RNA–Protein interactions for RNA: ENST00000610974.1

RN7SL539P-201, Transcript of RNA, 7SL, cytoplasmic 539, pseudogene, humanhuman

BASIC

Gene RN7SL539P, Length 291 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL539P-201ENST00000610974 PPP2R3BQ9Y5P8 575 aa12.95□□□□□ -0.34
RN7SL539P-201ENST00000610974 CENPFP49454 3210 aa12.95□□□□□ -0.34
RN7SL539P-201ENST00000610974 A0A1B0GUL6 1792 aa12.94□□□□□ -0.34
RN7SL539P-201ENST00000610974 ANKRD18BA2A2Z9 1011 aa12.94□□□□□ -0.34
RN7SL539P-201ENST00000610974 SNAP23O00161 211 aa12.94□□□□□ -0.34
RN7SL539P-201ENST00000610974 PPP1R12BO60237 982 aaPredicted RBP12.94□□□□□ -0.34
RN7SL539P-201ENST00000610974 ZBTB48P10074 688 aaPredicted RBP12.94□□□□□ -0.34
RN7SL539P-201ENST00000610974 FKBP5Q13451 457 aaPredicted RBP12.94□□□□□ -0.34
RN7SL539P-201ENST00000610974 DNAAF4Q8WXU2 420 aa12.94□□□□□ -0.34
RN7SL539P-201ENST00000610974 CACNA1FO60840 1977 aa12.94□□□□□ -0.34
RN7SL539P-201ENST00000610974 MKI67P46013 3256 aaKnown RBP12.94□□□□□ -0.34
RN7SL539P-201ENST00000610974 SSC5DA1L4H1 1573 aa12.94□□□□□ -0.34
RN7SL539P-201ENST00000610974 UNCXA6NJT0 531 aa12.93□□□□□ -0.34
RN7SL539P-201ENST00000610974 MYO1BO43795 1136 aa12.93□□□□□ -0.34
RN7SL539P-201ENST00000610974 TAF5LO75529 589 aa12.93□□□□□ -0.34
RN7SL539P-201ENST00000610974 IL1R1P14778 569 aa12.93□□□□□ -0.34
RN7SL539P-201ENST00000610974 FKBP1AP62942 108 aaKnown RBP12.93□□□□□ -0.34
RN7SL539P-201ENST00000610974 SUPT20HL1Q3ZLR7 823 aa12.93□□□□□ -0.34
RN7SL539P-201ENST00000610974 WNK4Q96J92 1243 aa12.93□□□□□ -0.34
RN7SL539P-201ENST00000610974 CLMNQ96JQ2 1002 aa12.93□□□□□ -0.34
RN7SL539P-201ENST00000610974 PCDHAC2Q9Y5I4 1007 aa12.93□□□□□ -0.34
RN7SL539P-201ENST00000610974 IL16Q14005 1332 aa12.92□□□□□ -0.34
RN7SL539P-201ENST00000610974 SPDYE2BA6NHP3 402 aa12.92□□□□□ -0.34
RN7SL539P-201ENST00000610974 F8W031 263 aaPredicted RBP12.92□□□□□ -0.34
RN7SL539P-201ENST00000610974 IGF2BP3O00425 579 aaKnown RBP eCLIP12.92□□□□□ -0.34
RN7SL539P-201ENST00000610974 SPDYE6P0CI01 402 aa12.92□□□□□ -0.34
RN7SL539P-201ENST00000610974 FOXO4P98177 505 aa12.92□□□□□ -0.34
RN7SL539P-201ENST00000610974 IFIT5Q13325 482 aaKnown RBP12.92□□□□□ -0.34
RN7SL539P-201ENST00000610974 CFAP100Q494V2 611 aa12.92□□□□□ -0.34
RN7SL539P-201ENST00000610974 ZNF804AQ7Z570 1209 aa12.92□□□□□ -0.34
RN7SL539P-201ENST00000610974 HELBQ8NG08 1087 aaPredicted RBP12.92□□□□□ -0.34
RN7SL539P-201ENST00000610974 PRMT6Q96LA8 375 aaPredicted RBP12.92□□□□□ -0.34
RN7SL539P-201ENST00000610974 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.92□□□□□ -0.34
RN7SL539P-201ENST00000610974 TRIM17Q9Y577 477 aa12.92□□□□□ -0.34
RN7SL539P-201ENST00000610974 CLRN2A0PK11 232 aa12.91□□□□□ -0.34
RN7SL539P-201ENST00000610974 IREB2P48200 963 aaKnown RBP12.91□□□□□ -0.34
RN7SL539P-201ENST00000610974 NBPF12Q5TAG4 269 aaPredicted RBP12.91□□□□□ -0.34
RN7SL539P-201ENST00000610974 INTS3Q68E01 1043 aaKnown RBP12.91□□□□□ -0.34
RN7SL539P-201ENST00000610974 OTOP1Q7RTM1 612 aa12.91□□□□□ -0.34
RN7SL539P-201ENST00000610974 NCBP3Q53F19 620 aaKnown RBP12.9□□□□□ -0.34
RN7SL539P-201ENST00000610974 OTUD7BQ6GQQ9 843 aa12.9□□□□□ -0.34
RN7SL539P-201ENST00000610974 ANKRD13AQ8IZ07 590 aa12.9□□□□□ -0.34
RN7SL539P-201ENST00000610974 VEZTQ9HBM0 779 aa12.9□□□□□ -0.34
RN7SL539P-201ENST00000610974 CHMP3Q9Y3E7 222 aa12.9□□□□□ -0.34
RN7SL539P-201ENST00000610974 AOX1Q06278 1338 aa12.89□□□□□ -0.35
RN7SL539P-201ENST00000610974 FANCIQ9NVI1 1328 aa12.89□□□□□ -0.35
RN7SL539P-201ENST00000610974 VAMP4O75379 141 aa12.89□□□□□ -0.35
RN7SL539P-201ENST00000610974 USP2O75604 605 aaPredicted RBP12.89□□□□□ -0.35
RN7SL539P-201ENST00000610974 GJA5P36382 358 aa12.89□□□□□ -0.35
RN7SL539P-201ENST00000610974 RBM5P52756 815 aaKnown RBP eCLIP12.89□□□□□ -0.35
RN7SL539P-201ENST00000610974 CRHR2Q13324 411 aa12.89□□□□□ -0.35
RN7SL539P-201ENST00000610974 RASA3Q14644 834 aa12.89□□□□□ -0.35
RN7SL539P-201ENST00000610974 CCDC184Q52MB2 194 aa12.89□□□□□ -0.35
RN7SL539P-201ENST00000610974 GCC1Q96CN9 775 aa12.89□□□□□ -0.35
RN7SL539P-201ENST00000610974 ERO1AQ96HE7 468 aa12.89□□□□□ -0.35
RN7SL539P-201ENST00000610974 JAG2Q9Y219 1238 aa12.89□□□□□ -0.35
RN7SL539P-201ENST00000610974 BRCA2P51587 3418 aa12.89□□□□□ -0.35
RN7SL539P-201ENST00000610974 RBBP6Q7Z6E9 1792 aaKnown RBP12.89□□□□□ -0.35
RN7SL539P-201ENST00000610974 TESPA1A2RU30 521 aaPredicted RBP12.88□□□□□ -0.35
RN7SL539P-201ENST00000610974 POTEFA5A3E0 1075 aa12.88□□□□□ -0.35
RN7SL539P-201ENST00000610974 TNFAIP1Q13829 316 aa12.88□□□□□ -0.35
RN7SL539P-201ENST00000610974 CCDC57Q2TAC2 916 aa12.88□□□□□ -0.35
RN7SL539P-201ENST00000610974 BEND3Q5T5X7 828 aa12.88□□□□□ -0.35
RN7SL539P-201ENST00000610974 LMBR1LQ6UX01 489 aa12.88□□□□□ -0.35
RN7SL539P-201ENST00000610974 LDHAL6AQ6ZMR3 332 aa12.88□□□□□ -0.35
RN7SL539P-201ENST00000610974 ZNF594Q96JF6 807 aaPredicted RBP12.88□□□□□ -0.35
RN7SL539P-201ENST00000610974 PTPN18Q99952 460 aa12.88□□□□□ -0.35
RN7SL539P-201ENST00000610974 PTPN22Q9Y2R2 807 aa12.88□□□□□ -0.35
RN7SL539P-201ENST00000610974 FAM205AQ6ZU69 1335 aa12.88□□□□□ -0.35
RN7SL539P-201ENST00000610974 OTOFQ9HC10 1997 aa12.87□□□□□ -0.35
RN7SL539P-201ENST00000610974 F6X3S4 739 aa12.87□□□□□ -0.35
RN7SL539P-201ENST00000610974 PLIN1O60240 522 aa12.87□□□□□ -0.35
RN7SL539P-201ENST00000610974 SP3Q02447 781 aa12.87□□□□□ -0.35
RN7SL539P-201ENST00000610974 TAF7LQ5H9L4 462 aa12.87□□□□□ -0.35
RN7SL539P-201ENST00000610974 EPHA10Q5JZY3 1008 aa12.87□□□□□ -0.35
RN7SL539P-201ENST00000610974 CD99L2Q8TCZ2 262 aa12.87□□□□□ -0.35
RN7SL539P-201ENST00000610974 CNNM1Q9NRU3 951 aa12.87□□□□□ -0.35
RN7SL539P-201ENST00000610974 SERPINA10Q9UK55 444 aa12.87□□□□□ -0.35
RN7SL539P-201ENST00000610974 GRM8O00222 908 aa12.86□□□□□ -0.35
RN7SL539P-201ENST00000610974 SPDYE2Q495Y8 402 aa12.86□□□□□ -0.35
RN7SL539P-201ENST00000610974 MFSD14BQ5SR56 506 aa12.86□□□□□ -0.35
RN7SL539P-201ENST00000610974 TDRD7Q8NHU6 1098 aaKnown RBP12.86□□□□□ -0.35
RN7SL539P-201ENST00000610974 ARMC5Q96C12 935 aa12.86□□□□□ -0.35
RN7SL539P-201ENST00000610974 OPTNQ96CV9 577 aa12.86□□□□□ -0.35
RN7SL539P-201ENST00000610974 EFCC1Q9HA90 598 aa12.86□□□□□ -0.35
RN7SL539P-201ENST00000610974 ZNF70Q9UC06 446 aaPredicted RBP12.86□□□□□ -0.35
RN7SL539P-201ENST00000610974 TTF2Q9UNY4 1162 aaKnown RBP12.86□□□□□ -0.35
RN7SL539P-201ENST00000610974 ARAP2Q8WZ64 1704 aa12.85□□□□□ -0.35
RN7SL539P-201ENST00000610974 EXOSC9Q06265 439 aaKnown RBP12.85□□□□□ -0.35
RN7SL539P-201ENST00000610974 UBE4AQ14139 1066 aa12.85□□□□□ -0.35
RN7SL539P-201ENST00000610974 WDR63Q8IWG1 891 aa12.85□□□□□ -0.35
RN7SL539P-201ENST00000610974 MS4A4AQ96JQ5 239 aa12.85□□□□□ -0.35
RN7SL539P-201ENST00000610974 TEPSINQ96N21 525 aa12.85□□□□□ -0.35
RN7SL539P-201ENST00000610974 TDRD3Q9H7E2 651 aaKnown RBP12.85□□□□□ -0.35
RN7SL539P-201ENST00000610974 ELP3Q9H9T3 547 aa12.85□□□□□ -0.35
RN7SL539P-201ENST00000610974 HIBADHP31937 336 aaKnown RBP12.84□□□□□ -0.35
RN7SL539P-201ENST00000610974 GYG1P46976 350 aa12.84□□□□□ -0.35
RN7SL539P-201ENST00000610974 CAP1Q01518 475 aa12.84□□□□□ -0.35
RN7SL539P-201ENST00000610974 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.84□□□□□ -0.35
RN7SL539P-201ENST00000610974 DZIP1LQ8IYY4 767 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms