RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 STK38Q15208 465 aa17.6■□□□□ 0.41
PCDHGB1-202ENST00000611598 ORAI2Q96SN7 254 aa17.6■□□□□ 0.41
PCDHGB1-202ENST00000611598 SF3A1Q15459 793 aaKnown RBP17.59■□□□□ 0.41
PCDHGB1-202ENST00000611598 ISM2Q6H9L7 571 aa17.59■□□□□ 0.41
PCDHGB1-202ENST00000611598 ATG9AQ7Z3C6 839 aa17.59■□□□□ 0.41
PCDHGB1-202ENST00000611598 A0A1W2PQ27 194 aa17.59■□□□□ 0.41
PCDHGB1-202ENST00000611598 A0A1W2PQ64 194 aa17.59■□□□□ 0.41
PCDHGB1-202ENST00000611598 A0A1W2PQD8 194 aa17.59■□□□□ 0.41
PCDHGB1-202ENST00000611598 M0R2C6 588 aa17.59■□□□□ 0.41
PCDHGB1-202ENST00000611598 L2HGDHQ9H9P8 463 aa17.59■□□□□ 0.41
PCDHGB1-202ENST00000611598 SFPQP23246 707 aaKnown RBP eCLIP17.58■□□□□ 0.41
PCDHGB1-202ENST00000611598 NCAPHQ15003 741 aa17.58■□□□□ 0.41
PCDHGB1-202ENST00000611598 ZRSR1Q15695 479 aaKnown RBP17.58■□□□□ 0.41
PCDHGB1-202ENST00000611598 ADAMTS7Q9UKP4 1686 aa17.58■□□□□ 0.41
PCDHGB1-202ENST00000611598 AFDNP55196 1824 aaKnown RBP17.58■□□□□ 0.4
PCDHGB1-202ENST00000611598 HAND2P61296 217 aa17.58■□□□□ 0.4
PCDHGB1-202ENST00000611598 KIF2AO00139 706 aaPredicted RBP17.57■□□□□ 0.4
PCDHGB1-202ENST00000611598 LMOD1P29536 600 aaPredicted RBP17.57■□□□□ 0.4
PCDHGB1-202ENST00000611598 CCDC150Q8NCX0 1101 aa17.57■□□□□ 0.4
PCDHGB1-202ENST00000611598 KDM4FA0A1W2PPD8 638 aa17.57■□□□□ 0.4
PCDHGB1-202ENST00000611598 SPTLC2O15270 562 aa17.57■□□□□ 0.4
PCDHGB1-202ENST00000611598 ZNF202O95125 648 aa17.57■□□□□ 0.4
PCDHGB1-202ENST00000611598 SLC3A2P08195 630 aaKnown RBP17.57■□□□□ 0.4
PCDHGB1-202ENST00000611598 ATP1A3P13637 1013 aa17.57■□□□□ 0.4
PCDHGB1-202ENST00000611598 FOXO4P98177 505 aa17.57■□□□□ 0.4
PCDHGB1-202ENST00000611598 CCDC93Q567U6 631 aa17.57■□□□□ 0.4
PCDHGB1-202ENST00000611598 C8orf76Q96K31 380 aa17.57■□□□□ 0.4
PCDHGB1-202ENST00000611598 BPIFA3Q9BQP9 254 aa17.57■□□□□ 0.4
PCDHGB1-202ENST00000611598 KIF28PB7ZC32 967 aa17.56■□□□□ 0.4
PCDHGB1-202ENST00000611598 H2AFXP16104 143 aaPredicted RBP17.56■□□□□ 0.4
PCDHGB1-202ENST00000611598 OSBP2Q969R2 916 aa17.56■□□□□ 0.4
PCDHGB1-202ENST00000611598 LRRC24Q50LG9 513 aa17.56■□□□□ 0.4
PCDHGB1-202ENST00000611598 GORABQ5T7V8 394 aa17.56■□□□□ 0.4
PCDHGB1-202ENST00000611598 MYSM1Q5VVJ2 828 aa17.56■□□□□ 0.4
PCDHGB1-202ENST00000611598 KCNG4Q8TDN1 519 aa17.56■□□□□ 0.4
PCDHGB1-202ENST00000611598 MROH7-TTC4A0A0A0MT08 1334 aa17.56■□□□□ 0.4
PCDHGB1-202ENST00000611598 PSDA5PKW4 1024 aaPredicted RBP17.55■□□□□ 0.4
PCDHGB1-202ENST00000611598 FOXP2O15409 715 aa17.55■□□□□ 0.4
PCDHGB1-202ENST00000611598 SNRPA1P09661 255 aaKnown RBP17.55■□□□□ 0.4
PCDHGB1-202ENST00000611598 PHKG2P15735 406 aa17.55■□□□□ 0.4
PCDHGB1-202ENST00000611598 NLRP12P59046 1061 aa17.55■□□□□ 0.4
PCDHGB1-202ENST00000611598 ZNF594Q96JF6 807 aaPredicted RBP17.55■□□□□ 0.4
PCDHGB1-202ENST00000611598 HSD3B7Q9H2F3 369 aa17.55■□□□□ 0.4
PCDHGB1-202ENST00000611598 POLR3EQ9NVU0 708 aa17.55■□□□□ 0.4
PCDHGB1-202ENST00000611598 SLIT3O75094 1523 aa17.55■□□□□ 0.4
PCDHGB1-202ENST00000611598 CAMTA1Q9Y6Y1 1673 aa17.55■□□□□ 0.4
PCDHGB1-202ENST00000611598 A0A0U1RQG5 324 aaPredicted RBP17.55■□□□□ 0.4
PCDHGB1-202ENST00000611598 RNF113AO15541 343 aaKnown RBP17.55■□□□□ 0.4
PCDHGB1-202ENST00000611598 YEATS4O95619 227 aa17.55■□□□□ 0.4
PCDHGB1-202ENST00000611598 PFKFB1P16118 471 aa17.55■□□□□ 0.4
PCDHGB1-202ENST00000611598 CLCN6P51797 869 aa17.55■□□□□ 0.4
PCDHGB1-202ENST00000611598 ZC3H6P61129 1189 aaKnown RBP17.55■□□□□ 0.4
PCDHGB1-202ENST00000611598 PTPN21Q16825 1174 aa17.55■□□□□ 0.4
PCDHGB1-202ENST00000611598 FBXO18Q8NFZ0 1043 aa17.55■□□□□ 0.4
PCDHGB1-202ENST00000611598 RAPGEF4Q8WZA2 1011 aa17.55■□□□□ 0.4
PCDHGB1-202ENST00000611598 HPS5Q9UPZ3 1129 aa17.55■□□□□ 0.4
PCDHGB1-202ENST00000611598 IFIT1P09914 478 aaKnown RBP17.54■□□□□ 0.4
PCDHGB1-202ENST00000611598 AXDND1Q5T1B0 1012 aaPredicted RBP17.54■□□□□ 0.4
PCDHGB1-202ENST00000611598 ORC3Q9UBD5 711 aaPredicted RBP17.54■□□□□ 0.4
PCDHGB1-202ENST00000611598 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.54■□□□□ 0.4
PCDHGB1-202ENST00000611598 RGPD5Q99666 1765 aa17.54■□□□□ 0.4
PCDHGB1-202ENST00000611598 KLF18A0A0U1RQI7 1052 aa17.54■□□□□ 0.4
PCDHGB1-202ENST00000611598 GOLGA8BA8MQT2 603 aa17.54■□□□□ 0.4
PCDHGB1-202ENST00000611598 FANCGO15287 622 aa17.54■□□□□ 0.4
PCDHGB1-202ENST00000611598 MARCKSP29966 332 aaPredicted RBP17.54■□□□□ 0.4
PCDHGB1-202ENST00000611598 FANCCQ00597 558 aa17.54■□□□□ 0.4
PCDHGB1-202ENST00000611598 HSP90AB3PQ58FF7 597 aa17.54■□□□□ 0.4
PCDHGB1-202ENST00000611598 DPF2Q92785 391 aa17.54■□□□□ 0.4
PCDHGB1-202ENST00000611598 NLRP2Q9NX02 1062 aa17.54■□□□□ 0.4
PCDHGB1-202ENST00000611598 TAOK2Q9UL54 1235 aa17.54■□□□□ 0.4
PCDHGB1-202ENST00000611598 ARFGEF2Q9Y6D5 1785 aa17.53■□□□□ 0.4
PCDHGB1-202ENST00000611598 WDHD1O75717 1129 aaPredicted RBP17.53■□□□□ 0.4
PCDHGB1-202ENST00000611598 EVCP57679 992 aa17.53■□□□□ 0.4
PCDHGB1-202ENST00000611598 GOLGA8FQ08AF8 430 aa17.53■□□□□ 0.4
PCDHGB1-202ENST00000611598 GOLGA8DPQ0D2H9 430 aa17.53■□□□□ 0.4
PCDHGB1-202ENST00000611598 ARHGAP29Q52LW3 1261 aa17.53■□□□□ 0.4
PCDHGB1-202ENST00000611598 HOMER1Q86YM7 354 aa17.53■□□□□ 0.4
PCDHGB1-202ENST00000611598 TTC5Q8N0Z6 440 aa17.53■□□□□ 0.4
PCDHGB1-202ENST00000611598 FHOD1Q9Y613 1164 aa17.53■□□□□ 0.4
PCDHGB1-202ENST00000611598 ERICH4A6NGS2 130 aa17.53■□□□□ 0.4
PCDHGB1-202ENST00000611598 DNAI1Q9UI46 699 aa17.53■□□□□ 0.4
PCDHGB1-202ENST00000611598 SCN11AQ9UI33 1791 aa17.52■□□□□ 0.4
PCDHGB1-202ENST00000611598 PRC1O43663 620 aa17.52■□□□□ 0.4
PCDHGB1-202ENST00000611598 ANO1Q5XXA6 986 aa17.52■□□□□ 0.4
PCDHGB1-202ENST00000611598 A0A1B0GUL7 405 aa17.52■□□□□ 0.39
PCDHGB1-202ENST00000611598 FKBP4Q02790 459 aaKnown RBP eCLIP17.52■□□□□ 0.39
PCDHGB1-202ENST00000611598 AIFM3Q96NN9 605 aa17.52■□□□□ 0.39
PCDHGB1-202ENST00000611598 LMTK3Q96Q04 1460 aa17.51■□□□□ 0.39
PCDHGB1-202ENST00000611598 KCNJ6P48051 423 aa17.51■□□□□ 0.39
PCDHGB1-202ENST00000611598 ANTXR2P58335 489 aa17.51■□□□□ 0.39
PCDHGB1-202ENST00000611598 KIF23Q02241 960 aaPredicted RBP17.51■□□□□ 0.39
PCDHGB1-202ENST00000611598 PLBD2Q8NHP8 589 aa17.51■□□□□ 0.39
PCDHGB1-202ENST00000611598 PUS3Q9BZE2 481 aaKnown RBP17.51■□□□□ 0.39
PCDHGB1-202ENST00000611598 H7C1W4 665 aa17.51■□□□□ 0.39
PCDHGB1-202ENST00000611598 ETF1P62495 437 aaKnown RBP17.51■□□□□ 0.39
PCDHGB1-202ENST00000611598 TPM4P67936 248 aa17.51■□□□□ 0.39
PCDHGB1-202ENST00000611598 SYNE3Q6ZMZ3 975 aa17.51■□□□□ 0.39
PCDHGB1-202ENST00000611598 FBXL16Q8N461 479 aa17.51■□□□□ 0.39
PCDHGB1-202ENST00000611598 PODXL2Q9NZ53 605 aa17.51■□□□□ 0.39
PCDHGB1-202ENST00000611598 NWD2Q9ULI1 1742 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms