RNA–Protein interactions for RNA: ENST00000616383.1

MMP28-206, Transcript of matrix metallopeptidase 28, humanhuman

TSL 3

Gene MMP28, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-206ENST00000616383 EMP3P54852 163 aa13.4□□□□□ -0.26
MMP28-206ENST00000616383 GPSM2P81274 684 aa13.4□□□□□ -0.26
MMP28-206ENST00000616383 BMP2KLQ5H9B9 411 aa13.4□□□□□ -0.26
MMP28-206ENST00000616383 GORABQ5T7V8 394 aa13.4□□□□□ -0.26
MMP28-206ENST00000616383 SP8Q8IXZ3 490 aa13.4□□□□□ -0.26
MMP28-206ENST00000616383 CNKSR1Q969H4 720 aa13.4□□□□□ -0.26
MMP28-206ENST00000616383 ATP6V0A2Q9Y487 856 aa13.4□□□□□ -0.26
MMP28-206ENST00000616383 DOCK2Q92608 1830 aa13.39□□□□□ -0.27
MMP28-206ENST00000616383 A0A0G2JLW4 131 aa13.39□□□□□ -0.27
MMP28-206ENST00000616383 G3V3G9 751 aa13.39□□□□□ -0.27
MMP28-206ENST00000616383 ERC2O15083 957 aa13.39□□□□□ -0.27
MMP28-206ENST00000616383 GLRX3O76003 335 aaKnown RBP13.39□□□□□ -0.27
MMP28-206ENST00000616383 IFIT1P09914 478 aaKnown RBP13.39□□□□□ -0.27
MMP28-206ENST00000616383 UBE4AQ14139 1066 aa13.39□□□□□ -0.27
MMP28-206ENST00000616383 ZNF784Q8NCA9 323 aaPredicted RBP13.39□□□□□ -0.27
MMP28-206ENST00000616383 ANKIB1Q9P2G1 1089 aa13.39□□□□□ -0.27
MMP28-206ENST00000616383 CD2APQ9Y5K6 639 aa13.39□□□□□ -0.27
MMP28-206ENST00000616383 ZNF804BA4D1E1 1349 aa13.39□□□□□ -0.27
MMP28-206ENST00000616383 WTIPA6NIX2 430 aaPredicted RBP13.38□□□□□ -0.27
MMP28-206ENST00000616383 TGFB2P61812 414 aa13.38□□□□□ -0.27
MMP28-206ENST00000616383 TTC39AQ5SRH9 613 aa13.38□□□□□ -0.27
MMP28-206ENST00000616383 OLFM4Q6UX06 510 aa13.38□□□□□ -0.27
MMP28-206ENST00000616383 NSFL1CQ9UNZ2 370 aaKnown RBP13.38□□□□□ -0.27
MMP28-206ENST00000616383 FER1L6Q2WGJ9 1857 aa13.38□□□□□ -0.27
MMP28-206ENST00000616383 UFL1O94874 794 aa13.37□□□□□ -0.27
MMP28-206ENST00000616383 ATP5JP18859 108 aa13.37□□□□□ -0.27
MMP28-206ENST00000616383 KCNA3P22001 575 aa13.37□□□□□ -0.27
MMP28-206ENST00000616383 KLRK1P26718 216 aa13.37□□□□□ -0.27
MMP28-206ENST00000616383 PHKA1P46020 1223 aa13.37□□□□□ -0.27
MMP28-206ENST00000616383 MMRN1Q13201 1228 aa13.37□□□□□ -0.27
MMP28-206ENST00000616383 CCDC158Q5M9N0 1113 aa13.37□□□□□ -0.27
MMP28-206ENST00000616383 SPNS2Q8IVW8 549 aa13.37□□□□□ -0.27
MMP28-206ENST00000616383 TTLL6Q8N841 843 aa13.37□□□□□ -0.27
MMP28-206ENST00000616383 TMX4Q9H1E5 349 aaPredicted RBP13.37□□□□□ -0.27
MMP28-206ENST00000616383 PODXL2Q9NZ53 605 aa13.37□□□□□ -0.27
MMP28-206ENST00000616383 CIZ1Q9ULV3 898 aaPredicted RBP13.37□□□□□ -0.27
MMP28-206ENST00000616383 LEMD3Q9Y2U8 911 aa13.37□□□□□ -0.27
MMP28-206ENST00000616383 SNED1Q8TER0 1413 aa13.37□□□□□ -0.27
MMP28-206ENST00000616383 MAP4K4O95819 1239 aaPredicted RBP13.36□□□□□ -0.27
MMP28-206ENST00000616383 CHRM1P11229 460 aaPredicted RBP13.36□□□□□ -0.27
MMP28-206ENST00000616383 SDSP20132 328 aa13.36□□□□□ -0.27
MMP28-206ENST00000616383 C1QTNF8P60827 252 aa13.36□□□□□ -0.27
MMP28-206ENST00000616383 CCDC102BQ68D86 513 aa13.36□□□□□ -0.27
MMP28-206ENST00000616383 GPR101Q96P66 508 aaPredicted RBP13.36□□□□□ -0.27
MMP28-206ENST00000616383 BOLA2Q9H3K6 86 aa13.36□□□□□ -0.27
MMP28-206ENST00000616383 GGA1Q9UJY5 639 aa13.36□□□□□ -0.27
MMP28-206ENST00000616383 IRS2Q9Y4H2 1338 aa13.36□□□□□ -0.27
MMP28-206ENST00000616383 MAST2Q6P0Q8 1798 aa13.35□□□□□ -0.27
MMP28-206ENST00000616383 CHD4Q14839 1912 aa13.35□□□□□ -0.27
MMP28-206ENST00000616383 TRIM6-TRIM34B2RNG4 842 aa13.35□□□□□ -0.27
MMP28-206ENST00000616383 ATP2B4P23634 1241 aa13.35□□□□□ -0.27
MMP28-206ENST00000616383 GYG1P46976 350 aa13.35□□□□□ -0.27
MMP28-206ENST00000616383 MPNDQ8N594 471 aa13.35□□□□□ -0.27
MMP28-206ENST00000616383 TBC1D16Q8TBP0 767 aa13.35□□□□□ -0.27
MMP28-206ENST00000616383 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.35□□□□□ -0.27
MMP28-206ENST00000616383 PIM2Q9P1W9 311 aa13.35□□□□□ -0.27
MMP28-206ENST00000616383 MED23Q9ULK4 1368 aa13.34□□□□□ -0.27
MMP28-206ENST00000616383 CCDC88AQ3V6T2 1871 aa13.34□□□□□ -0.27
MMP28-206ENST00000616383 C6orf229H3BNL8 230 aa13.34□□□□□ -0.27
MMP28-206ENST00000616383 UQCRFS1P1P0C7P4 283 aa13.34□□□□□ -0.27
MMP28-206ENST00000616383 ARID4AP29374 1257 aaPredicted RBP13.34□□□□□ -0.27
MMP28-206ENST00000616383 BCAMP50895 628 aa13.34□□□□□ -0.27
MMP28-206ENST00000616383 SCARF1Q14162 830 aa13.34□□□□□ -0.27
MMP28-206ENST00000616383 DPP8Q6V1X1 898 aaPredicted RBP13.34□□□□□ -0.27
MMP28-206ENST00000616383 C7orf43Q8WVR3 580 aa13.34□□□□□ -0.27
MMP28-206ENST00000616383 ZNF512BQ96KM6 892 aaPredicted RBP13.34□□□□□ -0.27
MMP28-206ENST00000616383 DNAJC2Q99543 621 aaKnown RBP13.34□□□□□ -0.27
MMP28-206ENST00000616383 HAUS7Q99871 368 aa13.34□□□□□ -0.27
MMP28-206ENST00000616383 POLLQ9UGP5 575 aa13.34□□□□□ -0.27
MMP28-206ENST00000616383 NDUFB9Q9Y6M9 179 aa13.34□□□□□ -0.27
MMP28-206ENST00000616383 COL1A1P02452 1464 aaPredicted RBP13.34□□□□□ -0.27
MMP28-206ENST00000616383 ZNF646O15015 1829 aaPredicted RBP13.34□□□□□ -0.27
MMP28-206ENST00000616383 C21orf2O43822 256 aa13.33□□□□□ -0.28
MMP28-206ENST00000616383 CDC45O75419 566 aa13.33□□□□□ -0.28
MMP28-206ENST00000616383 MCAMP43121 646 aa13.33□□□□□ -0.28
MMP28-206ENST00000616383 PDAP1Q13442 181 aaKnown RBP13.33□□□□□ -0.28
MMP28-206ENST00000616383 CAVIN4Q5BKX8 364 aa13.33□□□□□ -0.28
MMP28-206ENST00000616383 DALRD3Q5D0E6 543 aaKnown RBP13.33□□□□□ -0.28
MMP28-206ENST00000616383 CC2D2BQ6DHV5 1058 aa13.33□□□□□ -0.28
MMP28-206ENST00000616383 C15orf52Q6ZUT6 534 aaKnown RBP13.33□□□□□ -0.28
MMP28-206ENST00000616383 TXNRD3Q86VQ6 643 aa13.33□□□□□ -0.28
MMP28-206ENST00000616383 CNTROBQ8N137 903 aa13.33□□□□□ -0.28
MMP28-206ENST00000616383 NLGN2Q8NFZ4 835 aa13.33□□□□□ -0.28
MMP28-206ENST00000616383 RILPL2Q969X0 211 aa13.33□□□□□ -0.28
MMP28-206ENST00000616383 FAM84BQ96KN1 310 aaPredicted RBP13.33□□□□□ -0.28
MMP28-206ENST00000616383 SNRKQ9NRH2 765 aa13.33□□□□□ -0.28
MMP28-206ENST00000616383 WWC3Q9ULE0 1092 aa13.33□□□□□ -0.28
MMP28-206ENST00000616383 PSME4Q14997 1843 aa13.33□□□□□ -0.28
MMP28-206ENST00000616383 HIBADHP31937 336 aaKnown RBP13.32□□□□□ -0.28
MMP28-206ENST00000616383 RASGRF1Q13972 1273 aa13.32□□□□□ -0.28
MMP28-206ENST00000616383 C8orf34Q49A92 452 aa13.32□□□□□ -0.28
MMP28-206ENST00000616383 CCDC93Q567U6 631 aa13.32□□□□□ -0.28
MMP28-206ENST00000616383 PI16Q6UXB8 463 aa13.32□□□□□ -0.28
MMP28-206ENST00000616383 FBXO33Q7Z6M2 555 aa13.32□□□□□ -0.28
MMP28-206ENST00000616383 VPS37DQ86XT2 251 aa13.32□□□□□ -0.28
MMP28-206ENST00000616383 EVI5LQ96CN4 794 aa13.32□□□□□ -0.28
MMP28-206ENST00000616383 EDC3Q96F86 508 aaKnown RBP13.32□□□□□ -0.28
MMP28-206ENST00000616383 FHDC1Q9C0D6 1143 aaPredicted RBP13.32□□□□□ -0.28
MMP28-206ENST00000616383 GNL3LQ9NVN8 582 aaKnown RBP13.32□□□□□ -0.28
MMP28-206ENST00000616383 PAG1Q9NWQ8 432 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms