RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 MAPK8P45983 427 aa9.15□□□□□ -0.94
SCAMP1-205ENST00000614488 IKBKEQ14164 716 aa9.15□□□□□ -0.94
SCAMP1-205ENST00000614488 TXNRD3Q86VQ6 643 aa9.15□□□□□ -0.94
SCAMP1-205ENST00000614488 CARD10Q9BWT7 1032 aa9.15□□□□□ -0.94
SCAMP1-205ENST00000614488 GZF1Q9H116 711 aaPredicted RBP9.15□□□□□ -0.94
SCAMP1-205ENST00000614488 SOX17Q9H6I2 414 aaPredicted RBP9.15□□□□□ -0.94
SCAMP1-205ENST00000614488 NLRP2Q9NX02 1062 aa9.15□□□□□ -0.94
SCAMP1-205ENST00000614488 ITPKAP23677 461 aa9.14□□□□□ -0.95
SCAMP1-205ENST00000614488 GRIA4P48058 902 aa9.14□□□□□ -0.95
SCAMP1-205ENST00000614488 ARL4DP49703 201 aa9.14□□□□□ -0.95
SCAMP1-205ENST00000614488 ATP2B2Q01814 1243 aa9.14□□□□□ -0.95
SCAMP1-205ENST00000614488 PTPN12Q05209 780 aaKnown RBP9.14□□□□□ -0.95
SCAMP1-205ENST00000614488 GRM2Q14416 872 aa9.14□□□□□ -0.95
SCAMP1-205ENST00000614488 SUZ12Q15022 739 aaKnown RBP9.14□□□□□ -0.95
SCAMP1-205ENST00000614488 FOXD4L6Q3SYB3 417 aaPredicted RBP9.14□□□□□ -0.95
SCAMP1-205ENST00000614488 ALG1LQ6GMV1 187 aa9.14□□□□□ -0.95
SCAMP1-205ENST00000614488 FOXD4L3Q6VB84 417 aaPredicted RBP9.14□□□□□ -0.95
SCAMP1-205ENST00000614488 TMEM130Q8N3G9 435 aa9.14□□□□□ -0.95
SCAMP1-205ENST00000614488 EPS8L3Q8TE67 593 aaKnown RBP9.14□□□□□ -0.95
SCAMP1-205ENST00000614488 CLEC4MQ9H2X3 399 aaPredicted RBP9.14□□□□□ -0.95
SCAMP1-205ENST00000614488 ABCB6Q9NP58 842 aa9.14□□□□□ -0.95
SCAMP1-205ENST00000614488 LOC100996750A0A140TA64 210 aa9.13□□□□□ -0.95
SCAMP1-205ENST00000614488 EIF4EBP3O60516 100 aaPredicted RBP9.13□□□□□ -0.95
SCAMP1-205ENST00000614488 P4HBP07237 508 aaKnown RBP9.13□□□□□ -0.95
SCAMP1-205ENST00000614488 ESRRAP11474 423 aaPredicted RBP9.13□□□□□ -0.95
SCAMP1-205ENST00000614488 C19orf57Q0VDD7 668 aa9.13□□□□□ -0.95
SCAMP1-205ENST00000614488 KRTAP4-6Q9BYQ5 205 aa9.13□□□□□ -0.95
SCAMP1-205ENST00000614488 SOX1O00570 391 aaPredicted RBP9.12□□□□□ -0.95
SCAMP1-205ENST00000614488 SPRED3Q2MJR0 410 aa9.12□□□□□ -0.95
SCAMP1-205ENST00000614488 DNAJC14Q6Y2X3 702 aaPredicted RBP9.12□□□□□ -0.95
SCAMP1-205ENST00000614488 GLIS3Q8NEA6 775 aa9.12□□□□□ -0.95
SCAMP1-205ENST00000614488 SLC7A3Q8WY07 619 aa9.12□□□□□ -0.95
SCAMP1-205ENST00000614488 KLHDC7BQ96G42 594 aa9.12□□□□□ -0.95
SCAMP1-205ENST00000614488 ANKRD33BA6NCL7 494 aa9.11□□□□□ -0.95
SCAMP1-205ENST00000614488 F8W735 103 aaPredicted RBP9.11□□□□□ -0.95
SCAMP1-205ENST00000614488 PCDH1Q08174 1060 aa9.11□□□□□ -0.95
SCAMP1-205ENST00000614488 CCDC27Q2M243 656 aa9.11□□□□□ -0.95
SCAMP1-205ENST00000614488 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.11□□□□□ -0.95
SCAMP1-205ENST00000614488 PI16Q6UXB8 463 aa9.11□□□□□ -0.95
SCAMP1-205ENST00000614488 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.11□□□□□ -0.95
SCAMP1-205ENST00000614488 ZNF576Q9H609 170 aa9.11□□□□□ -0.95
SCAMP1-205ENST00000614488 AKTIPQ9H8T0 292 aa9.11□□□□□ -0.95
SCAMP1-205ENST00000614488 TMEM238LA0A1B0GVL6 79 aa9.1□□□□□ -0.95
SCAMP1-205ENST00000614488 ZBTB7CA1YPR0 619 aa9.1□□□□□ -0.95
SCAMP1-205ENST00000614488 ADAM11O75078 769 aa9.1□□□□□ -0.95
SCAMP1-205ENST00000614488 FGD1P98174 961 aa9.1□□□□□ -0.95
SCAMP1-205ENST00000614488 RPS26P11Q5JNZ5 115 aaPredicted RBP9.1□□□□□ -0.95
SCAMP1-205ENST00000614488 WFDC12Q8WWY7 111 aa9.1□□□□□ -0.95
SCAMP1-205ENST00000614488 FOXD4L4Q8WXT5 416 aaPredicted RBP9.1□□□□□ -0.95
SCAMP1-205ENST00000614488 PPP4R2Q9NY27 417 aa9.1□□□□□ -0.95
SCAMP1-205ENST00000614488 KCNK4Q9NYG8 393 aa9.1□□□□□ -0.95
SCAMP1-205ENST00000614488 XRCC5P13010 732 aaKnown RBP9.09□□□□□ -0.95
SCAMP1-205ENST00000614488 ERCC3P19447 782 aa9.09□□□□□ -0.95
SCAMP1-205ENST00000614488 NOS3P29474 1203 aa9.09□□□□□ -0.95
SCAMP1-205ENST00000614488 Q6ZS46 218 aa9.09□□□□□ -0.95
SCAMP1-205ENST00000614488 BCO2Q9BYV7 579 aa9.09□□□□□ -0.95
SCAMP1-205ENST00000614488 SRCIN1Q9C0H9 1055 aa9.09□□□□□ -0.95
SCAMP1-205ENST00000614488 ZFYVE1Q9HBF4 777 aa9.09□□□□□ -0.95
SCAMP1-205ENST00000614488 GIPC1O14908 333 aa9.08□□□□□ -0.96
SCAMP1-205ENST00000614488 WISP1O95388 367 aa9.08□□□□□ -0.96
SCAMP1-205ENST00000614488 B3GALT4O96024 378 aa9.08□□□□□ -0.96
SCAMP1-205ENST00000614488 LDHBP07195 334 aaKnown RBP9.08□□□□□ -0.96
SCAMP1-205ENST00000614488 DUOXA2Q1HG44 320 aa9.08□□□□□ -0.96
SCAMP1-205ENST00000614488 HGSNATQ68CP4 663 aa9.08□□□□□ -0.96
SCAMP1-205ENST00000614488 ACAD11Q709F0 780 aa9.08□□□□□ -0.96
SCAMP1-205ENST00000614488 NPAS4Q8IUM7 802 aa9.08□□□□□ -0.96
SCAMP1-205ENST00000614488 SSBP4Q9BWG4 385 aaPredicted RBP9.08□□□□□ -0.96
SCAMP1-205ENST00000614488 DDX3YO15523 660 aaKnown RBP9.07□□□□□ -0.96
SCAMP1-205ENST00000614488 IREB2P48200 963 aaKnown RBP9.07□□□□□ -0.96
SCAMP1-205ENST00000614488 NLRP12P59046 1061 aa9.07□□□□□ -0.96
SCAMP1-205ENST00000614488 ZNF423Q2M1K9 1284 aa9.07□□□□□ -0.96
SCAMP1-205ENST00000614488 UBASH3BQ8TF42 649 aa9.07□□□□□ -0.96
SCAMP1-205ENST00000614488 FRMD6Q96NE9 622 aa9.07□□□□□ -0.96
SCAMP1-205ENST00000614488 SETDB2Q96T68 719 aa9.07□□□□□ -0.96
SCAMP1-205ENST00000614488 TPSG1Q9NRR2 321 aa9.07□□□□□ -0.96
SCAMP1-205ENST00000614488 WWC3Q9ULE0 1092 aa9.07□□□□□ -0.96
SCAMP1-205ENST00000614488 PRPF40AO75400 957 aaKnown RBP9.06□□□□□ -0.96
SCAMP1-205ENST00000614488 EAPPQ56P03 285 aaPredicted RBP9.06□□□□□ -0.96
SCAMP1-205ENST00000614488 KIAA1211Q6ZU35 1233 aa9.06□□□□□ -0.96
SCAMP1-205ENST00000614488 DDX54Q8TDD1 881 aaKnown RBP9.06□□□□□ -0.96
SCAMP1-205ENST00000614488 SPG7Q9UQ90 795 aa9.06□□□□□ -0.96
SCAMP1-205ENST00000614488 FCGRTP55899 365 aa9.05□□□□□ -0.96
SCAMP1-205ENST00000614488 NXPE4Q6UWF7 544 aa9.05□□□□□ -0.96
SCAMP1-205ENST00000614488 DTHD1Q6ZMT9 781 aa9.05□□□□□ -0.96
SCAMP1-205ENST00000614488 DZIP1LQ8IYY4 767 aaKnown RBP9.05□□□□□ -0.96
SCAMP1-205ENST00000614488 NRSN2Q9GZP1 204 aa9.05□□□□□ -0.96
SCAMP1-205ENST00000614488 ALX3O95076 343 aa9.04□□□□□ -0.96
SCAMP1-205ENST00000614488 GSTM4Q03013 218 aa9.04□□□□□ -0.96
SCAMP1-205ENST00000614488 DOC2BQ14184 412 aa9.04□□□□□ -0.96
SCAMP1-205ENST00000614488 AGGF1Q8N302 714 aaeCLIP9.04□□□□□ -0.96
SCAMP1-205ENST00000614488 MEGF10Q96KG7 1140 aa9.04□□□□□ -0.96
SCAMP1-205ENST00000614488 CEP41Q9BYV8 373 aa9.04□□□□□ -0.96
SCAMP1-205ENST00000614488 RNF208Q9H0X6 261 aa9.04□□□□□ -0.96
SCAMP1-205ENST00000614488 LOC100289279A0A1B0GTE1 492 aa9.03□□□□□ -0.96
SCAMP1-205ENST00000614488 GSTT1P30711 240 aa9.03□□□□□ -0.96
SCAMP1-205ENST00000614488 RUSC1Q9BVN2 902 aa9.03□□□□□ -0.96
SCAMP1-205ENST00000614488 USP26Q9BXU7 913 aa9.03□□□□□ -0.96
SCAMP1-205ENST00000614488 OSBPL7Q9BZF2 842 aa9.03□□□□□ -0.96
SCAMP1-205ENST00000614488 C12orf49Q9H741 205 aa9.03□□□□□ -0.96
SCAMP1-205ENST00000614488 MEGF11A6BM72 1044 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms