RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 AKR1B10O60218 316 aa16.27■□□□□ 0.2
PCDHB16-201ENST00000609684 WDR78Q5VTH9 848 aa16.27■□□□□ 0.2
PCDHB16-201ENST00000609684 NDUFB9Q9Y6M9 179 aa16.27■□□□□ 0.2
PCDHB16-201ENST00000609684 LIG1P18858 919 aa16.27■□□□□ 0.19
PCDHB16-201ENST00000609684 XAGE2Q96GT9 111 aa16.27■□□□□ 0.19
PCDHB16-201ENST00000609684 DESP17661 470 aa16.26■□□□□ 0.19
PCDHB16-201ENST00000609684 SAMM50Q9Y512 469 aa16.26■□□□□ 0.19
PCDHB16-201ENST00000609684 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.26■□□□□ 0.19
PCDHB16-201ENST00000609684 CALML3P27482 149 aa16.26■□□□□ 0.19
PCDHB16-201ENST00000609684 LTKP29376 864 aa16.26■□□□□ 0.19
PCDHB16-201ENST00000609684 PPP4R3BQ5MIZ7 849 aa16.26■□□□□ 0.19
PCDHB16-201ENST00000609684 DNAI1Q9UI46 699 aa16.26■□□□□ 0.19
PCDHB16-201ENST00000609684 PSMA7O14818 248 aa16.26■□□□□ 0.19
PCDHB16-201ENST00000609684 TBCAO75347 108 aaKnown RBP16.26■□□□□ 0.19
PCDHB16-201ENST00000609684 KRT2P35908 639 aa16.26■□□□□ 0.19
PCDHB16-201ENST00000609684 USP8P40818 1118 aa16.26■□□□□ 0.19
PCDHB16-201ENST00000609684 ASIC1P78348 528 aa16.26■□□□□ 0.19
PCDHB16-201ENST00000609684 SCLT1Q96NL6 688 aa16.26■□□□□ 0.19
PCDHB16-201ENST00000609684 TMCO5BA8MYB1 307 aa16.26■□□□□ 0.19
PCDHB16-201ENST00000609684 B4E1Z4 1266 aa16.26■□□□□ 0.19
PCDHB16-201ENST00000609684 MYO1BO43795 1136 aa16.26■□□□□ 0.19
PCDHB16-201ENST00000609684 FAM173BQ6P4H8 233 aa16.26■□□□□ 0.19
PCDHB16-201ENST00000609684 JADE2Q9NQC1 790 aa16.26■□□□□ 0.19
PCDHB16-201ENST00000609684 SH3TC1Q8TE82 1336 aa16.26■□□□□ 0.19
PCDHB16-201ENST00000609684 NEO1Q92859 1461 aa16.25■□□□□ 0.19
PCDHB16-201ENST00000609684 STXBP4Q6ZWJ1 553 aa16.25■□□□□ 0.19
PCDHB16-201ENST00000609684 SYCP3Q8IZU3 236 aa16.25■□□□□ 0.19
PCDHB16-201ENST00000609684 A0A1B0GVL5 298 aa16.25■□□□□ 0.19
PCDHB16-201ENST00000609684 POTEB2H3BUK9 544 aa16.25■□□□□ 0.19
PCDHB16-201ENST00000609684 NOP2P46087 812 aaKnown RBP16.25■□□□□ 0.19
PCDHB16-201ENST00000609684 IL17REQ8NFR9 667 aa16.25■□□□□ 0.19
PCDHB16-201ENST00000609684 ERMNQ8TAM6 284 aa16.25■□□□□ 0.19
PCDHB16-201ENST00000609684 KIF24Q5T7B8 1368 aa16.25■□□□□ 0.19
PCDHB16-201ENST00000609684 PTGS1P23219 599 aa16.25■□□□□ 0.19
PCDHB16-201ENST00000609684 CHMP4BP1P59074 171 aa16.25■□□□□ 0.19
PCDHB16-201ENST00000609684 KBTBD3Q8NAB2 608 aa16.25■□□□□ 0.19
PCDHB16-201ENST00000609684 NCOA5Q9HCD5 579 aaKnown RBP16.25■□□□□ 0.19
PCDHB16-201ENST00000609684 ERVK-7P63135 1459 aa16.25■□□□□ 0.19
PCDHB16-201ENST00000609684 APPBP2Q92624 585 aa16.24■□□□□ 0.19
PCDHB16-201ENST00000609684 C6orf50Q9HD87 102 aa16.24■□□□□ 0.19
PCDHB16-201ENST00000609684 DTNBO60941 627 aa16.24■□□□□ 0.19
PCDHB16-201ENST00000609684 USP44Q9H0E7 712 aa16.24■□□□□ 0.19
PCDHB16-201ENST00000609684 KDM5CP41229 1560 aa16.24■□□□□ 0.19
PCDHB16-201ENST00000609684 GSPT1P15170 499 aaKnown RBP16.24■□□□□ 0.19
PCDHB16-201ENST00000609684 ANKRD2Q9GZV1 360 aa16.24■□□□□ 0.19
PCDHB16-201ENST00000609684 KCNQ3O43525 872 aa16.24■□□□□ 0.19
PCDHB16-201ENST00000609684 LDHBP07195 334 aaKnown RBP16.24■□□□□ 0.19
PCDHB16-201ENST00000609684 IBSPP21815 317 aaPredicted RBP16.24■□□□□ 0.19
PCDHB16-201ENST00000609684 STX17P56962 302 aa16.24■□□□□ 0.19
PCDHB16-201ENST00000609684 PUM3Q15397 648 aaKnown RBP16.24■□□□□ 0.19
PCDHB16-201ENST00000609684 HS1BP3Q53T59 392 aa16.24■□□□□ 0.19
PCDHB16-201ENST00000609684 DDX17Q92841 729 aaKnown RBP16.24■□□□□ 0.19
PCDHB16-201ENST00000609684 RBSNQ9H1K0 784 aa16.24■□□□□ 0.19
PCDHB16-201ENST00000609684 MYO5CQ9NQX4 1742 aa16.24■□□□□ 0.19
PCDHB16-201ENST00000609684 YEATS2Q9ULM3 1422 aa16.23■□□□□ 0.19
PCDHB16-201ENST00000609684 MACROD2A1Z1Q3 448 aa16.23■□□□□ 0.19
PCDHB16-201ENST00000609684 ATL3Q6DD88 541 aa16.23■□□□□ 0.19
PCDHB16-201ENST00000609684 GPAA1O43292 621 aa16.23■□□□□ 0.19
PCDHB16-201ENST00000609684 MCM7P33993 719 aa16.23■□□□□ 0.19
PCDHB16-201ENST00000609684 HLTFQ14527 1009 aaKnown RBP eCLIP16.23■□□□□ 0.19
PCDHB16-201ENST00000609684 ZC3H12CQ9C0D7 883 aaKnown RBP16.23■□□□□ 0.19
PCDHB16-201ENST00000609684 CCDC113Q9H0I3 377 aa16.23■□□□□ 0.19
PCDHB16-201ENST00000609684 GOLGA6L7A0A1B0GV03 622 aa16.23■□□□□ 0.19
PCDHB16-201ENST00000609684 DCAF8L1A6NGE4 600 aa16.23■□□□□ 0.19
PCDHB16-201ENST00000609684 EHBP1Q8NDI1 1231 aa16.23■□□□□ 0.19
PCDHB16-201ENST00000609684 PLEKHF1Q96S99 279 aa16.23■□□□□ 0.19
PCDHB16-201ENST00000609684 IFNKQ9P0W0 207 aa16.23■□□□□ 0.19
PCDHB16-201ENST00000609684 ABCA8O94911 1581 aa16.23■□□□□ 0.19
PCDHB16-201ENST00000609684 SAMD9LQ8IVG5 1584 aa16.23■□□□□ 0.19
PCDHB16-201ENST00000609684 HSPA4P34932 840 aa16.23■□□□□ 0.19
PCDHB16-201ENST00000609684 FAM160A1Q05DH4 1040 aa16.23■□□□□ 0.19
PCDHB16-201ENST00000609684 KRI1Q8N9T8 703 aaKnown RBP16.23■□□□□ 0.19
PCDHB16-201ENST00000609684 NAA15Q9BXJ9 866 aaKnown RBP16.23■□□□□ 0.19
PCDHB16-201ENST00000609684 PDE8AO60658 829 aa16.22■□□□□ 0.19
PCDHB16-201ENST00000609684 ARMT1Q9H993 441 aa16.22■□□□□ 0.19
PCDHB16-201ENST00000609684 SPDYE4A6NLX3 237 aa16.22■□□□□ 0.19
PCDHB16-201ENST00000609684 PLCG2P16885 1265 aa16.22■□□□□ 0.19
PCDHB16-201ENST00000609684 DNAJC10Q8IXB1 793 aa16.22■□□□□ 0.19
PCDHB16-201ENST00000609684 SPAG5Q96R06 1193 aa16.22■□□□□ 0.19
PCDHB16-201ENST00000609684 CYLC1P35663 651 aaPredicted RBP16.22■□□□□ 0.19
PCDHB16-201ENST00000609684 IFFO1Q0D2I5 559 aa16.22■□□□□ 0.19
PCDHB16-201ENST00000609684 RRP36Q96EU6 259 aaKnown RBP16.22■□□□□ 0.19
PCDHB16-201ENST00000609684 PRPF4BQ13523 1007 aaKnown RBP16.22■□□□□ 0.19
PCDHB16-201ENST00000609684 PARP10Q53GL7 1025 aa16.22■□□□□ 0.19
PCDHB16-201ENST00000609684 TRMT2AQ8IZ69 625 aaKnown RBP16.22■□□□□ 0.19
PCDHB16-201ENST00000609684 MMRN2Q9H8L6 949 aa16.22■□□□□ 0.19
PCDHB16-201ENST00000609684 RNF216Q9NWF9 866 aaPredicted RBP16.22■□□□□ 0.19
PCDHB16-201ENST00000609684 DENND2AQ9ULE3 1009 aa16.22■□□□□ 0.19
PCDHB16-201ENST00000609684 GNPATO15228 680 aa16.21■□□□□ 0.19
PCDHB16-201ENST00000609684 TTLL12Q14166 644 aaPredicted RBP16.21■□□□□ 0.19
PCDHB16-201ENST00000609684 SSH3Q8TE77 659 aa16.21■□□□□ 0.19
PCDHB16-201ENST00000609684 CTNNBL1Q8WYA6 563 aaPredicted RBP16.21■□□□□ 0.19
PCDHB16-201ENST00000609684 GOPCQ9HD26 462 aa16.21■□□□□ 0.19
PCDHB16-201ENST00000609684 GIGYF1O75420 1035 aaPredicted RBP16.21■□□□□ 0.19
PCDHB16-201ENST00000609684 GBP2P32456 591 aaPredicted RBP16.21■□□□□ 0.19
PCDHB16-201ENST00000609684 TNNI2P48788 182 aa16.21■□□□□ 0.19
PCDHB16-201ENST00000609684 TMEM87BQ96K49 555 aa16.21■□□□□ 0.19
PCDHB16-201ENST00000609684 LLPHQ9BRT6 129 aaKnown RBP16.21■□□□□ 0.19
PCDHB16-201ENST00000609684 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.21■□□□□ 0.19
PCDHB16-201ENST00000609684 ANGEL1Q9UNK9 670 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms