RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 ZNF541Q9H0D2 1346 aa19.08■□□□□ 0.65
PCDHGC3-204ENST00000617222 PSMD14O00487 310 aa19.08■□□□□ 0.64
PCDHGC3-204ENST00000617222 ATP5JP18859 108 aa19.08■□□□□ 0.64
PCDHGC3-204ENST00000617222 MCAMP43121 646 aa19.08■□□□□ 0.64
PCDHGC3-204ENST00000617222 STRIP1Q5VSL9 837 aa19.08■□□□□ 0.64
PCDHGC3-204ENST00000617222 PLEKHM2Q8IWE5 1019 aa19.08■□□□□ 0.64
PCDHGC3-204ENST00000617222 SPATA5Q8NB90 893 aa19.08■□□□□ 0.64
PCDHGC3-204ENST00000617222 BOLA2Q9H3K6 86 aa19.08■□□□□ 0.64
PCDHGC3-204ENST00000617222 HMG20BQ9P0W2 317 aa19.08■□□□□ 0.64
PCDHGC3-204ENST00000617222 FAM205AQ6ZU69 1335 aa19.07■□□□□ 0.64
PCDHGC3-204ENST00000617222 PDE1AP54750 535 aa19.07■□□□□ 0.64
PCDHGC3-204ENST00000617222 TNIP1Q15025 636 aa19.07■□□□□ 0.64
PCDHGC3-204ENST00000617222 PI16Q6UXB8 463 aa19.07■□□□□ 0.64
PCDHGC3-204ENST00000617222 SKAP1Q86WV1 359 aa19.07■□□□□ 0.64
PCDHGC3-204ENST00000617222 MXD3Q9BW11 206 aa19.07■□□□□ 0.64
PCDHGC3-204ENST00000617222 STAP2Q9UGK3 403 aa19.07■□□□□ 0.64
PCDHGC3-204ENST00000617222 GJA3Q9Y6H8 435 aa19.07■□□□□ 0.64
PCDHGC3-204ENST00000617222 SBF1O95248 1867 aa19.07■□□□□ 0.64
PCDHGC3-204ENST00000617222 TTC41PQ6P2S7 1318 aa19.06■□□□□ 0.64
PCDHGC3-204ENST00000617222 ZBTB22O15209 634 aa19.06■□□□□ 0.64
PCDHGC3-204ENST00000617222 VIL1P09327 827 aaKnown RBP19.06■□□□□ 0.64
PCDHGC3-204ENST00000617222 DACT2Q5SW24 774 aa19.06■□□□□ 0.64
PCDHGC3-204ENST00000617222 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.06■□□□□ 0.64
PCDHGC3-204ENST00000617222 NDUFB9Q9Y6M9 179 aa19.06■□□□□ 0.64
PCDHGC3-204ENST00000617222 CCDC88AQ3V6T2 1871 aa19.05■□□□□ 0.64
PCDHGC3-204ENST00000617222 ERC2O15083 957 aa19.05■□□□□ 0.64
PCDHGC3-204ENST00000617222 ZAP70P43403 619 aa19.05■□□□□ 0.64
PCDHGC3-204ENST00000617222 DPY19L2Q6NUT2 758 aa19.05■□□□□ 0.64
PCDHGC3-204ENST00000617222 WDR66Q8TBY9 1149 aa19.05■□□□□ 0.64
PCDHGC3-204ENST00000617222 DNAJC2Q99543 621 aaKnown RBP19.05■□□□□ 0.64
PCDHGC3-204ENST00000617222 ZC3H4Q9UPT8 1303 aaKnown RBP19.04■□□□□ 0.64
PCDHGC3-204ENST00000617222 GLRX3O76003 335 aaKnown RBP19.04■□□□□ 0.64
PCDHGC3-204ENST00000617222 DDNO94850 711 aaPredicted RBP19.04■□□□□ 0.64
PCDHGC3-204ENST00000617222 MFSD14BQ5SR56 506 aa19.04■□□□□ 0.64
PCDHGC3-204ENST00000617222 RSBN1LQ6PCB5 846 aaPredicted RBP19.04■□□□□ 0.64
PCDHGC3-204ENST00000617222 PI4K2BQ8TCG2 481 aa19.04■□□□□ 0.64
PCDHGC3-204ENST00000617222 ARAP2Q8WZ64 1704 aa19.04■□□□□ 0.64
PCDHGC3-204ENST00000617222 ZBTB12Q9Y330 459 aaPredicted RBP19.04■□□□□ 0.64
PCDHGC3-204ENST00000617222 COL1A1P02452 1464 aaPredicted RBP19.03■□□□□ 0.64
PCDHGC3-204ENST00000617222 PDS5AQ29RF7 1337 aaKnown RBP19.03■□□□□ 0.64
PCDHGC3-204ENST00000617222 TBC1D9Q6ZT07 1266 aa19.03■□□□□ 0.64
PCDHGC3-204ENST00000617222 GPC2Q8N158 579 aa19.03■□□□□ 0.64
PCDHGC3-204ENST00000617222 CERS5Q8N5B7 392 aa19.03■□□□□ 0.64
PCDHGC3-204ENST00000617222 TBC1D22AQ8WUA7 517 aa19.03■□□□□ 0.64
PCDHGC3-204ENST00000617222 HAUS7Q99871 368 aa19.03■□□□□ 0.64
PCDHGC3-204ENST00000617222 GLTPD2A6NH11 291 aa19.02■□□□□ 0.64
PCDHGC3-204ENST00000617222 CYP2E1P05181 493 aaPredicted RBP19.02■□□□□ 0.64
PCDHGC3-204ENST00000617222 FKBP1AP62942 108 aaKnown RBP19.02■□□□□ 0.64
PCDHGC3-204ENST00000617222 OSBPL3Q9H4L5 887 aa19.02■□□□□ 0.64
PCDHGC3-204ENST00000617222 ABCF2Q9UG63 623 aa19.02■□□□□ 0.64
PCDHGC3-204ENST00000617222 CHD4Q14839 1912 aa19.02■□□□□ 0.63
PCDHGC3-204ENST00000617222 GOLIM4O00461 696 aa19.01■□□□□ 0.63
PCDHGC3-204ENST00000617222 MAP4K4O95819 1239 aaPredicted RBP19.01■□□□□ 0.63
PCDHGC3-204ENST00000617222 RGS3P49796 1198 aa19.01■□□□□ 0.63
PCDHGC3-204ENST00000617222 GMPSP49915 693 aaPredicted RBP19.01■□□□□ 0.63
PCDHGC3-204ENST00000617222 GRIK5Q16478 980 aa19.01■□□□□ 0.63
PCDHGC3-204ENST00000617222 ZGPATQ8N5A5 531 aaKnown RBP19.01■□□□□ 0.63
PCDHGC3-204ENST00000617222 EDC3Q96F86 508 aaKnown RBP19.01■□□□□ 0.63
PCDHGC3-204ENST00000617222 ANTXR1Q9H6X2 564 aa19.01■□□□□ 0.63
PCDHGC3-204ENST00000617222 PIH1D3Q9NQM4 214 aaKnown RBP19.01■□□□□ 0.63
PCDHGC3-204ENST00000617222 DICER1Q9UPY3 1922 aaKnown RBP19.01■□□□□ 0.63
PCDHGC3-204ENST00000617222 SCN9AQ15858 1988 aa19.01■□□□□ 0.63
PCDHGC3-204ENST00000617222 AOX1Q06278 1338 aa19■□□□□ 0.63
PCDHGC3-204ENST00000617222 SALL1Q9NSC2 1324 aa19■□□□□ 0.63
PCDHGC3-204ENST00000617222 F8W031 263 aaPredicted RBP19■□□□□ 0.63
PCDHGC3-204ENST00000617222 KIAA0825Q8IV33 1275 aa19■□□□□ 0.63
PCDHGC3-204ENST00000617222 AGBL3Q8NEM8 1001 aa19■□□□□ 0.63
PCDHGC3-204ENST00000617222 GMLQ99445 158 aa19■□□□□ 0.63
PCDHGC3-204ENST00000617222 PAG1Q9NWQ8 432 aa19■□□□□ 0.63
PCDHGC3-204ENST00000617222 UTRNP46939 3433 aa19■□□□□ 0.63
PCDHGC3-204ENST00000617222 MYO3BQ8WXR4 1341 aa19■□□□□ 0.63
PCDHGC3-204ENST00000617222 RPS12P25398 132 aaKnown RBP18.99■□□□□ 0.63
PCDHGC3-204ENST00000617222 SPTY2D1Q68D10 685 aaPredicted RBP18.99■□□□□ 0.63
PCDHGC3-204ENST00000617222 ERICH6Q7L0X2 663 aa18.99■□□□□ 0.63
PCDHGC3-204ENST00000617222 DPF2Q92785 391 aa18.99■□□□□ 0.63
PCDHGC3-204ENST00000617222 LRP2BPQ9P2M1 347 aa18.99■□□□□ 0.63
PCDHGC3-204ENST00000617222 LDHBP07195 334 aaKnown RBP18.98■□□□□ 0.63
PCDHGC3-204ENST00000617222 PRDX5P30044 214 aa18.98■□□□□ 0.63
PCDHGC3-204ENST00000617222 TTF1Q15361 905 aaPredicted RBP18.98■□□□□ 0.63
PCDHGC3-204ENST00000617222 RAI14Q9P0K7 980 aa18.98■□□□□ 0.63
PCDHGC3-204ENST00000617222 TTF2Q9UNY4 1162 aaKnown RBP18.98■□□□□ 0.63
PCDHGC3-204ENST00000617222 SUGT1Q9Y2Z0 365 aa18.98■□□□□ 0.63
PCDHGC3-204ENST00000617222 SHTN1A0MZ66 631 aa18.97■□□□□ 0.63
PCDHGC3-204ENST00000617222 USP17L8P0C7I0 530 aa18.97■□□□□ 0.63
PCDHGC3-204ENST00000617222 CNOT7Q9UIV1 285 aaKnown RBP18.97■□□□□ 0.63
PCDHGC3-204ENST00000617222 TRIM6-TRIM34B2RNG4 842 aa18.96■□□□□ 0.63
PCDHGC3-204ENST00000617222 IDH1O75874 414 aaKnown RBP18.96■□□□□ 0.63
PCDHGC3-204ENST00000617222 SCNN1DP51172 638 aa18.96■□□□□ 0.63
PCDHGC3-204ENST00000617222 TTC22Q5TAA0 569 aa18.96■□□□□ 0.63
PCDHGC3-204ENST00000617222 MICALL2Q8IY33 904 aa18.96■□□□□ 0.63
PCDHGC3-204ENST00000617222 HDAC9Q9UKV0 1011 aa18.96■□□□□ 0.63
PCDHGC3-204ENST00000617222 TIAM2Q8IVF5 1701 aa18.96■□□□□ 0.63
PCDHGC3-204ENST00000617222 LMOD1P29536 600 aaPredicted RBP18.95■□□□□ 0.62
PCDHGC3-204ENST00000617222 EPS15P42566 896 aa18.95■□□□□ 0.62
PCDHGC3-204ENST00000617222 MAP3K12Q12852 859 aa18.95■□□□□ 0.62
PCDHGC3-204ENST00000617222 DZIP1Q86YF9 867 aaKnown RBP18.95■□□□□ 0.62
PCDHGC3-204ENST00000617222 OGFOD1Q8N543 542 aa18.95■□□□□ 0.62
PCDHGC3-204ENST00000617222 ZNF526Q8TF50 670 aaPredicted RBP18.95■□□□□ 0.62
PCDHGC3-204ENST00000617222 L3MBTL3Q96JM7 780 aaPredicted RBP18.95■□□□□ 0.62
PCDHGC3-204ENST00000617222 GPRC5DQ9NZD1 345 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms