RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 IQSEC3Q9UPP2 1182 aaPredicted RBP18.4■□□□□ 0.54
CBWD1-225ENST00000616944 IL1R1P14778 569 aa18.39■□□□□ 0.53
CBWD1-225ENST00000616944 CCDC93Q567U6 631 aa18.39■□□□□ 0.53
CBWD1-225ENST00000616944 DALRD3Q5D0E6 543 aaKnown RBP18.39■□□□□ 0.53
CBWD1-225ENST00000616944 DENND2AQ9ULE3 1009 aa18.39■□□□□ 0.53
CBWD1-225ENST00000616944 TTF1Q15361 905 aaPredicted RBP18.38■□□□□ 0.53
CBWD1-225ENST00000616944 PSMD1Q99460 953 aa18.38■□□□□ 0.53
CBWD1-225ENST00000616944 IL25Q9H293 177 aa18.38■□□□□ 0.53
CBWD1-225ENST00000616944 CD209Q9NNX6 404 aa18.38■□□□□ 0.53
CBWD1-225ENST00000616944 SOGA3Q5TF21 947 aa18.38■□□□□ 0.53
CBWD1-225ENST00000616944 CASC1Q6TDU7 716 aa18.38■□□□□ 0.53
CBWD1-225ENST00000616944 RTKN2Q8IZC4 609 aa18.38■□□□□ 0.53
CBWD1-225ENST00000616944 PIH1D3Q9NQM4 214 aaKnown RBP18.38■□□□□ 0.53
CBWD1-225ENST00000616944 HIP1O00291 1037 aa18.37■□□□□ 0.53
CBWD1-225ENST00000616944 WASHC4Q2M389 1173 aa18.37■□□□□ 0.53
CBWD1-225ENST00000616944 EYA3Q99504 573 aa18.37■□□□□ 0.53
CBWD1-225ENST00000616944 ESYT1Q9BSJ8 1104 aa18.37■□□□□ 0.53
CBWD1-225ENST00000616944 CHGBP05060 677 aa18.36■□□□□ 0.53
CBWD1-225ENST00000616944 ZC3H12CQ9C0D7 883 aaKnown RBP18.36■□□□□ 0.53
CBWD1-225ENST00000616944 COA1Q9GZY4 146 aa18.36■□□□□ 0.53
CBWD1-225ENST00000616944 COL4A5P29400 1685 aa18.36■□□□□ 0.53
CBWD1-225ENST00000616944 SUPT20HQ8NEM7 779 aa18.35■□□□□ 0.53
CBWD1-225ENST00000616944 TSHZ2Q9NRE2 1034 aa18.35■□□□□ 0.53
CBWD1-225ENST00000616944 DIAPH3Q9NSV4 1193 aa18.35■□□□□ 0.53
CBWD1-225ENST00000616944 SALL1Q9NSC2 1324 aa18.35■□□□□ 0.53
CBWD1-225ENST00000616944 A0A0D9SFI3 127 aa18.34■□□□□ 0.53
CBWD1-225ENST00000616944 RIMBP2O15034 1052 aa18.34■□□□□ 0.53
CBWD1-225ENST00000616944 SGSM2O43147 1006 aa18.34■□□□□ 0.53
CBWD1-225ENST00000616944 KIAA2012Q0VF49 1180 aa18.34■□□□□ 0.53
CBWD1-225ENST00000616944 NMIQ13287 307 aaPredicted RBP18.34■□□□□ 0.53
CBWD1-225ENST00000616944 CWC27Q6UX04 472 aaKnown RBP18.34■□□□□ 0.53
CBWD1-225ENST00000616944 FAM227BQ96M60 508 aa18.34■□□□□ 0.53
CBWD1-225ENST00000616944 RAD50Q92878 1312 aa18.34■□□□□ 0.53
CBWD1-225ENST00000616944 WWC3Q9ULE0 1092 aa18.34■□□□□ 0.53
CBWD1-225ENST00000616944 MYH2Q9UKX2 1941 aa18.33■□□□□ 0.53
CBWD1-225ENST00000616944 DICER1Q9UPY3 1922 aaKnown RBP18.33■□□□□ 0.53
CBWD1-225ENST00000616944 RNF113AO15541 343 aaKnown RBP18.33■□□□□ 0.52
CBWD1-225ENST00000616944 FRAT2O75474 233 aaPredicted RBP18.33■□□□□ 0.52
CBWD1-225ENST00000616944 ZFYP08048 801 aaPredicted RBP18.33■□□□□ 0.52
CBWD1-225ENST00000616944 ZMYM1Q5SVZ6 1142 aa18.33■□□□□ 0.52
CBWD1-225ENST00000616944 BCS1LQ9Y276 419 aa18.33■□□□□ 0.52
CBWD1-225ENST00000616944 SBF1O95248 1867 aa18.33■□□□□ 0.52
CBWD1-225ENST00000616944 FAM205AQ6ZU69 1335 aa18.32■□□□□ 0.52
CBWD1-225ENST00000616944 IDH1O75874 414 aaKnown RBP18.32■□□□□ 0.52
CBWD1-225ENST00000616944 ADD2P35612 726 aa18.32■□□□□ 0.52
CBWD1-225ENST00000616944 MFAP1P55081 439 aaKnown RBP18.32■□□□□ 0.52
CBWD1-225ENST00000616944 LRRFIP1Q32MZ4 808 aaKnown RBP18.32■□□□□ 0.52
CBWD1-225ENST00000616944 SLFNL1Q499Z3 407 aa18.32■□□□□ 0.52
CBWD1-225ENST00000616944 RUFY2Q8WXA3 655 aa18.32■□□□□ 0.52
CBWD1-225ENST00000616944 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.32■□□□□ 0.52
CBWD1-225ENST00000616944 TCRBV5S4A2TA0A5A2 114 aa18.31■□□□□ 0.52
CBWD1-225ENST00000616944 NFKBIEO00221 500 aa18.31■□□□□ 0.52
CBWD1-225ENST00000616944 PDE6AP16499 860 aa18.31■□□□□ 0.52
CBWD1-225ENST00000616944 AOC3Q16853 763 aa18.31■□□□□ 0.52
CBWD1-225ENST00000616944 PODNQ7Z5L7 613 aa18.31■□□□□ 0.52
CBWD1-225ENST00000616944 WDR66Q8TBY9 1149 aa18.31■□□□□ 0.52
CBWD1-225ENST00000616944 VPS33BQ9H267 617 aa18.31■□□□□ 0.52
CBWD1-225ENST00000616944 LTBP3Q9NS15 1303 aa18.31■□□□□ 0.52
CBWD1-225ENST00000616944 EIF5BO60841 1220 aaKnown RBP18.31■□□□□ 0.52
CBWD1-225ENST00000616944 MAP3K12Q12852 859 aa18.31■□□□□ 0.52
CBWD1-225ENST00000616944 CHAF1AQ13111 956 aaPredicted RBP18.31■□□□□ 0.52
CBWD1-225ENST00000616944 UBE3CQ15386 1083 aa18.31■□□□□ 0.52
CBWD1-225ENST00000616944 DOK7Q18PE1 504 aa18.31■□□□□ 0.52
CBWD1-225ENST00000616944 SLC9C2Q5TAH2 1124 aa18.31■□□□□ 0.52
CBWD1-225ENST00000616944 ZNF384Q8TF68 577 aa18.31■□□□□ 0.52
CBWD1-225ENST00000616944 SEC62Q99442 399 aaKnown RBP18.31■□□□□ 0.52
CBWD1-225ENST00000616944 IGSF3O75054 1194 aa18.3■□□□□ 0.52
CBWD1-225ENST00000616944 REC8O95072 547 aa18.3■□□□□ 0.52
CBWD1-225ENST00000616944 ZSCAN25Q6NSZ9 544 aa18.3■□□□□ 0.52
CBWD1-225ENST00000616944 ZNF589Q86UQ0 364 aaPredicted RBP18.3■□□□□ 0.52
CBWD1-225ENST00000616944 APPBP2Q92624 585 aa18.3■□□□□ 0.52
CBWD1-225ENST00000616944 OSBP2Q969R2 916 aa18.3■□□□□ 0.52
CBWD1-225ENST00000616944 DBNDD1Q9H9R9 158 aa18.3■□□□□ 0.52
CBWD1-225ENST00000616944 HELLSQ9NRZ9 838 aa18.3■□□□□ 0.52
CBWD1-225ENST00000616944 LRP2BPQ9P2M1 347 aa18.3■□□□□ 0.52
CBWD1-225ENST00000616944 ABCF2Q9UG63 623 aa18.3■□□□□ 0.52
CBWD1-225ENST00000616944 JAG2Q9Y219 1238 aa18.3■□□□□ 0.52
CBWD1-225ENST00000616944 MAST3O60307 1309 aa18.29■□□□□ 0.52
CBWD1-225ENST00000616944 CDK5RAP2Q96SN8 1893 aa18.29■□□□□ 0.52
CBWD1-225ENST00000616944 PPIP5K2O43314 1243 aa18.29■□□□□ 0.52
CBWD1-225ENST00000616944 ECE2O60344 883 aa18.29■□□□□ 0.52
CBWD1-225ENST00000616944 PRDX5P30044 214 aa18.29■□□□□ 0.52
CBWD1-225ENST00000616944 ZGPATQ8N5A5 531 aaKnown RBP18.29■□□□□ 0.52
CBWD1-225ENST00000616944 TAOK3Q9H2K8 898 aa18.29■□□□□ 0.52
CBWD1-225ENST00000616944 ZNF532Q9HCE3 1301 aa18.29■□□□□ 0.52
CBWD1-225ENST00000616944 MCMDC2Q4G0Z9 681 aa18.28■□□□□ 0.52
CBWD1-225ENST00000616944 MAGEB6Q8N7X4 407 aa18.28■□□□□ 0.52
CBWD1-225ENST00000616944 USP26Q9BXU7 913 aa18.28■□□□□ 0.52
CBWD1-225ENST00000616944 ZNF277Q9NRM2 450 aaPredicted RBP18.28■□□□□ 0.52
CBWD1-225ENST00000616944 M0R2C6 588 aa18.27■□□□□ 0.52
CBWD1-225ENST00000616944 EPB41L2O43491 1005 aaKnown RBP18.27■□□□□ 0.52
CBWD1-225ENST00000616944 TMED8Q6PL24 325 aaPredicted RBP18.27■□□□□ 0.52
CBWD1-225ENST00000616944 TBC1D22AQ8WUA7 517 aa18.27■□□□□ 0.52
CBWD1-225ENST00000616944 NSUN4Q96CB9 384 aaKnown RBP18.27■□□□□ 0.52
CBWD1-225ENST00000616944 LSG1Q9H089 658 aaKnown RBP18.27■□□□□ 0.52
CBWD1-225ENST00000616944 PUS7LQ9H0K6 701 aaKnown RBP18.27■□□□□ 0.52
CBWD1-225ENST00000616944 ADAMTSL1Q8N6G6 1762 aa18.27■□□□□ 0.52
CBWD1-225ENST00000616944 YDJCA8MPS7 323 aa18.27■□□□□ 0.51
CBWD1-225ENST00000616944 IARSP41252 1262 aaKnown RBP18.27■□□□□ 0.51
CBWD1-225ENST00000616944 GTF2IP78347 998 aa18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms