RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 PAG1Q9NWQ8 432 aa12.04□□□□□ -0.48
CLTCL1-209ENST00000617103 PRAG1Q86YV5 1406 aa12.04□□□□□ -0.48
CLTCL1-209ENST00000617103 LDHCP07864 332 aa12.04□□□□□ -0.48
CLTCL1-209ENST00000617103 ERMNQ8TAM6 284 aa12.04□□□□□ -0.48
CLTCL1-209ENST00000617103 PA2G4Q9UQ80 394 aaKnown RBP12.04□□□□□ -0.48
CLTCL1-209ENST00000617103 IQGAP2Q13576 1575 aa12.04□□□□□ -0.48
CLTCL1-209ENST00000617103 PTPRKQ15262 1439 aa12.04□□□□□ -0.48
CLTCL1-209ENST00000617103 BRD1O95696 1058 aa12.04□□□□□ -0.48
CLTCL1-209ENST00000617103 SNRPA1P09661 255 aaKnown RBP12.04□□□□□ -0.48
CLTCL1-209ENST00000617103 FBLN1P23142 703 aa12.04□□□□□ -0.48
CLTCL1-209ENST00000617103 ARHGAP25P42331 645 aa12.04□□□□□ -0.48
CLTCL1-209ENST00000617103 ARID5AQ03989 594 aa12.04□□□□□ -0.48
CLTCL1-209ENST00000617103 ZSCAN26Q16670 478 aa12.04□□□□□ -0.48
CLTCL1-209ENST00000617103 ANKLE2Q86XL3 938 aa12.04□□□□□ -0.48
CLTCL1-209ENST00000617103 SLF2Q8IX21 1173 aa12.04□□□□□ -0.48
CLTCL1-209ENST00000617103 TSC1Q92574 1164 aa12.04□□□□□ -0.48
CLTCL1-209ENST00000617103 CALML3P27482 149 aa12.04□□□□□ -0.48
CLTCL1-209ENST00000617103 MAP3K9P80192 1104 aa12.04□□□□□ -0.48
CLTCL1-209ENST00000617103 LINS1Q8NG48 757 aa12.04□□□□□ -0.48
CLTCL1-209ENST00000617103 LEO1Q8WVC0 666 aaPredicted RBP12.04□□□□□ -0.48
CLTCL1-209ENST00000617103 JARID2Q92833 1246 aaPredicted RBP12.04□□□□□ -0.48
CLTCL1-209ENST00000617103 CCDC160A6NGH7 325 aa12.03□□□□□ -0.48
CLTCL1-209ENST00000617103 PPFIBP2Q8ND30 876 aa12.03□□□□□ -0.48
CLTCL1-209ENST00000617103 IFT74Q96LB3 600 aa12.03□□□□□ -0.48
CLTCL1-209ENST00000617103 MRC2Q9UBG0 1479 aa12.03□□□□□ -0.48
CLTCL1-209ENST00000617103 GPTP24298 496 aa12.03□□□□□ -0.48
CLTCL1-209ENST00000617103 ATP2B3Q16720 1220 aa12.03□□□□□ -0.48
CLTCL1-209ENST00000617103 FAM173BQ6P4H8 233 aa12.03□□□□□ -0.48
CLTCL1-209ENST00000617103 CHST3Q7LGC8 479 aa12.03□□□□□ -0.48
CLTCL1-209ENST00000617103 DAAM2Q86T65 1068 aa12.03□□□□□ -0.48
CLTCL1-209ENST00000617103 LLPHQ9BRT6 129 aaKnown RBP12.03□□□□□ -0.48
CLTCL1-209ENST00000617103 RPS6KB1P23443 525 aa12.03□□□□□ -0.48
CLTCL1-209ENST00000617103 CCDC174Q6PII3 467 aa12.03□□□□□ -0.48
CLTCL1-209ENST00000617103 LMBR1LQ6UX01 489 aa12.03□□□□□ -0.48
CLTCL1-209ENST00000617103 ABCA10Q8WWZ4 1543 aa12.03□□□□□ -0.48
CLTCL1-209ENST00000617103 BAG3O95817 575 aa12.03□□□□□ -0.48
CLTCL1-209ENST00000617103 SLC9C2Q5TAH2 1124 aa12.03□□□□□ -0.48
CLTCL1-209ENST00000617103 CCDC50Q8IVM0 306 aa12.03□□□□□ -0.48
CLTCL1-209ENST00000617103 STX8Q9UNK0 236 aa12.03□□□□□ -0.48
CLTCL1-209ENST00000617103 PHF8Q9UPP1 1060 aa12.03□□□□□ -0.48
CLTCL1-209ENST00000617103 SMIM23A6NLE4 172 aa12.02□□□□□ -0.48
CLTCL1-209ENST00000617103 RNF113AO15541 343 aaKnown RBP12.02□□□□□ -0.48
CLTCL1-209ENST00000617103 C8orf74Q6P047 294 aa12.02□□□□□ -0.48
CLTCL1-209ENST00000617103 CYP26C1Q6V0L0 522 aa12.02□□□□□ -0.48
CLTCL1-209ENST00000617103 CRNKL1Q9BZJ0 848 aaKnown RBP12.02□□□□□ -0.48
CLTCL1-209ENST00000617103 CPSF2Q9P2I0 782 aaKnown RBP12.02□□□□□ -0.48
CLTCL1-209ENST00000617103 SERPINA10Q9UK55 444 aa12.02□□□□□ -0.48
CLTCL1-209ENST00000617103 SNX14Q9Y5W7 946 aa12.02□□□□□ -0.48
CLTCL1-209ENST00000617103 SNAPC4Q5SXM2 1469 aa12.02□□□□□ -0.49
CLTCL1-209ENST00000617103 IFNL2Q8IZJ0 200 aa12.02□□□□□ -0.49
CLTCL1-209ENST00000617103 OTUD7AQ8TE49 926 aaPredicted RBP12.02□□□□□ -0.49
CLTCL1-209ENST00000617103 VGLL3A8MV65 326 aa12.02□□□□□ -0.49
CLTCL1-209ENST00000617103 UBLCP1Q8WVY7 318 aaPredicted RBP12.02□□□□□ -0.49
CLTCL1-209ENST00000617103 CDC5LQ99459 802 aaKnown RBP12.02□□□□□ -0.49
CLTCL1-209ENST00000617103 TEX13AQ9BXU3 409 aaPredicted RBP12.02□□□□□ -0.49
CLTCL1-209ENST00000617103 ANKIB1Q9P2G1 1089 aa12.02□□□□□ -0.49
CLTCL1-209ENST00000617103 SLC4A4Q9Y6R1 1079 aa12.02□□□□□ -0.49
CLTCL1-209ENST00000617103 GOLGA6BA6NDN3 693 aa12.02□□□□□ -0.49
CLTCL1-209ENST00000617103 CALM1P0DP23 149 aa12.02□□□□□ -0.49
CLTCL1-209ENST00000617103 CALM2P0DP24 149 aa12.02□□□□□ -0.49
CLTCL1-209ENST00000617103 CALM3P0DP25 149 aa12.02□□□□□ -0.49
CLTCL1-209ENST00000617103 FERP16591 822 aa12.02□□□□□ -0.49
CLTCL1-209ENST00000617103 HPDP32754 393 aaPredicted RBP12.02□□□□□ -0.49
CLTCL1-209ENST00000617103 ANO1Q5XXA6 986 aa12.02□□□□□ -0.49
CLTCL1-209ENST00000617103 GPR161Q8N6U8 529 aaKnown RBP12.02□□□□□ -0.49
CLTCL1-209ENST00000617103 CCDC26Q8TAB7 109 aa12.02□□□□□ -0.49
CLTCL1-209ENST00000617103 XAGE3Q8WTP9 111 aa12.02□□□□□ -0.49
CLTCL1-209ENST00000617103 SREK1Q8WXA9 508 aaKnown RBP12.02□□□□□ -0.49
CLTCL1-209ENST00000617103 KRT2P35908 639 aa12.01□□□□□ -0.49
CLTCL1-209ENST00000617103 CCT6AP40227 531 aaKnown RBP12.01□□□□□ -0.49
CLTCL1-209ENST00000617103 PPFIA1Q13136 1202 aa12.01□□□□□ -0.49
CLTCL1-209ENST00000617103 TMTC1Q8IUR5 882 aa12.01□□□□□ -0.49
CLTCL1-209ENST00000617103 MLKLQ8NB16 471 aa12.01□□□□□ -0.49
CLTCL1-209ENST00000617103 FERMT2Q96AC1 680 aa12.01□□□□□ -0.49
CLTCL1-209ENST00000617103 KCNK9Q9NPC2 374 aa12.01□□□□□ -0.49
CLTCL1-209ENST00000617103 CLNS1AP54105 237 aaKnown RBP12.01□□□□□ -0.49
CLTCL1-209ENST00000617103 CALCOCO2Q13137 446 aa12.01□□□□□ -0.49
CLTCL1-209ENST00000617103 RILPL1Q5EBL4 403 aa12.01□□□□□ -0.49
CLTCL1-209ENST00000617103 COPS6Q7L5N1 327 aa12.01□□□□□ -0.49
CLTCL1-209ENST00000617103 TSNARE1Q96NA8 513 aa12.01□□□□□ -0.49
CLTCL1-209ENST00000617103 PUS7Q96PZ0 661 aaKnown RBP12.01□□□□□ -0.49
CLTCL1-209ENST00000617103 FERMT1Q9BQL6 677 aa12.01□□□□□ -0.49
CLTCL1-209ENST00000617103 POLKQ9UBT6 870 aa12.01□□□□□ -0.49
CLTCL1-209ENST00000617103 SWAP70Q9UH65 585 aa12.01□□□□□ -0.49
CLTCL1-209ENST00000617103 SGSM2O43147 1006 aa12.01□□□□□ -0.49
CLTCL1-209ENST00000617103 VIMP08670 466 aaKnown RBP12.01□□□□□ -0.49
CLTCL1-209ENST00000617103 ALDH3A1P30838 453 aa12.01□□□□□ -0.49
CLTCL1-209ENST00000617103 USP37Q86T82 979 aa12.01□□□□□ -0.49
CLTCL1-209ENST00000617103 KCNH3Q9ULD8 1083 aa12.01□□□□□ -0.49
CLTCL1-209ENST00000617103 AOX1Q06278 1338 aa12.01□□□□□ -0.49
CLTCL1-209ENST00000617103 DNMBPQ6XZF7 1577 aa12.01□□□□□ -0.49
CLTCL1-209ENST00000617103 TBC1D8BQ0IIM8 1120 aa12□□□□□ -0.49
CLTCL1-209ENST00000617103 KIF14Q15058 1648 aa12□□□□□ -0.49
CLTCL1-209ENST00000617103 BRD3Q15059 726 aa12□□□□□ -0.49
CLTCL1-209ENST00000617103 TRIM7Q9C029 511 aa12□□□□□ -0.49
CLTCL1-209ENST00000617103 PPP1R2P41236 205 aa12□□□□□ -0.49
CLTCL1-209ENST00000617103 NLRP12P59046 1061 aa12□□□□□ -0.49
CLTCL1-209ENST00000617103 INTS8Q75QN2 995 aaKnown RBP12□□□□□ -0.49
CLTCL1-209ENST00000617103 GAS2L3Q86XJ1 694 aa12□□□□□ -0.49
CLTCL1-209ENST00000617103 GIGYF1O75420 1035 aaPredicted RBP12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms