RNA–Protein interactions for RNA: ENST00000617462.4

CPEB1-213, Transcript of cytoplasmic polyadenylation element binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene CPEB1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB1-213ENST00000617462 NFIXQ14938 502 aa16.45■□□□□ 0.22
CPEB1-213ENST00000617462 CDC5LQ99459 802 aaKnown RBP16.45■□□□□ 0.22
CPEB1-213ENST00000617462 TM4SF1P30408 202 aa16.44■□□□□ 0.22
CPEB1-213ENST00000617462 RFC4P35249 363 aa16.44■□□□□ 0.22
CPEB1-213ENST00000617462 NBPF3Q9H094 633 aa16.44■□□□□ 0.22
CPEB1-213ENST00000617462 ALDH8A1Q9H2A2 487 aaPredicted RBP16.44■□□□□ 0.22
CPEB1-213ENST00000617462 GPHNQ9NQX3 736 aaPredicted RBP16.44■□□□□ 0.22
CPEB1-213ENST00000617462 NSFL1CQ9UNZ2 370 aaKnown RBP16.44■□□□□ 0.22
CPEB1-213ENST00000617462 SMC3Q9UQE7 1217 aa16.44■□□□□ 0.22
CPEB1-213ENST00000617462 GOLGB1Q14789 3259 aaKnown RBP16.44■□□□□ 0.22
CPEB1-213ENST00000617462 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.44■□□□□ 0.22
CPEB1-213ENST00000617462 UQCRFS1P1P0C7P4 283 aa16.44■□□□□ 0.22
CPEB1-213ENST00000617462 TRAPPC3LQ5T215 181 aa16.44■□□□□ 0.22
CPEB1-213ENST00000617462 KRT27Q7Z3Y8 459 aa16.44■□□□□ 0.22
CPEB1-213ENST00000617462 TICAM2Q86XR7 235 aa16.44■□□□□ 0.22
CPEB1-213ENST00000617462 PROM2Q8N271 834 aa16.44■□□□□ 0.22
CPEB1-213ENST00000617462 ZSCAN31Q96LW9 406 aaPredicted RBP16.44■□□□□ 0.22
CPEB1-213ENST00000617462 GDPD2Q9HCC8 539 aa16.44■□□□□ 0.22
CPEB1-213ENST00000617462 SH2B1Q9NRF2 756 aaPredicted RBP16.44■□□□□ 0.22
CPEB1-213ENST00000617462 BSDC1Q9NW68 430 aaPredicted RBP16.44■□□□□ 0.22
CPEB1-213ENST00000617462 PRPF40AO75400 957 aaKnown RBP16.43■□□□□ 0.22
CPEB1-213ENST00000617462 KRT32Q14532 448 aa16.43■□□□□ 0.22
CPEB1-213ENST00000617462 BRF1Q92994 677 aa16.43■□□□□ 0.22
CPEB1-213ENST00000617462 EXOSC10Q01780 885 aaKnown RBP16.42■□□□□ 0.22
CPEB1-213ENST00000617462 MAGEB6Q8N7X4 407 aa16.42■□□□□ 0.22
CPEB1-213ENST00000617462 GPT2Q8TD30 523 aa16.42■□□□□ 0.22
CPEB1-213ENST00000617462 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.42■□□□□ 0.22
CPEB1-213ENST00000617462 JAK2O60674 1132 aa16.42■□□□□ 0.22
CPEB1-213ENST00000617462 IL27Q8NEV9 243 aa16.42■□□□□ 0.22
CPEB1-213ENST00000617462 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.42■□□□□ 0.223e-7■■■■■ 42.3
CPEB1-213ENST00000617462 RGL2O15211 777 aa16.41■□□□□ 0.22
CPEB1-213ENST00000617462 STX6O43752 255 aa16.41■□□□□ 0.22
CPEB1-213ENST00000617462 HSP90B1P14625 803 aaKnown RBP16.41■□□□□ 0.22
CPEB1-213ENST00000617462 APOBRQ0VD83 1088 aa16.41■□□□□ 0.22
CPEB1-213ENST00000617462 TTF1Q15361 905 aaPredicted RBP16.41■□□□□ 0.22
CPEB1-213ENST00000617462 UBE3CQ15386 1083 aa16.41■□□□□ 0.22
CPEB1-213ENST00000617462 ADGRA1Q86SQ6 560 aa16.41■□□□□ 0.22
CPEB1-213ENST00000617462 NLRP3Q96P20 1036 aa16.41■□□□□ 0.22
CPEB1-213ENST00000617462 NYXQ9GZU5 481 aa16.41■□□□□ 0.22
CPEB1-213ENST00000617462 ZNF804BA4D1E1 1349 aa16.41■□□□□ 0.22
CPEB1-213ENST00000617462 TPTE2Q6XPS3 522 aa16.41■□□□□ 0.22
CPEB1-213ENST00000617462 DHX32Q7L7V1 743 aaKnown RBP16.41■□□□□ 0.22
CPEB1-213ENST00000617462 MTMR6Q9Y217 621 aa16.41■□□□□ 0.22
CPEB1-213ENST00000617462 PPFIA3O75145 1194 aa16.4■□□□□ 0.22
CPEB1-213ENST00000617462 RPS8P62241 208 aaKnown RBP16.4■□□□□ 0.22
CPEB1-213ENST00000617462 SCRN1Q12765 414 aa16.4■□□□□ 0.22
CPEB1-213ENST00000617462 GAS2L3Q86XJ1 694 aa16.4■□□□□ 0.22
CPEB1-213ENST00000617462 EPB41L4AQ9HCS5 686 aaPredicted RBP16.4■□□□□ 0.22
CPEB1-213ENST00000617462 INCENPQ9NQS7 918 aa16.4■□□□□ 0.22
CPEB1-213ENST00000617462 TACC3Q9Y6A5 838 aa16.4■□□□□ 0.22
CPEB1-213ENST00000617462 DDX49Q9Y6V7 483 aaKnown RBP16.4■□□□□ 0.22
CPEB1-213ENST00000617462 CACNA1SQ13698 1873 aa16.4■□□□□ 0.22
CPEB1-213ENST00000617462 PRKAB2O43741 272 aa16.39■□□□□ 0.21
CPEB1-213ENST00000617462 ZSCAN22P10073 491 aaPredicted RBP16.39■□□□□ 0.21
CPEB1-213ENST00000617462 GYS1P13807 737 aa16.39■□□□□ 0.21
CPEB1-213ENST00000617462 TXNRD3Q86VQ6 643 aa16.39■□□□□ 0.21
CPEB1-213ENST00000617462 TBC1D10CQ8IV04 446 aa16.39■□□□□ 0.21
CPEB1-213ENST00000617462 GTF3C6Q969F1 213 aa16.39■□□□□ 0.21
CPEB1-213ENST00000617462 FAM84BQ96KN1 310 aaPredicted RBP16.39■□□□□ 0.21
CPEB1-213ENST00000617462 STRBPQ96SI9 672 aaKnown RBP16.39■□□□□ 0.21
CPEB1-213ENST00000617462 ARMT1Q9H993 441 aa16.39■□□□□ 0.21
CPEB1-213ENST00000617462 RBM27Q9P2N5 1060 aaKnown RBP16.39■□□□□ 0.21
CPEB1-213ENST00000617462 MYH13Q9UKX3 1938 aa16.39■□□□□ 0.21
CPEB1-213ENST00000617462 WDR33Q9C0J8 1336 aaKnown RBP16.39■□□□□ 0.21
CPEB1-213ENST00000617462 ANTXR2P58335 489 aa16.39■□□□□ 0.21
CPEB1-213ENST00000617462 ANKRD1Q15327 319 aa16.39■□□□□ 0.21
CPEB1-213ENST00000617462 LRRFIP1Q32MZ4 808 aaKnown RBP16.39■□□□□ 0.21
CPEB1-213ENST00000617462 TFCP2L1Q9NZI6 479 aa16.39■□□□□ 0.21
CPEB1-213ENST00000617462 CARMIL3Q8ND23 1372 aa16.39■□□□□ 0.21
CPEB1-213ENST00000617462 GOLGA6L22H0YM25 854 aa16.38■□□□□ 0.21
CPEB1-213ENST00000617462 MBD4O95243 580 aa16.38■□□□□ 0.21
CPEB1-213ENST00000617462 CDC37L1Q7L3B6 337 aa16.38■□□□□ 0.21
CPEB1-213ENST00000617462 ZNF384Q8TF68 577 aa16.38■□□□□ 0.21
CPEB1-213ENST00000617462 AGXT2Q9BYV1 514 aa16.38■□□□□ 0.21
CPEB1-213ENST00000617462 CHD4Q14839 1912 aa16.38■□□□□ 0.21
CPEB1-213ENST00000617462 FSD2A1L4K1 749 aa16.38■□□□□ 0.21
CPEB1-213ENST00000617462 GADD45BO75293 160 aaPredicted RBP16.38■□□□□ 0.21
CPEB1-213ENST00000617462 F13A1P00488 732 aa16.38■□□□□ 0.21
CPEB1-213ENST00000617462 UBE4AQ14139 1066 aa16.38■□□□□ 0.21
CPEB1-213ENST00000617462 KLHL40Q2TBA0 621 aa16.38■□□□□ 0.21
CPEB1-213ENST00000617462 PRR5LQ6MZQ0 368 aa16.38■□□□□ 0.21
CPEB1-213ENST00000617462 ZSCAN25Q6NSZ9 544 aa16.38■□□□□ 0.21
CPEB1-213ENST00000617462 MB21D2Q8IYB1 491 aaPredicted RBP16.38■□□□□ 0.21
CPEB1-213ENST00000617462 LCORLQ8N3X6 602 aa16.38■□□□□ 0.21
CPEB1-213ENST00000617462 MIGA1Q8NAN2 632 aa16.38■□□□□ 0.21
CPEB1-213ENST00000617462 NCOA5Q9HCD5 579 aaKnown RBP16.38■□□□□ 0.21
CPEB1-213ENST00000617462 CNPY2Q9Y2B0 182 aa16.38■□□□□ 0.21
CPEB1-213ENST00000617462 SMIM22K7EJ46 135 aa16.37■□□□□ 0.21
CPEB1-213ENST00000617462 CTDNEP1O95476 244 aa16.37■□□□□ 0.21
CPEB1-213ENST00000617462 IMMTQ16891 758 aaKnown RBP16.37■□□□□ 0.21
CPEB1-213ENST00000617462 VPS37CA5D8V6 355 aaPredicted RBP16.36■□□□□ 0.21
CPEB1-213ENST00000617462 CCT2P78371 535 aaKnown RBP16.36■□□□□ 0.21
CPEB1-213ENST00000617462 FAM173BQ6P4H8 233 aa16.36■□□□□ 0.21
CPEB1-213ENST00000617462 RAB11FIP4Q86YS3 637 aa16.36■□□□□ 0.21
CPEB1-213ENST00000617462 GPR101Q96P66 508 aaPredicted RBP16.36■□□□□ 0.21
CPEB1-213ENST00000617462 JAG2Q9Y219 1238 aa16.36■□□□□ 0.21
CPEB1-213ENST00000617462 NPHP1O15259 732 aa16.36■□□□□ 0.21
CPEB1-213ENST00000617462 APPP05067 770 aa16.36■□□□□ 0.21
CPEB1-213ENST00000617462 NCLP19338 710 aaKnown RBP16.36■□□□□ 0.21
CPEB1-213ENST00000617462 DDR1Q08345 913 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms