RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 GOPCQ9HD26 462 aa10.35□□□□□ -0.75
COL25A1-208ENST00000610288 POLKQ9UBT6 870 aa10.35□□□□□ -0.75
COL25A1-208ENST00000610288 SSH2Q76I76 1423 aa10.35□□□□□ -0.75
COL25A1-208ENST00000610288 DUOX2Q9NRD8 1548 aa10.35□□□□□ -0.75
COL25A1-208ENST00000610288 ANKRD62A6NC57 917 aa10.35□□□□□ -0.75
COL25A1-208ENST00000610288 WDHD1O75717 1129 aaPredicted RBP10.35□□□□□ -0.75
COL25A1-208ENST00000610288 ATP10BO94823 1461 aa10.35□□□□□ -0.75
COL25A1-208ENST00000610288 VAV2P52735 878 aa10.35□□□□□ -0.75
COL25A1-208ENST00000610288 DHX32Q7L7V1 743 aaKnown RBP10.35□□□□□ -0.75
COL25A1-208ENST00000610288 SCLT1Q96NL6 688 aa10.35□□□□□ -0.75
COL25A1-208ENST00000610288 NSRP1Q9H0G5 558 aaKnown RBP10.35□□□□□ -0.75
COL25A1-208ENST00000610288 TNRQ92752 1358 aa10.35□□□□□ -0.75
COL25A1-208ENST00000610288 AKR1B15C9JRZ8 316 aaPredicted RBP10.35□□□□□ -0.75
COL25A1-208ENST00000610288 ARHGAP25P42331 645 aa10.35□□□□□ -0.75
COL25A1-208ENST00000610288 GPR161Q8N6U8 529 aaKnown RBP10.35□□□□□ -0.75
COL25A1-208ENST00000610288 XAGE3Q8WTP9 111 aa10.35□□□□□ -0.75
COL25A1-208ENST00000610288 LLPHQ9BRT6 129 aaKnown RBP10.35□□□□□ -0.75
COL25A1-208ENST00000610288 SLC26A6Q9BXS9 759 aa10.35□□□□□ -0.75
COL25A1-208ENST00000610288 DNMT1P26358 1616 aaKnown RBP10.35□□□□□ -0.75
COL25A1-208ENST00000610288 ZNF521Q96K83 1311 aa10.34□□□□□ -0.75
COL25A1-208ENST00000610288 CETN2P41208 172 aa10.34□□□□□ -0.75
COL25A1-208ENST00000610288 EIF4A2Q14240 407 aaKnown RBP10.34□□□□□ -0.75
COL25A1-208ENST00000610288 CCDC96Q2M329 555 aa10.34□□□□□ -0.75
COL25A1-208ENST00000610288 RRAGBQ5VZM2 374 aa10.34□□□□□ -0.75
COL25A1-208ENST00000610288 CDC5LQ99459 802 aaKnown RBP10.34□□□□□ -0.75
COL25A1-208ENST00000610288 PLCH2O75038 1416 aa10.34□□□□□ -0.75
COL25A1-208ENST00000610288 UBA7P41226 1012 aa10.34□□□□□ -0.75
COL25A1-208ENST00000610288 FANCCQ00597 558 aa10.34□□□□□ -0.75
COL25A1-208ENST00000610288 COPS6Q7L5N1 327 aa10.34□□□□□ -0.75
COL25A1-208ENST00000610288 VEZTQ9HBM0 779 aa10.34□□□□□ -0.75
COL25A1-208ENST00000610288 ZNF219Q9P2Y4 722 aaPredicted RBP10.34□□□□□ -0.75
COL25A1-208ENST00000610288 ZBTB43O43298 467 aa10.34□□□□□ -0.75
COL25A1-208ENST00000610288 SEPT6Q14141 434 aa10.34□□□□□ -0.75
COL25A1-208ENST00000610288 TMEM266Q2M3C6 531 aa10.34□□□□□ -0.75
COL25A1-208ENST00000610288 ANKS4BQ8N8V4 417 aa10.34□□□□□ -0.75
COL25A1-208ENST00000610288 TM6SF1Q9BZW5 370 aa10.34□□□□□ -0.75
COL25A1-208ENST00000610288 BRD3Q15059 726 aa10.34□□□□□ -0.75
COL25A1-208ENST00000610288 MFSD6Q6ZSS7 791 aa10.34□□□□□ -0.75
COL25A1-208ENST00000610288 MRFAP1L1Q96HT8 127 aa10.34□□□□□ -0.75
COL25A1-208ENST00000610288 ZRANB1Q9UGI0 708 aa10.34□□□□□ -0.75
COL25A1-208ENST00000610288 TTF2Q9UNY4 1162 aaKnown RBP10.34□□□□□ -0.75
COL25A1-208ENST00000610288 TRIM35Q9UPQ4 493 aa10.34□□□□□ -0.75
COL25A1-208ENST00000610288 ASXL2Q76L83 1435 aa10.34□□□□□ -0.75
COL25A1-208ENST00000610288 RPS6KB1P23443 525 aa10.33□□□□□ -0.76
COL25A1-208ENST00000610288 PKP1Q13835 747 aa10.33□□□□□ -0.76
COL25A1-208ENST00000610288 KIAA1524Q8TCG1 905 aa10.33□□□□□ -0.76
COL25A1-208ENST00000610288 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.33□□□□□ -0.76
COL25A1-208ENST00000610288 TCP11L1Q9NUJ3 509 aa10.33□□□□□ -0.76
COL25A1-208ENST00000610288 A0A1B0GVL5 298 aa10.33□□□□□ -0.76
COL25A1-208ENST00000610288 GRM8O00222 908 aa10.33□□□□□ -0.76
COL25A1-208ENST00000610288 CPA1P15085 419 aa10.33□□□□□ -0.76
COL25A1-208ENST00000610288 SLC39A6Q13433 755 aa10.33□□□□□ -0.76
COL25A1-208ENST00000610288 NAPGQ99747 312 aaPredicted RBP10.33□□□□□ -0.76
COL25A1-208ENST00000610288 UBA5Q9GZZ9 404 aa10.33□□□□□ -0.76
COL25A1-208ENST00000610288 GUCA1BQ9UMX6 200 aa10.33□□□□□ -0.76
COL25A1-208ENST00000610288 RAPGEF6Q8TEU7 1601 aa10.33□□□□□ -0.76
COL25A1-208ENST00000610288 PPIP5K1Q6PFW1 1433 aa10.33□□□□□ -0.76
COL25A1-208ENST00000610288 ABCC2Q92887 1545 aa10.33□□□□□ -0.76
COL25A1-208ENST00000610288 MYO1BO43795 1136 aa10.33□□□□□ -0.76
COL25A1-208ENST00000610288 ATP2C2O75185 946 aa10.33□□□□□ -0.76
COL25A1-208ENST00000610288 RPGRQ92834 1020 aaKnown RBP10.33□□□□□ -0.76
COL25A1-208ENST00000610288 CTTNBP2Q8WZ74 1663 aa10.33□□□□□ -0.76
COL25A1-208ENST00000610288 A2MP01023 1474 aa10.33□□□□□ -0.76
COL25A1-208ENST00000610288 PSMA7O14818 248 aa10.33□□□□□ -0.76
COL25A1-208ENST00000610288 ZEB2O60315 1214 aa10.33□□□□□ -0.76
COL25A1-208ENST00000610288 GSPT1P15170 499 aaKnown RBP10.33□□□□□ -0.76
COL25A1-208ENST00000610288 AFMP43652 599 aa10.33□□□□□ -0.76
COL25A1-208ENST00000610288 ERCC6LQ2NKX8 1250 aa10.33□□□□□ -0.76
COL25A1-208ENST00000610288 FAM173BQ6P4H8 233 aa10.33□□□□□ -0.76
COL25A1-208ENST00000610288 KSR2Q6VAB6 950 aa10.33□□□□□ -0.76
COL25A1-208ENST00000610288 CCDC129Q6ZRS4 1044 aa10.33□□□□□ -0.76
COL25A1-208ENST00000610288 CCDC155Q8N6L0 562 aa10.33□□□□□ -0.76
COL25A1-208ENST00000610288 NUP153P49790 1475 aaKnown RBP10.32□□□□□ -0.76
COL25A1-208ENST00000610288 ERBB4Q15303 1308 aa10.32□□□□□ -0.76
COL25A1-208ENST00000610288 GSTTP1A0A1W2PQM5 241 aa10.32□□□□□ -0.76
COL25A1-208ENST00000610288 TSPY2A6NKD2 308 aa10.32□□□□□ -0.76
COL25A1-208ENST00000610288 ATP8B1O43520 1251 aa10.32□□□□□ -0.76
COL25A1-208ENST00000610288 ETF1P62495 437 aaKnown RBP10.32□□□□□ -0.76
COL25A1-208ENST00000610288 TNIP1Q15025 636 aa10.32□□□□□ -0.76
COL25A1-208ENST00000610288 CFAP58Q5T655 872 aa10.32□□□□□ -0.76
COL25A1-208ENST00000610288 SLF2Q8IX21 1173 aa10.32□□□□□ -0.76
COL25A1-208ENST00000610288 SECISBP2LQ93073 1101 aaKnown RBP10.32□□□□□ -0.76
COL25A1-208ENST00000610288 PHACTR3Q96KR7 559 aa10.32□□□□□ -0.76
COL25A1-208ENST00000610288 C6orf229H3BNL8 230 aa10.32□□□□□ -0.76
COL25A1-208ENST00000610288 NDUFAB1O14561 156 aa10.32□□□□□ -0.76
COL25A1-208ENST00000610288 NOP2P46087 812 aaKnown RBP10.32□□□□□ -0.76
COL25A1-208ENST00000610288 SH3BGRP55822 239 aaPredicted RBP10.32□□□□□ -0.76
COL25A1-208ENST00000610288 LRMPQ12912 555 aa10.32□□□□□ -0.76
COL25A1-208ENST00000610288 LMBR1LQ6UX01 489 aa10.32□□□□□ -0.76
COL25A1-208ENST00000610288 NCAPGQ9BPX3 1015 aa10.32□□□□□ -0.76
COL25A1-208ENST00000610288 PYCARDQ9ULZ3 195 aa10.32□□□□□ -0.76
COL25A1-208ENST00000610288 LDHCP07864 332 aa10.32□□□□□ -0.76
COL25A1-208ENST00000610288 UQCRFS1P1P0C7P4 283 aa10.32□□□□□ -0.76
COL25A1-208ENST00000610288 MTHFSDQ2M296 383 aaKnown RBP10.32□□□□□ -0.76
COL25A1-208ENST00000610288 LMNTD2Q8IXW0 634 aa10.32□□□□□ -0.76
COL25A1-208ENST00000610288 TMTC2Q8N394 836 aa10.32□□□□□ -0.76
COL25A1-208ENST00000610288 ADGRL2O95490 1459 aa10.31□□□□□ -0.76
COL25A1-208ENST00000610288 EFCAB8A8MWE9 144 aa10.31□□□□□ -0.76
COL25A1-208ENST00000610288 CCDC40Q4G0X9 1142 aa10.31□□□□□ -0.76
COL25A1-208ENST00000610288 RPUSD2Q8IZ73 545 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms