RNA–Protein interactions for RNA: ENST00000615317.4

MMP28-205, Transcript of matrix metallopeptidase 28, humanhuman

TSL 2

Gene MMP28, Length 436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-205ENST00000615317 MAP4K4O95819 1239 aaPredicted RBP11.12□□□□□ -0.63
MMP28-205ENST00000615317 UQCRFS1P1P0C7P4 283 aa11.12□□□□□ -0.63
MMP28-205ENST00000615317 FBXO33Q7Z6M2 555 aa11.12□□□□□ -0.63
MMP28-205ENST00000615317 COA1Q9GZY4 146 aa11.12□□□□□ -0.63
MMP28-205ENST00000615317 BOLA2Q9H3K6 86 aa11.12□□□□□ -0.63
MMP28-205ENST00000615317 CD209Q9NNX6 404 aa11.12□□□□□ -0.63
MMP28-205ENST00000615317 SNRKQ9NRH2 765 aa11.12□□□□□ -0.63
MMP28-205ENST00000615317 GNL3LQ9NVN8 582 aaKnown RBP11.12□□□□□ -0.63
MMP28-205ENST00000615317 RNF181Q9P0P0 153 aa11.12□□□□□ -0.63
MMP28-205ENST00000615317 ZNF541Q9H0D2 1346 aa11.11□□□□□ -0.63
MMP28-205ENST00000615317 NAV1Q8NEY1 1877 aa11.11□□□□□ -0.63
MMP28-205ENST00000615317 YDJCA8MPS7 323 aa11.11□□□□□ -0.63
MMP28-205ENST00000615317 ERC2O15083 957 aa11.11□□□□□ -0.63
MMP28-205ENST00000615317 GSPT1P15170 499 aaKnown RBP11.11□□□□□ -0.63
MMP28-205ENST00000615317 LMNB1P20700 586 aa11.11□□□□□ -0.63
MMP28-205ENST00000615317 TTC22Q5TAA0 569 aa11.11□□□□□ -0.63
MMP28-205ENST00000615317 SPATA5Q8NB90 893 aa11.11□□□□□ -0.63
MMP28-205ENST00000615317 EDC3Q96F86 508 aaKnown RBP11.11□□□□□ -0.63
MMP28-205ENST00000615317 HMG20BQ9P0W2 317 aa11.11□□□□□ -0.63
MMP28-205ENST00000615317 FOCADQ5VW36 1801 aa11.1□□□□□ -0.63
MMP28-205ENST00000615317 GOLIM4O00461 696 aa11.1□□□□□ -0.63
MMP28-205ENST00000615317 SEMA3EO15041 775 aa11.1□□□□□ -0.63
MMP28-205ENST00000615317 GRIN3BO60391 1043 aa11.1□□□□□ -0.63
MMP28-205ENST00000615317 GLRX3O76003 335 aaKnown RBP11.1□□□□□ -0.63
MMP28-205ENST00000615317 IL1R1P14778 569 aa11.1□□□□□ -0.63
MMP28-205ENST00000615317 ATP5JP18859 108 aa11.1□□□□□ -0.63
MMP28-205ENST00000615317 ZAP70P43403 619 aa11.1□□□□□ -0.63
MMP28-205ENST00000615317 TDRD7Q8NHU6 1098 aaKnown RBP11.1□□□□□ -0.63
MMP28-205ENST00000615317 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.1□□□□□ -0.63
MMP28-205ENST00000615317 JDP2Q8WYK2 163 aa11.1□□□□□ -0.63
MMP28-205ENST00000615317 STAP2Q9UGK3 403 aa11.1□□□□□ -0.63
MMP28-205ENST00000615317 PDS5AQ29RF7 1337 aaKnown RBP11.09□□□□□ -0.63
MMP28-205ENST00000615317 LAMB1P07942 1786 aa11.09□□□□□ -0.63
MMP28-205ENST00000615317 RAD17O75943 681 aa11.09□□□□□ -0.63
MMP28-205ENST00000615317 GTF2IP78347 998 aa11.09□□□□□ -0.63
MMP28-205ENST00000615317 C9orf131Q5VYM1 1079 aa11.09□□□□□ -0.63
MMP28-205ENST00000615317 ZNF512BQ96KM6 892 aaPredicted RBP11.09□□□□□ -0.63
MMP28-205ENST00000615317 HAUS7Q99871 368 aa11.09□□□□□ -0.63
MMP28-205ENST00000615317 MXD3Q9BW11 206 aa11.09□□□□□ -0.63
MMP28-205ENST00000615317 OSBPL3Q9H4L5 887 aa11.09□□□□□ -0.63
MMP28-205ENST00000615317 ANTXR1Q9H6X2 564 aa11.09□□□□□ -0.63
MMP28-205ENST00000615317 KCNQ5Q9NR82 932 aa11.09□□□□□ -0.63
MMP28-205ENST00000615317 PAG1Q9NWQ8 432 aa11.09□□□□□ -0.63
MMP28-205ENST00000615317 DENND2AQ9ULE3 1009 aa11.09□□□□□ -0.63
MMP28-205ENST00000615317 DDX60LQ5H9U9 1706 aaKnown RBP11.09□□□□□ -0.63
MMP28-205ENST00000615317 MFSD14BQ5SR56 506 aa11.08□□□□□ -0.64
MMP28-205ENST00000615317 TBC1D9Q6ZT07 1266 aa11.08□□□□□ -0.64
MMP28-205ENST00000615317 PODNQ7Z5L7 613 aa11.08□□□□□ -0.64
MMP28-205ENST00000615317 VPS33BQ9H267 617 aa11.08□□□□□ -0.64
MMP28-205ENST00000615317 PIH1D3Q9NQM4 214 aaKnown RBP11.08□□□□□ -0.64
MMP28-205ENST00000615317 ABCF2Q9UG63 623 aa11.08□□□□□ -0.64
MMP28-205ENST00000615317 ZNRF3Q9ULT6 936 aa11.08□□□□□ -0.64
MMP28-205ENST00000615317 FAM205AQ6ZU69 1335 aa11.08□□□□□ -0.64
MMP28-205ENST00000615317 WDR90Q96KV7 1748 aa11.07□□□□□ -0.64
MMP28-205ENST00000615317 RFX7Q2KHR2 1363 aa11.07□□□□□ -0.64
MMP28-205ENST00000615317 TRIM6-TRIM34B2RNG4 842 aa11.07□□□□□ -0.64
MMP28-205ENST00000615317 PSMD14O00487 310 aa11.07□□□□□ -0.64
MMP28-205ENST00000615317 CYP2E1P05181 493 aaPredicted RBP11.07□□□□□ -0.64
MMP28-205ENST00000615317 PRDX5P30044 214 aa11.07□□□□□ -0.64
MMP28-205ENST00000615317 GRIK5Q16478 980 aa11.07□□□□□ -0.64
MMP28-205ENST00000615317 CERS5Q8N5B7 392 aa11.07□□□□□ -0.64
MMP28-205ENST00000615317 FSD1Q9BTV5 496 aa11.07□□□□□ -0.64
MMP28-205ENST00000615317 SCN4AP35499 1836 aa11.07□□□□□ -0.64
MMP28-205ENST00000615317 LAMA4Q16363 1823 aa11.07□□□□□ -0.64
MMP28-205ENST00000615317 SALL1Q9NSC2 1324 aa11.07□□□□□ -0.64
MMP28-205ENST00000615317 USP17L3A6NCW0 530 aa11.06□□□□□ -0.64
MMP28-205ENST00000615317 USP17L4A6NCW7 530 aa11.06□□□□□ -0.64
MMP28-205ENST00000615317 DCAF8L1A6NGE4 600 aa11.06□□□□□ -0.64
MMP28-205ENST00000615317 F8W031 263 aaPredicted RBP11.06□□□□□ -0.64
MMP28-205ENST00000615317 IDH1O75874 414 aaKnown RBP11.06□□□□□ -0.64
MMP28-205ENST00000615317 EIF6P56537 245 aaKnown RBP11.06□□□□□ -0.64
MMP28-205ENST00000615317 DACT2Q5SW24 774 aa11.06□□□□□ -0.64
MMP28-205ENST00000615317 CIAPIN1Q6FI81 312 aa11.06□□□□□ -0.64
MMP28-205ENST00000615317 USP17L1Q7RTZ2 530 aa11.06□□□□□ -0.64
MMP28-205ENST00000615317 CNTROBQ8N137 903 aa11.06□□□□□ -0.64
MMP28-205ENST00000615317 WDR66Q8TBY9 1149 aa11.06□□□□□ -0.64
MMP28-205ENST00000615317 RILPL2Q969X0 211 aa11.06□□□□□ -0.64
MMP28-205ENST00000615317 GJA3Q9Y6H8 435 aa11.06□□□□□ -0.64
MMP28-205ENST00000615317 UTRNP46939 3433 aa11.06□□□□□ -0.64
MMP28-205ENST00000615317 FZD9O00144 591 aa11.05□□□□□ -0.64
MMP28-205ENST00000615317 CHGBP05060 677 aa11.05□□□□□ -0.64
MMP28-205ENST00000615317 SDSP20132 328 aa11.05□□□□□ -0.64
MMP28-205ENST00000615317 CXCL9Q07325 125 aa11.05□□□□□ -0.64
MMP28-205ENST00000615317 BMP2KLQ5H9B9 411 aa11.05□□□□□ -0.64
MMP28-205ENST00000615317 STRIP1Q5VSL9 837 aa11.05□□□□□ -0.64
MMP28-205ENST00000615317 TTLL5Q6EMB2 1281 aa11.05□□□□□ -0.64
MMP28-205ENST00000615317 DZIP1Q86YF9 867 aaKnown RBP11.05□□□□□ -0.64
MMP28-205ENST00000615317 TBC1D22AQ8WUA7 517 aa11.05□□□□□ -0.64
MMP28-205ENST00000615317 RAI14Q9P0K7 980 aa11.05□□□□□ -0.64
MMP28-205ENST00000615317 ZBTB12Q9Y330 459 aaPredicted RBP11.05□□□□□ -0.64
MMP28-205ENST00000615317 BAZ2AQ9UIF9 1905 aaKnown RBP11.05□□□□□ -0.64
MMP28-205ENST00000615317 ZBTB22O15209 634 aa11.04□□□□□ -0.64
MMP28-205ENST00000615317 TTF1Q15361 905 aaPredicted RBP11.04□□□□□ -0.64
MMP28-205ENST00000615317 RSBN1LQ6PCB5 846 aaPredicted RBP11.04□□□□□ -0.64
MMP28-205ENST00000615317 KIAA0825Q8IV33 1275 aa11.04□□□□□ -0.64
MMP28-205ENST00000615317 ZGPATQ8N5A5 531 aaKnown RBP11.04□□□□□ -0.64
MMP28-205ENST00000615317 KBTBD3Q8NAB2 608 aa11.04□□□□□ -0.64
MMP28-205ENST00000615317 EVI5LQ96CN4 794 aa11.04□□□□□ -0.64
MMP28-205ENST00000615317 LRP2BPQ9P2M1 347 aa11.04□□□□□ -0.64
MMP28-205ENST00000615317 MYO3BQ8WXR4 1341 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms