RNA–Protein interactions for RNA: ENST00000614293.4

ABCA2-223, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5 BASIC

Gene ABCA2, Length 8,146 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-223	ENST00000614293	PRPF40B	Q6NWY9	871 aa	Known RBP	13.73	□□□□□ -0.21
ABCA2-223	ENST00000614293	GPR162	Q16538	588 aa		13.73	□□□□□ -0.21
ABCA2-223	ENST00000614293	GPR161	Q8N6U8	529 aa	Known RBP	13.73	□□□□□ -0.21
ABCA2-223	ENST00000614293	SEPT10	Q9P0V9	454 aa		13.73	□□□□□ -0.21
ABCA2-223	ENST00000614293	NKTR	P30414	1462 aa	Known RBP	13.73	□□□□□ -0.21
ABCA2-223	ENST00000614293	PFDN6	O15212	129 aa		13.73	□□□□□ -0.21
ABCA2-223	ENST00000614293	P4HA1	P13674	534 aa		13.73	□□□□□ -0.21
ABCA2-223	ENST00000614293	HSPA4	P34932	840 aa		13.73	□□□□□ -0.21
ABCA2-223	ENST00000614293	SARNP	P82979	210 aa	Known RBP	13.73	□□□□□ -0.21
ABCA2-223	ENST00000614293	RTN1	Q16799	776 aa		13.73	□□□□□ -0.21
ABCA2-223	ENST00000614293	MICU3	Q86XE3	530 aa		13.73	□□□□□ -0.21
ABCA2-223	ENST00000614293	FAM204A	Q9H8W3	233 aa		13.73	□□□□□ -0.21
ABCA2-223	ENST00000614293	ORC3	Q9UBD5	711 aa	Predicted RBP	13.73	□□□□□ -0.21
ABCA2-223	ENST00000614293	NPHP3	Q7Z494	1330 aa		13.73	□□□□□ -0.21
ABCA2-223	ENST00000614293	AKR1B10	O60218	316 aa		13.73	□□□□□ -0.21
ABCA2-223	ENST00000614293	MNAT1	P51948	309 aa		13.73	□□□□□ -0.21
ABCA2-223	ENST00000614293	MTUS1	Q9ULD2	1270 aa		13.73	□□□□□ -0.21
ABCA2-223	ENST00000614293	ATP5D	P30049	168 aa		13.73	□□□□□ -0.21
ABCA2-223	ENST00000614293	GLT8D2	Q9H1C3	349 aa		13.73	□□□□□ -0.21
ABCA2-223	ENST00000614293	SLC12A5	Q9H2X9	1139 aa		13.73	□□□□□ -0.21
ABCA2-223	ENST00000614293	KCNG1	Q9UIX4	513 aa		13.73	□□□□□ -0.21
ABCA2-223	ENST00000614293	AFG3L2	Q9Y4W6	797 aa		13.73	□□□□□ -0.21
ABCA2-223	ENST00000614293	MAGEB6P1	A0A0J9YX57	407 aa		13.72	□□□□□ -0.21
ABCA2-223	ENST00000614293	KRT222	Q8N1A0	295 aa		13.72	□□□□□ -0.21
ABCA2-223	ENST00000614293	EXOC7	Q9UPT5	735 aa		13.72	□□□□□ -0.21
ABCA2-223	ENST00000614293	HMGB3	O15347	200 aa	Known RBP	13.72	□□□□□ -0.21
ABCA2-223	ENST00000614293	FOXO3	O43524	673 aa		13.72	□□□□□ -0.21
ABCA2-223	ENST00000614293	ZNF449	Q6P9G9	518 aa		13.72	□□□□□ -0.21
ABCA2-223	ENST00000614293	MAP3K2	Q9Y2U5	619 aa		13.72	□□□□□ -0.21
ABCA2-223	ENST00000614293	ERCC5	P28715	1186 aa	Predicted RBP	13.72	□□□□□ -0.21
ABCA2-223	ENST00000614293	ITIH3	Q06033	890 aa		13.72	□□□□□ -0.21
ABCA2-223	ENST00000614293	FSIP1	Q8NA03	581 aa		13.72	□□□□□ -0.21
ABCA2-223	ENST00000614293	ABCC11	Q96J66	1382 aa		13.72	□□□□□ -0.21
ABCA2-223	ENST00000614293	OAT	P04181	439 aa		13.72	□□□□□ -0.21
ABCA2-223	ENST00000614293	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.72	□□□□□ -0.21
ABCA2-223	ENST00000614293	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.72	□□□□□ -0.21
ABCA2-223	ENST00000614293	ABCA10	Q8WWZ4	1543 aa		13.72	□□□□□ -0.21
ABCA2-223	ENST00000614293	TMEM110-MUSTN1	A8MSY1	372 aa		13.72	□□□□□ -0.21
ABCA2-223	ENST00000614293	CPSF2	Q9P2I0	782 aa	Known RBP	13.72	□□□□□ -0.21
ABCA2-223	ENST00000614293	USP16	Q9Y5T5	823 aa		13.72	□□□□□ -0.21
ABCA2-223	ENST00000614293	NSD3	Q9BZ95	1437 aa		13.72	□□□□□ -0.21
ABCA2-223	ENST00000614293	ZCRB1	Q8TBF4	217 aa	Known RBP	13.72	□□□□□ -0.21
ABCA2-223	ENST00000614293	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.72	□□□□□ -0.21
ABCA2-223	ENST00000614293	FAM8A1	Q9UBU6	413 aa		13.72	□□□□□ -0.21
ABCA2-223	ENST00000614293	WDR46	O15213	610 aa	Known RBP	13.71	□□□□□ -0.21
ABCA2-223	ENST00000614293	GJC1	P36383	396 aa		13.71	□□□□□ -0.21
ABCA2-223	ENST00000614293	TSGA10	Q9BZW7	698 aa		13.71	□□□□□ -0.21
ABCA2-223	ENST00000614293	AZI2	Q9H6S1	392 aa		13.71	□□□□□ -0.21
ABCA2-223	ENST00000614293	CCDC171	Q6TFL3	1326 aa		13.71	□□□□□ -0.21
ABCA2-223	ENST00000614293	ZBTB3	Q9H5J0	574 aa		13.71	□□□□□ -0.21
ABCA2-223	ENST00000614293	DDX19A	Q9NUU7	478 aa	Known RBP	13.71	□□□□□ -0.21
ABCA2-223	ENST00000614293	ANKFY1	Q9P2R3	1169 aa		13.71	□□□□□ -0.21
ABCA2-223	ENST00000614293	TYW5	A2RUC4	315 aa	Known RBP	13.71	□□□□□ -0.21
ABCA2-223	ENST00000614293	GUCY1B3	Q02153	619 aa		13.71	□□□□□ -0.21
ABCA2-223	ENST00000614293	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.71	□□□□□ -0.21	5e-7	■■■■■ 30.4
ABCA2-223	ENST00000614293	GOLGA8CP	A6NN73	597 aa		13.71	□□□□□ -0.22
ABCA2-223	ENST00000614293	LDHB	P07195	334 aa	Known RBP	13.71	□□□□□ -0.22
ABCA2-223	ENST00000614293	KRT5	P13647	590 aa		13.71	□□□□□ -0.22
ABCA2-223	ENST00000614293	RILPL1	Q5EBL4	403 aa		13.71	□□□□□ -0.22
ABCA2-223	ENST00000614293	FAM193B	Q96PV7	902 aa	Predicted RBP	13.71	□□□□□ -0.22
ABCA2-223	ENST00000614293	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.71	□□□□□ -0.22
ABCA2-223	ENST00000614293	CCT2	P78371	535 aa	Known RBP	13.71	□□□□□ -0.22
ABCA2-223	ENST00000614293	ALDH1L2	Q3SY69	923 aa		13.71	□□□□□ -0.22
ABCA2-223	ENST00000614293	KRT79	Q5XKE5	535 aa		13.71	□□□□□ -0.22
ABCA2-223	ENST00000614293	SLC4A4	Q9Y6R1	1079 aa		13.71	□□□□□ -0.22
ABCA2-223	ENST00000614293	ZBTB43	O43298	467 aa		13.7	□□□□□ -0.22
ABCA2-223	ENST00000614293	PPP1R7	Q15435	360 aa		13.7	□□□□□ -0.22
ABCA2-223	ENST00000614293	ZBTB21	Q9ULJ3	1066 aa		13.7	□□□□□ -0.22
ABCA2-223	ENST00000614293		H0YIN7	160 aa		13.7	□□□□□ -0.22
ABCA2-223	ENST00000614293	SPAG1	Q07617	926 aa		13.7	□□□□□ -0.22
ABCA2-223	ENST00000614293	CLUL1	Q15846	466 aa		13.7	□□□□□ -0.22
ABCA2-223	ENST00000614293	CDC37L1	Q7L3B6	337 aa		13.7	□□□□□ -0.22
ABCA2-223	ENST00000614293	MTRF1L	Q9UGC7	380 aa	Known RBP	13.7	□□□□□ -0.22
ABCA2-223	ENST00000614293	PIK3R4	Q99570	1358 aa		13.7	□□□□□ -0.22
ABCA2-223	ENST00000614293		H7C1D1	291 aa		13.7	□□□□□ -0.22
ABCA2-223	ENST00000614293	KIF3C	O14782	793 aa		13.7	□□□□□ -0.22
ABCA2-223	ENST00000614293	CD109	Q6YHK3	1445 aa		13.7	□□□□□ -0.22
ABCA2-223	ENST00000614293	N4BP3	O15049	544 aa		13.7	□□□□□ -0.22
ABCA2-223	ENST00000614293	TUBB4A	P04350	444 aa		13.7	□□□□□ -0.22
ABCA2-223	ENST00000614293	TRAPPC3L	Q5T215	181 aa		13.7	□□□□□ -0.22
ABCA2-223	ENST00000614293	STIM2	Q9P246	746 aa		13.7	□□□□□ -0.22
ABCA2-223	ENST00000614293	EXOC6B	Q9Y2D4	811 aa		13.7	□□□□□ -0.22
ABCA2-223	ENST00000614293	EPB41	P11171	864 aa	Known RBP	13.7	□□□□□ -0.22
ABCA2-223	ENST00000614293	HS1BP3	Q53T59	392 aa		13.7	□□□□□ -0.22
ABCA2-223	ENST00000614293	RRAGB	Q5VZM2	374 aa		13.7	□□□□□ -0.22
ABCA2-223	ENST00000614293	LIMCH1	Q9UPQ0	1083 aa		13.7	□□□□□ -0.22
ABCA2-223	ENST00000614293	LMTK3	Q96Q04	1460 aa		13.7	□□□□□ -0.22
ABCA2-223	ENST00000614293	CSAD	Q9Y600	493 aa		13.69	□□□□□ -0.22
ABCA2-223	ENST00000614293	EAPP	Q56P03	285 aa	Predicted RBP	13.69	□□□□□ -0.22
ABCA2-223	ENST00000614293	LIN9	Q5TKA1	542 aa		13.69	□□□□□ -0.22
ABCA2-223	ENST00000614293	TAOK1	Q7L7X3	1001 aa		13.69	□□□□□ -0.22
ABCA2-223	ENST00000614293	NEK11	Q8NG66	645 aa		13.69	□□□□□ -0.22
ABCA2-223	ENST00000614293	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.69	□□□□□ -0.22
ABCA2-223	ENST00000614293	TEX14	Q8IWB6	1497 aa		13.69	□□□□□ -0.22
ABCA2-223	ENST00000614293	ESYT2	A0FGR8	921 aa		13.69	□□□□□ -0.22
ABCA2-223	ENST00000614293	CLGN	O14967	610 aa		13.69	□□□□□ -0.22
ABCA2-223	ENST00000614293	SH2D4B	Q5SQS7	431 aa		13.69	□□□□□ -0.22
ABCA2-223	ENST00000614293	AMOTL2	Q9Y2J4	779 aa		13.69	□□□□□ -0.22
ABCA2-223	ENST00000614293	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	13.68	□□□□□ -0.22
ABCA2-223	ENST00000614293	ACSBG1	Q96GR2	724 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms