RNA–Protein interactions for RNA: ENST00000614640.4

MSRB3-212, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MSRB3, Length 4,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-212ENST00000614640 MAP3K11Q16584 847 aa10.75□□□□□ -0.69
MSRB3-212ENST00000614640 METTL24Q5JXM2 366 aa10.75□□□□□ -0.69
MSRB3-212ENST00000614640 CLEC4GQ6UXB4 293 aa10.75□□□□□ -0.69
MSRB3-212ENST00000614640 LDHAL6AQ6ZMR3 332 aa10.75□□□□□ -0.69
MSRB3-212ENST00000614640 SETDB2Q96T68 719 aa10.75□□□□□ -0.69
MSRB3-212ENST00000614640 IFIT1P09914 478 aaKnown RBP10.74□□□□□ -0.69
MSRB3-212ENST00000614640 BICDL1Q6ZP65 573 aa10.74□□□□□ -0.69
MSRB3-212ENST00000614640 TICAM2Q86XR7 235 aa10.74□□□□□ -0.69
MSRB3-212ENST00000614640 PIBF1Q8WXW3 757 aa10.74□□□□□ -0.69
MSRB3-212ENST00000614640 OSBP2Q969R2 916 aa10.74□□□□□ -0.69
MSRB3-212ENST00000614640 BCL11BQ9C0K0 894 aaPredicted RBP10.74□□□□□ -0.69
MSRB3-212ENST00000614640 RNF113AO15541 343 aaKnown RBP10.74□□□□□ -0.69
MSRB3-212ENST00000614640 HMGB1P09429 215 aaKnown RBP10.74□□□□□ -0.69
MSRB3-212ENST00000614640 ADORA1P30542 326 aa10.74□□□□□ -0.69
MSRB3-212ENST00000614640 TRAPPC3LQ5T215 181 aa10.74□□□□□ -0.69
MSRB3-212ENST00000614640 RC3H1Q5TC82 1133 aaKnown RBP10.74□□□□□ -0.69
MSRB3-212ENST00000614640 TTLL5Q6EMB2 1281 aa10.74□□□□□ -0.69
MSRB3-212ENST00000614640 CKAP2LQ8IYA6 745 aa10.74□□□□□ -0.69
MSRB3-212ENST00000614640 LLPHQ9BRT6 129 aaKnown RBP10.74□□□□□ -0.69
MSRB3-212ENST00000614640 RRP9O43818 475 aaKnown RBP10.74□□□□□ -0.69
MSRB3-212ENST00000614640 C17orf53Q8N3J3 647 aaPredicted RBP10.74□□□□□ -0.69
MSRB3-212ENST00000614640 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.74□□□□□ -0.69
MSRB3-212ENST00000614640 KCNF1Q9H3M0 494 aa10.74□□□□□ -0.69
MSRB3-212ENST00000614640 SCARF1Q14162 830 aa10.73□□□□□ -0.69
MSRB3-212ENST00000614640 FAM182BQ5T319 152 aa10.73□□□□□ -0.69
MSRB3-212ENST00000614640 FAM200AQ8TCP9 573 aa10.73□□□□□ -0.69
MSRB3-212ENST00000614640 CLSTN2Q9H4D0 955 aa10.73□□□□□ -0.69
MSRB3-212ENST00000614640 CDHR2Q9BYE9 1310 aa10.73□□□□□ -0.69
MSRB3-212ENST00000614640 RXRBP28702 533 aa10.73□□□□□ -0.69
MSRB3-212ENST00000614640 HLFQ16534 295 aa10.73□□□□□ -0.69
MSRB3-212ENST00000614640 CHST3Q7LGC8 479 aa10.73□□□□□ -0.69
MSRB3-212ENST00000614640 CDC5LQ99459 802 aaKnown RBP10.73□□□□□ -0.69
MSRB3-212ENST00000614640 RPS6KA4O75676 772 aa10.73□□□□□ -0.69
MSRB3-212ENST00000614640 ITPK1Q13572 414 aa10.73□□□□□ -0.69
MSRB3-212ENST00000614640 TTC39AQ5SRH9 613 aa10.73□□□□□ -0.69
MSRB3-212ENST00000614640 LUZP1Q86V48 1076 aa10.73□□□□□ -0.69
MSRB3-212ENST00000614640 FTOQ9C0B1 505 aaKnown RBP eCLIP10.73□□□□□ -0.69
MSRB3-212ENST00000614640 TNMDQ9H2S6 317 aa10.73□□□□□ -0.69
MSRB3-212ENST00000614640 NCOA5Q9HCD5 579 aaKnown RBP10.73□□□□□ -0.69
MSRB3-212ENST00000614640 PTPDC1A2A3K4 754 aa10.72□□□□□ -0.69
MSRB3-212ENST00000614640 CTSWP56202 376 aa10.72□□□□□ -0.69
MSRB3-212ENST00000614640 ZSCAN16Q9H4T2 348 aaPredicted RBP10.72□□□□□ -0.69
MSRB3-212ENST00000614640 AKAP11Q9UKA4 1901 aa10.72□□□□□ -0.69
MSRB3-212ENST00000614640 MYH7P12883 1935 aa10.72□□□□□ -0.69
MSRB3-212ENST00000614640 ITGB4P16144 1822 aa10.72□□□□□ -0.69
MSRB3-212ENST00000614640 CNTNAP4Q9C0A0 1308 aa10.72□□□□□ -0.69
MSRB3-212ENST00000614640 PDIA3P30101 505 aaKnown RBP10.72□□□□□ -0.69
MSRB3-212ENST00000614640 CCT2P78371 535 aaKnown RBP10.72□□□□□ -0.69
MSRB3-212ENST00000614640 HSP90AA2PQ14568 343 aaPredicted RBP10.72□□□□□ -0.69
MSRB3-212ENST00000614640 INTS5Q6P9B9 1019 aaKnown RBP10.72□□□□□ -0.69
MSRB3-212ENST00000614640 TPTE2Q6XPS3 522 aa10.72□□□□□ -0.69
MSRB3-212ENST00000614640 ILDR1Q86SU0 546 aaPredicted RBP10.72□□□□□ -0.69
MSRB3-212ENST00000614640 NBPF5PQ86XG9 351 aaPredicted RBP10.72□□□□□ -0.69
MSRB3-212ENST00000614640 SLC4A9Q96Q91 983 aa10.72□□□□□ -0.69
MSRB3-212ENST00000614640 DDX19AQ9NUU7 478 aaKnown RBP10.72□□□□□ -0.69
MSRB3-212ENST00000614640 RIC1Q4ADV7 1423 aa10.72□□□□□ -0.69
MSRB3-212ENST00000614640 PLA2G12BQ9BX93 195 aa10.72□□□□□ -0.69
MSRB3-212ENST00000614640 UQCRHLA0A096LP55 91 aa10.72□□□□□ -0.69
MSRB3-212ENST00000614640 PPFIA3O75145 1194 aa10.72□□□□□ -0.69
MSRB3-212ENST00000614640 CSF1RP07333 972 aa10.72□□□□□ -0.69
MSRB3-212ENST00000614640 UQCRHP07919 91 aa10.72□□□□□ -0.69
MSRB3-212ENST00000614640 PLCB2Q00722 1185 aa10.72□□□□□ -0.69
MSRB3-212ENST00000614640 NOLC1Q14978 699 aaKnown RBP eCLIP10.72□□□□□ -0.69
MSRB3-212ENST00000614640 ANO6Q4KMQ2 910 aa10.72□□□□□ -0.69
MSRB3-212ENST00000614640 NAA16Q6N069 864 aaPredicted RBP10.72□□□□□ -0.69
MSRB3-212ENST00000614640 SYNE4Q8N205 404 aa10.72□□□□□ -0.69
MSRB3-212ENST00000614640 XAGE2Q96GT9 111 aa10.72□□□□□ -0.69
MSRB3-212ENST00000614640 CBX8Q9HC52 389 aa10.72□□□□□ -0.69
MSRB3-212ENST00000614640 GPHNQ9NQX3 736 aaPredicted RBP10.72□□□□□ -0.69
MSRB3-212ENST00000614640 SPTLC3Q9NUV7 552 aa10.72□□□□□ -0.69
MSRB3-212ENST00000614640 H3BQV1 296 aa10.71□□□□□ -0.69
MSRB3-212ENST00000614640 ITGA6P23229 1130 aa10.71□□□□□ -0.69
MSRB3-212ENST00000614640 IFFO2Q5TF58 517 aa10.71□□□□□ -0.69
MSRB3-212ENST00000614640 FBXL16Q8N461 479 aa10.71□□□□□ -0.69
MSRB3-212ENST00000614640 FDPSP14324 419 aaKnown RBP10.71□□□□□ -0.69
MSRB3-212ENST00000614640 EVCP57679 992 aa10.71□□□□□ -0.69
MSRB3-212ENST00000614640 FKBP4Q02790 459 aaKnown RBP eCLIP10.71□□□□□ -0.69
MSRB3-212ENST00000614640 SF3B2Q13435 895 aaKnown RBP10.71□□□□□ -0.69
MSRB3-212ENST00000614640 MYO5AQ9Y4I1 1855 aaKnown RBP10.71□□□□□ -0.7
MSRB3-212ENST00000614640 FOSBP53539 338 aa10.71□□□□□ -0.7
MSRB3-212ENST00000614640 FGD1P98174 961 aa10.71□□□□□ -0.7
MSRB3-212ENST00000614640 SLC27A3Q5K4L6 730 aa10.71□□□□□ -0.7
MSRB3-212ENST00000614640 SASS6Q6UVJ0 657 aa10.71□□□□□ -0.7
MSRB3-212ENST00000614640 PI16Q6UXB8 463 aa10.71□□□□□ -0.7
MSRB3-212ENST00000614640 GOLGA6L4A6NEF3 574 aa10.7□□□□□ -0.7
MSRB3-212ENST00000614640 ZNF34Q8IZ26 560 aa10.7□□□□□ -0.7
MSRB3-212ENST00000614640 ZNF274Q96GC6 653 aaPredicted RBP10.7□□□□□ -0.7
MSRB3-212ENST00000614640 NLRP3Q96P20 1036 aa10.7□□□□□ -0.7
MSRB3-212ENST00000614640 RCOR1Q9UKL0 485 aa10.7□□□□□ -0.7
MSRB3-212ENST00000614640 RGL2O15211 777 aa10.7□□□□□ -0.7
MSRB3-212ENST00000614640 CEBPZQ03701 1054 aaKnown RBP10.7□□□□□ -0.7
MSRB3-212ENST00000614640 BICD2Q8TD16 824 aa10.7□□□□□ -0.7
MSRB3-212ENST00000614640 TMX4Q9H1E5 349 aaPredicted RBP10.7□□□□□ -0.7
MSRB3-212ENST00000614640 GOLPH3LQ9H4A5 285 aa10.7□□□□□ -0.7
MSRB3-212ENST00000614640 PYCARDQ9ULZ3 195 aa10.7□□□□□ -0.7
MSRB3-212ENST00000614640 ONECUT3O60422 494 aaPredicted RBP10.7□□□□□ -0.7
MSRB3-212ENST00000614640 KIAA1524Q8TCG1 905 aa10.7□□□□□ -0.7
MSRB3-212ENST00000614640 USP28Q96RU2 1077 aa10.7□□□□□ -0.7
MSRB3-212ENST00000614640 PUS7LQ9H0K6 701 aaKnown RBP10.7□□□□□ -0.7
MSRB3-212ENST00000614640 CFAP45Q9UL16 551 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms