780 885 aaKnown RBP20.58■□□□□ 0.88
PCDHGC3-205ENST00000617641 IMMTQ16891 758 aaKnown RBP20.58■□□□□ 0.88
PCDHGC3-205ENST00000617641 KLHL40Q2TBA0 621 aa20.58■□□□□ 0.88
PCDHGC3-205ENST00000617641 IQSEC3Q9UPP2 1182 aaPredicted RBP20.58■□□□□ 0.88
PCDHGC3-205ENST00000617641 TRIM37O94972 964 aa20.57■□□□□ 0.88
PCDHGC3-205ENST00000617641 MAGEB6Q8N7X4 407 aa20.57■□□□□ 0.88
PCDHGC3-205ENST00000617641 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.56■□□□□ 0.88
PCDHGC3-205ENST00000617641 NPHP1O15259 732 aa20.56■□□□□ 0.88
PCDHGC3-205ENST00000617641 GYG1P46976 350 aa20.56■□□□□ 0.88
PCDHGC3-205ENST00000617641 RPS8P62241 208 aaKnown RBP20.56■□□□□ 0.88
PCDHGC3-205ENST00000617641 MAP3K12Q12852 859 aa20.56■□□□□ 0.88
PCDHGC3-205ENST00000617641 NFIXQ14938 502 aa20.56■□□□□ 0.88
PCDHGC3-205ENST00000617641 UBE4AQ14139 1066 aa20.56■□□□□ 0.88
PCDHGC3-205ENST00000617641 TNRC6CQ9HCJ0 1690 aaKnown RBP20.56■□□□□ 0.88
PCDHGC3-205ENST00000617641 CHST3Q7LGC8 479 aa20.55■□□□□ 0.88
PCDHGC3-205ENST00000617641 GTF3C6Q969F1 213 aa20.55■□□□□ 0.88
PCDHGC3-205ENST00000617641 UBR3Q6ZT12 1888 aa20.55■□□□□ 0.88
PCDHGC3-205ENST00000617641 CARMIL3Q8ND23 1372 aa20.55■□□□□ 0.88
PCDHGC3-205ENST00000617641 ZNF804BA4D1E1 1349 aa20.55■□□□□ 0.88
PCDHGC3-205ENST00000617641 AIDAQ96BJ3 306 aa20.54■□□□□ 0.88
PCDHGC3-205ENST00000617641 MTMR6Q9Y217 621 aa20.54■□□□□ 0.88
PCDHGC3-205ENST00000617641 F13A1P00488 732 aa20.54■□□□□ 0.88
PCDHGC3-205ENST00000617641 ADRA2BP18089 450 aa20.54■□□□□ 0.88
PCDHGC3-205ENST00000617641 NCLP19338 710 aaKnown RBP20.54■□□□□ 0.88
PCDHGC3-205ENST00000617641 APOBRQ0VD83 1088 aa20.54■□□□□ 0.88
PCDHGC3-205ENST00000617641 STRBPQ96SI9 672 aaKnown RBP20.54■□□□□ 0.88
PCDHGC3-205ENST00000617641 ZNF213O14771 459 aa20.53■□□□□ 0.88
PCDHGC3-205ENST00000617641 APPP05067 770 aa20.53■□□□□ 0.88
PCDHGC3-205ENST00000617641 TM4SF1P30408 202 aa20.53■□□□□ 0.88
PCDHGC3-205ENST00000617641 GPT2Q8TD30 523 aa20.53■□□□□ 0.88
PCDHGC3-205ENST00000617641 AGXT2Q9BYV1 514 aa20.53■□□□□ 0.88
PCDHGC3-205ENST00000617641 VPS37CA5D8V6 355 aaPredicted RBP20.53■□□□□ 0.88
PCDHGC3-205ENST00000617641 COL1A1P02452 1464 aaPredicted RBP20.52■□□□□ 0.88
PCDHGC3-205ENST00000617641 FSD2A1L4K1 749 aa20.52■□□□□ 0.88
PCDHGC3-205ENST00000617641 GOLGA6L3A6NEY3 463 aa20.52■□□□□ 0.88
PCDHGC3-205ENST00000617641 MBD4O95243 580 aa20.52■□□□□ 0.88
PCDHGC3-205ENST00000617641 SLC27A3Q5K4L6 730 aa20.52■□□□□ 0.88
PCDHGC3-205ENST00000617641 LARP1BQ659C4 914 aaKnown RBP20.52■□□□□ 0.88
PCDHGC3-205ENST00000617641 GDPD2Q9HCC8 539 aa20.52■□□□□ 0.88
PCDHGC3-205ENST00000617641 JAK2O60674 1132 aa20.52■□□□□ 0.87
PCDHGC3-205ENST00000617641 KLRK1P26718 216 aa20.52■□□□□ 0.87
PCDHGC3-205ENST00000617641 CNBD1Q8NA66 436 aa20.52■□□□□ 0.87
PCDHGC3-205ENST00000617641 NBPF3Q9H094 633 aa20.52■□□□□ 0.87
PCDHGC3-205ENST00000617641 GNL3LQ9NVN8 582 aaKnown RBP20.52■□□□□ 0.87
PCDHGC3-205ENST00000617641 LRP2BPQ9P2M1 347 aa20.52■□□□□ 0.87
PCDHGC3-205ENST00000617641 SCRN1Q12765 414 aa20.51■□□□□ 0.87
PCDHGC3-205ENST00000617641 CAVIN4Q5BKX8 364 aa20.51■□□□□ 0.87
PCDHGC3-205ENST00000617641 FAM84BQ96KN1 310 aaPredicted RBP20.51■□□□□ 0.87
PCDHGC3-205ENST00000617641 ARMT1Q9H993 441 aa20.51■□□□□ 0.87
PCDHGC3-205ENST00000617641 PFKFB2O60825 505 aa20.5■□□□□ 0.87
PCDHGC3-205ENST00000617641 CAVIN1Q6NZI2 390 aaKnown RBP20.5■□□□□ 0.87
PCDHGC3-205ENST00000617641 VPS37DQ86XT2 251 aa20.5■□□□□ 0.87
PCDHGC3-205ENST00000617641 MB21D2Q8IYB1 491 aaPredicted RBP20.5■□□□□ 0.87
PCDHGC3-205ENST00000617641 GPHNQ9NQX3 736 aaPredicted RBP20.5■□□□□ 0.87
PCDHGC3-205ENST00000617641 TCHHQ07283 1943 aa20.5■□□□□ 0.87
PCDHGC3-205ENST00000617641 GYS1P13807 737 aa20.5■□□□□ 0.87
PCDHGC3-205ENST00000617641 TBC1D10CQ8IV04 446 aa20.49■□□□□ 0.87
PCDHGC3-205ENST00000617641 ABCF2Q9UG63 623 aa20.49■□□□□ 0.87
PCDHGC3-205ENST00000617641 NAP1L2Q9ULW6 460 aaPredicted RBP20.49■□□□□ 0.87
PCDHGC3-205ENST00000617641 NSFL1CQ9UNZ2 370 aaKnown RBP20.49■□□□□ 0.87
PCDHGC3-205ENST00000617641 NCOA7Q8NI08 942 aa20.49■□□□□ 0.87
PCDHGC3-205ENST00000617641 EPB41L4AQ9HCS5 686 aaPredicted RBP20.49■□□□□ 0.87
PCDHGC3-205ENST00000617641 CNPY2Q9Y2B0 182 aa20.49■□□□□ 0.87
PCDHGC3-205ENST00000617641 PRC1O43663 620 aa20.48■□□□□ 0.87
PCDHGC3-205ENST00000617641 PDCP20941 246 aa20.48■□□□□ 0.87
PCDHGC3-205ENST00000617641 CDC37L1Q7L3B6 337 aa20.48■□□□□ 0.87
PCDHGC3-205ENST00000617641 RALYLQ86SE5 291 aaKnown RBP20.48■□□□□ 0.87
PCDHGC3-205ENST00000617641 SLC51AQ86UW1 340 aa20.48■□□□□ 0.87
PCDHGC3-205ENST00000617641 ANKRD2Q9GZV1 360 aa20.48■□□□□ 0.87
PCDHGC3-205ENST00000617641 DENND2AQ9ULE3 1009 aa20.48■□□□□ 0.87
PCDHGC3-205ENST00000617641 PATL2C9JE40 543 aaKnown RBP20.48■□□□□ 0.87
PCDHGC3-205ENST00000617641 MCM5P33992 734 aa20.48■□□□□ 0.87
PCDHGC3-205ENST00000617641 ANTXR2P58335 489 aa20.48■□□□□ 0.87
PCDHGC3-205ENST00000617641 L1TD1Q5T7N2 865 aaKnown RBP20.48■□□□□ 0.87
PCDHGC3-205ENST00000617641 PRR5LQ6MZQ0 368 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms